RNA–Protein interactions for RNA: ENST00000557843.5

TCF12-207, Transcript of transcription factor 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TCF12, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-207ENST00000557843 NISCHQ9Y2I1 1504 aa13.58□□□□□ -0.24
TCF12-207ENST00000557843 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
TCF12-207ENST00000557843 SHROOM4Q9ULL8 1493 aa12.58□□□□□ -0.39
TCF12-207ENST00000557843 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
TCF12-207ENST00000557843 HRCP23327 699 aa12.36□□□□□ -0.43
TCF12-207ENST00000557843 PPARGC1BQ86YN6 1023 aaKnown RBP12.27□□□□□ -0.45
TCF12-207ENST00000557843 DCAF8L2P0C7V8 631 aa12.21□□□□□ -0.45
TCF12-207ENST00000557843 CHIC1Q5VXU3 224 aa12.06□□□□□ -0.48
TCF12-207ENST00000557843 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
TCF12-207ENST00000557843 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
TCF12-207ENST00000557843 MYO15BQ96JP2 1530 aa11.9□□□□□ -0.5
TCF12-207ENST00000557843 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
TCF12-207ENST00000557843 TRIM26Q12899 539 aaPredicted RBP11.83□□□□□ -0.52
TCF12-207ENST00000557843 FAM9AQ8IZU1 332 aaPredicted RBP11.76□□□□□ -0.53
TCF12-207ENST00000557843 ZEB1P37275 1124 aaPredicted RBP11.74□□□□□ -0.53
TCF12-207ENST00000557843 SCAF1Q9H7N4 1312 aaKnown RBP11.67□□□□□ -0.54
TCF12-207ENST00000557843 DCAF1Q9Y4B6 1507 aa11.6□□□□□ -0.55
TCF12-207ENST00000557843 TRIM41Q8WV44 630 aa11.58□□□□□ -0.56
TCF12-207ENST00000557843 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
TCF12-207ENST00000557843 CCER1Q8TC90 406 aaPredicted RBP11.55□□□□□ -0.56
TCF12-207ENST00000557843 CENPBP07199 599 aaPredicted RBP11.52□□□□□ -0.57
TCF12-207ENST00000557843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
TCF12-207ENST00000557843 GTF3C3Q9Y5Q9 886 aa11.48□□□□□ -0.57
TCF12-207ENST00000557843 ZCCHC6Q5VYS8 1495 aaKnown RBP11.46□□□□□ -0.57
TCF12-207ENST00000557843 ACIN1Q9UKV3 1341 aaKnown RBP11.46□□□□□ -0.58
TCF12-207ENST00000557843 YTHDC1Q96MU7 727 aaKnown RBP11.46□□□□□ -0.58
TCF12-207ENST00000557843 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
TCF12-207ENST00000557843 MYT1Q01538 1121 aa11.43□□□□□ -0.58
TCF12-207ENST00000557843 DIEXFQ68CQ4 756 aaKnown RBP11.4□□□□□ -0.58
TCF12-207ENST00000557843 CCDC180Q9P1Z9 1646 aa11.37□□□□□ -0.59
TCF12-207ENST00000557843 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
TCF12-207ENST00000557843 UBTFP17480 764 aaKnown RBP11.11□□□□□ -0.63
TCF12-207ENST00000557843 HNRNPUL2Q1KMD3 747 aaKnown RBP11.11□□□□□ -0.63
TCF12-207ENST00000557843 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
TCF12-207ENST00000557843 MIER1Q8N108 512 aa11.06□□□□□ -0.64
TCF12-207ENST00000557843 APLP2Q06481 763 aa11.02□□□□□ -0.65
TCF12-207ENST00000557843 RSF1Q96T23 1441 aaPredicted RBP11.02□□□□□ -0.65
TCF12-207ENST00000557843 BCANQ96GW7 911 aa10.92□□□□□ -0.66
TCF12-207ENST00000557843 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
TCF12-207ENST00000557843 RB1CC1Q8TDY2 1594 aa10.91□□□□□ -0.66
TCF12-207ENST00000557843 ABCC9O60706 1549 aa10.85□□□□□ -0.67
TCF12-207ENST00000557843 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
TCF12-207ENST00000557843 SUPT16HQ9Y5B9 1047 aaKnown RBP10.82□□□□□ -0.68
TCF12-207ENST00000557843 CEP162Q5TB80 1403 aa10.81□□□□□ -0.68
TCF12-207ENST00000557843 ITGAEP38570 1179 aa10.81□□□□□ -0.68
TCF12-207ENST00000557843 NEFLP07196 543 aa10.79□□□□□ -0.68
TCF12-207ENST00000557843 ANP32EQ9BTT0 268 aa10.78□□□□□ -0.68
TCF12-207ENST00000557843 ERICH6Q7L0X2 663 aa10.75□□□□□ -0.69
TCF12-207ENST00000557843 CECR2Q9BXF3 1484 aa10.75□□□□□ -0.69
TCF12-207ENST00000557843 BCL11AQ9H165 835 aa10.74□□□□□ -0.69
TCF12-207ENST00000557843 FKBP8Q14318 412 aa10.74□□□□□ -0.69
TCF12-207ENST00000557843 TSHZ2Q9NRE2 1034 aa10.74□□□□□ -0.69
TCF12-207ENST00000557843 CLSPNQ9HAW4 1339 aa10.7□□□□□ -0.7
TCF12-207ENST00000557843 SOGA1O94964 1423 aa10.69□□□□□ -0.7
TCF12-207ENST00000557843 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
TCF12-207ENST00000557843 MROH2BQ7Z745 1585 aa10.67□□□□□ -0.7
TCF12-207ENST00000557843 CCDC88BA6NC98 1476 aa10.66□□□□□ -0.7
TCF12-207ENST00000557843 ABCC8Q09428 1581 aa10.65□□□□□ -0.7
TCF12-207ENST00000557843 WRNQ14191 1432 aaPredicted RBP eCLIP10.64□□□□□ -0.71
TCF12-207ENST00000557843 DDX10Q13206 875 aaKnown RBP10.63□□□□□ -0.71
TCF12-207ENST00000557843 KCNH8Q96L42 1107 aa10.63□□□□□ -0.71
TCF12-207ENST00000557843 TRIM52Q96A61 297 aa10.62□□□□□ -0.71
TCF12-207ENST00000557843 ATP1B4Q9UN42 357 aaPredicted RBP10.6□□□□□ -0.71
TCF12-207ENST00000557843 CLIP1P30622 1438 aa10.6□□□□□ -0.71
TCF12-207ENST00000557843 WIZO95785 1651 aa10.59□□□□□ -0.71
TCF12-207ENST00000557843 HIRIP3Q9BW71 556 aaPredicted RBP10.58□□□□□ -0.71
TCF12-207ENST00000557843 RUSC2Q8N2Y8 1516 aa10.58□□□□□ -0.72
TCF12-207ENST00000557843 GOLGA3Q08378 1498 aa10.57□□□□□ -0.72
TCF12-207ENST00000557843 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
TCF12-207ENST00000557843 IRX6P78412 446 aaPredicted RBP10.54□□□□□ -0.72
TCF12-207ENST00000557843 ANP32CO43423 234 aa10.53□□□□□ -0.72
TCF12-207ENST00000557843 EEA1Q15075 1411 aa10.51□□□□□ -0.73
TCF12-207ENST00000557843 CDK11AQ9UQ88 783 aaPredicted RBP10.51□□□□□ -0.73
TCF12-207ENST00000557843 FAM50AQ14320 339 aaKnown RBP10.5□□□□□ -0.73
TCF12-207ENST00000557843 PABPN1Q86U42 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
TCF12-207ENST00000557843 DHX57Q6P158 1386 aaKnown RBP10.47□□□□□ -0.73
TCF12-207ENST00000557843 KANK4Q5T7N3 995 aaPredicted RBP10.47□□□□□ -0.73
TCF12-207ENST00000557843 VPS8Q8N3P4 1428 aa10.46□□□□□ -0.73
TCF12-207ENST00000557843 CNGB1Q14028 1251 aaPredicted RBP10.45□□□□□ -0.74
TCF12-207ENST00000557843 SIN3AQ96ST3 1273 aa10.45□□□□□ -0.74
TCF12-207ENST00000557843 CEP164Q9UPV0 1460 aa10.45□□□□□ -0.74
TCF12-207ENST00000557843 HNRNPUQ00839 825 aaKnown RBP eCLIP10.45□□□□□ -0.74
TCF12-207ENST00000557843 BAZ1AQ9NRL2 1556 aaPredicted RBP10.41□□□□□ -0.74
TCF12-207ENST00000557843 NBR1Q14596 966 aa10.41□□□□□ -0.74
TCF12-207ENST00000557843 P3H3Q8IVL6 736 aa10.36□□□□□ -0.75
TCF12-207ENST00000557843 RAPGEF2Q9Y4G8 1499 aa10.36□□□□□ -0.75
TCF12-207ENST00000557843 NACADO15069 1562 aa10.34□□□□□ -0.75
TCF12-207ENST00000557843 RTL5Q5HYW3 569 aaPredicted RBP10.34□□□□□ -0.75
TCF12-207ENST00000557843 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
TCF12-207ENST00000557843 TOP2AP11388 1531 aaKnown RBP10.34□□□□□ -0.75
TCF12-207ENST00000557843 MSH5O43196 834 aa10.33□□□□□ -0.76
TCF12-207ENST00000557843 POLR3GLQ9BT43 218 aa10.33□□□□□ -0.76
TCF12-207ENST00000557843 DEKP35659 375 aaKnown RBP10.32□□□□□ -0.76
TCF12-207ENST00000557843 FAM9BQ8IZU0 186 aa10.32□□□□□ -0.76
TCF12-207ENST00000557843 RAB3GAP2Q9H2M9 1393 aa10.32□□□□□ -0.76
TCF12-207ENST00000557843 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
TCF12-207ENST00000557843 TONSLQ96HA7 1378 aa10.3□□□□□ -0.76
TCF12-207ENST00000557843 SMARCA2P51531 1590 aa10.3□□□□□ -0.76
TCF12-207ENST00000557843 CCER2I3L3R5 266 aa10.29□□□□□ -0.76
TCF12-207ENST00000557843 SENP3-EIF4A1A0A087X0R7 540 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms