RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 MYT1Q01538 1121 aa9.88□□□□□ -0.83
TNRC6B-202ENST00000335727 PELP1Q8IZL8 1130 aaKnown RBP9.62□□□□□ -0.87
TNRC6B-202ENST00000335727 TTBK1Q5TCY1 1321 aaPredicted RBP9.35□□□□□ -0.91
TNRC6B-202ENST00000335727 ERICH6Q7L0X2 663 aa8.91□□□□□ -0.98
TNRC6B-202ENST00000335727 YTHDC1Q96MU7 727 aaKnown RBP8.43□□□□□ -1.06
TNRC6B-202ENST00000335727 CENPBP07199 599 aaPredicted RBP8.41□□□□□ -1.06
TNRC6B-202ENST00000335727 SLC24A1O60721 1099 aa8.41□□□□□ -1.06
TNRC6B-202ENST00000335727 CCER1Q8TC90 406 aaPredicted RBP8.38□□□□□ -1.07
TNRC6B-202ENST00000335727 RANGAP1P46060 587 aaPredicted RBP8.37□□□□□ -1.07
TNRC6B-202ENST00000335727 ZEB1P37275 1124 aaPredicted RBP8.27□□□□□ -1.09
TNRC6B-202ENST00000335727 MYT1LQ9UL68 1186 aa8.19□□□□□ -1.1
TNRC6B-202ENST00000335727 GLIPR1L2Q4G1C9 344 aa8.18□□□□□ -1.1
TNRC6B-202ENST00000335727 CLSPNQ9HAW4 1339 aa8.04□□□□□ -1.12
TNRC6B-202ENST00000335727 EHMT2Q96KQ7 1210 aa8.02□□□□□ -1.13
TNRC6B-202ENST00000335727 DAXXQ9UER7 740 aaPredicted RBP8.01□□□□□ -1.13
TNRC6B-202ENST00000335727 FAM9AQ8IZU1 332 aaPredicted RBP8□□□□□ -1.13
TNRC6B-202ENST00000335727 HRCP23327 699 aa7.98□□□□□ -1.13
TNRC6B-202ENST00000335727 EIF5BO60841 1220 aaKnown RBP7.95□□□□□ -1.14
TNRC6B-202ENST00000335727 NEFLP07196 543 aa7.86□□□□□ -1.15
TNRC6B-202ENST00000335727 DCAF8L2P0C7V8 631 aa7.84□□□□□ -1.15
TNRC6B-202ENST00000335727 BCL11AQ9H165 835 aa7.83□□□□□ -1.16
TNRC6B-202ENST00000335727 RTL5Q5HYW3 569 aaPredicted RBP7.82□□□□□ -1.16
TNRC6B-202ENST00000335727 APLP2Q06481 763 aa7.8□□□□□ -1.16
TNRC6B-202ENST00000335727 ZNF326Q5BKZ1 582 aaKnown RBP7.75□□□□□ -1.17
TNRC6B-202ENST00000335727 ERICH6BQ5W0A0 696 aa7.71□□□□□ -1.18
TNRC6B-202ENST00000335727 PRKCSHP14314 528 aaPredicted RBP7.7□□□□□ -1.18
TNRC6B-202ENST00000335727 NCLP19338 710 aaKnown RBP7.7□□□□□ -1.18
TNRC6B-202ENST00000335727 PCGF6Q9BYE7 350 aa7.69□□□□□ -1.18
TNRC6B-202ENST00000335727 ANP32EQ9BTT0 268 aa7.67□□□□□ -1.18
TNRC6B-202ENST00000335727 ACIN1Q9UKV3 1341 aaKnown RBP7.65□□□□□ -1.18
TNRC6B-202ENST00000335727 POLR3GLQ9BT43 218 aa7.64□□□□□ -1.19
TNRC6B-202ENST00000335727 ZNF316A6NFI3 1004 aaPredicted RBP7.62□□□□□ -1.19
TNRC6B-202ENST00000335727 GTF3C3Q9Y5Q9 886 aa7.6□□□□□ -1.19
TNRC6B-202ENST00000335727 ARXQ96QS3 562 aa7.59□□□□□ -1.19
TNRC6B-202ENST00000335727 HMGB1P09429 215 aaKnown RBP7.56□□□□□ -1.2
TNRC6B-202ENST00000335727 TNNT2P45379 298 aaPredicted RBP7.56□□□□□ -1.2
TNRC6B-202ENST00000335727 TRIM26Q12899 539 aaPredicted RBP7.55□□□□□ -1.2
TNRC6B-202ENST00000335727 NCBP3Q53F19 620 aaKnown RBP7.53□□□□□ -1.2
TNRC6B-202ENST00000335727 PTMSP20962 102 aa7.51□□□□□ -1.21
TNRC6B-202ENST00000335727 TRIM44Q96DX7 344 aaPredicted RBP7.5□□□□□ -1.21
TNRC6B-202ENST00000335727 ANP32BQ92688 251 aaKnown RBP7.49□□□□□ -1.21
TNRC6B-202ENST00000335727 HOMEZQ8IX15 550 aa7.48□□□□□ -1.21
TNRC6B-202ENST00000335727 SCAF1Q9H7N4 1312 aaKnown RBP7.48□□□□□ -1.21
TNRC6B-202ENST00000335727 PODXL2Q9NZ53 605 aa7.47□□□□□ -1.21
TNRC6B-202ENST00000335727 DIEXFQ68CQ4 756 aaKnown RBP7.46□□□□□ -1.21
TNRC6B-202ENST00000335727 AMER1Q5JTC6 1135 aaPredicted RBP7.45□□□□□ -1.22
TNRC6B-202ENST00000335727 CDK11AQ9UQ88 783 aaPredicted RBP7.43□□□□□ -1.22
TNRC6B-202ENST00000335727 SUPT5HO00267 1087 aaKnown RBP7.43□□□□□ -1.22
TNRC6B-202ENST00000335727 PKNOX2Q96KN3 472 aa7.43□□□□□ -1.22
TNRC6B-202ENST00000335727 ANP32AP39687 249 aaKnown RBP7.42□□□□□ -1.22
TNRC6B-202ENST00000335727 RSPH6AQ9H0K4 717 aa7.4□□□□□ -1.22
TNRC6B-202ENST00000335727 CDK11BP21127 795 aaKnown RBP7.39□□□□□ -1.23
TNRC6B-202ENST00000335727 UBE2Q2Q8WVN8 375 aa7.38□□□□□ -1.23
TNRC6B-202ENST00000335727 CNGB1Q14028 1251 aaPredicted RBP7.37□□□□□ -1.23
TNRC6B-202ENST00000335727 ARID4BQ4LE39 1312 aaPredicted RBP7.36□□□□□ -1.23
TNRC6B-202ENST00000335727 LAS1LQ9Y4W2 734 aaKnown RBP7.36□□□□□ -1.23
TNRC6B-202ENST00000335727 CCDC180Q9P1Z9 1646 aa7.33□□□□□ -1.24
TNRC6B-202ENST00000335727 DCAF1Q9Y4B6 1507 aa7.29□□□□□ -1.24
TNRC6B-202ENST00000335727 NEFMP07197 916 aa7.29□□□□□ -1.24
TNRC6B-202ENST00000335727 NAP1L5Q96NT1 182 aaPredicted RBP7.28□□□□□ -1.24
TNRC6B-202ENST00000335727 CALRP27797 417 aaKnown RBP7.26□□□□□ -1.25
TNRC6B-202ENST00000335727 TAF7LQ5H9L4 462 aa7.26□□□□□ -1.25
TNRC6B-202ENST00000335727 NPM2Q86SE8 214 aaKnown RBP7.24□□□□□ -1.25
TNRC6B-202ENST00000335727 NISCHQ9Y2I1 1504 aa7.24□□□□□ -1.25
TNRC6B-202ENST00000335727 PDE4CQ08493 712 aa7.24□□□□□ -1.25
TNRC6B-202ENST00000335727 SHROOM4Q9ULL8 1493 aa7.23□□□□□ -1.25
TNRC6B-202ENST00000335727 HSP90AA1P07900 732 aaKnown RBP7.23□□□□□ -1.25
TNRC6B-202ENST00000335727 HSP90B1P14625 803 aaKnown RBP7.22□□□□□ -1.25
TNRC6B-202ENST00000335727 PPARGC1BQ86YN6 1023 aaKnown RBP7.22□□□□□ -1.25
TNRC6B-202ENST00000335727 NEUROD1Q13562 356 aa7.21□□□□□ -1.25
TNRC6B-202ENST00000335727 C14orf37Q86TY3 774 aa7.21□□□□□ -1.26
TNRC6B-202ENST00000335727 PPM1GO15355 546 aaPredicted RBP7.2□□□□□ -1.26
TNRC6B-202ENST00000335727 HSP90AA2PQ14568 343 aaPredicted RBP7.2□□□□□ -1.26
TNRC6B-202ENST00000335727 DEKP35659 375 aaKnown RBP7.2□□□□□ -1.26
TNRC6B-202ENST00000335727 BCANQ96GW7 911 aa7.19□□□□□ -1.26
TNRC6B-202ENST00000335727 USP35Q9P2H5 1018 aa7.19□□□□□ -1.26
TNRC6B-202ENST00000335727 FBXO3Q9UK99 471 aa7.19□□□□□ -1.26
TNRC6B-202ENST00000335727 TAF3Q5VWG9 929 aa7.19□□□□□ -1.26
TNRC6B-202ENST00000335727 MTERF4Q7Z6M4 381 aaKnown RBP7.18□□□□□ -1.26
TNRC6B-202ENST00000335727 A0A0U1RQG5 324 aaPredicted RBP7.18□□□□□ -1.26
TNRC6B-202ENST00000335727 ZBTB47Q9UFB7 747 aaPredicted RBP7.18□□□□□ -1.26
TNRC6B-202ENST00000335727 PTMAP06454 111 aaKnown RBP7.17□□□□□ -1.26
TNRC6B-202ENST00000335727 PDIA4P13667 645 aaKnown RBP7.17□□□□□ -1.26
TNRC6B-202ENST00000335727 CSRNP3Q8WYN3 585 aa7.17□□□□□ -1.26
TNRC6B-202ENST00000335727 BRD2P25440 801 aaKnown RBP7.16□□□□□ -1.26
TNRC6B-202ENST00000335727 DDRGK1Q96HY6 314 aa7.15□□□□□ -1.26
TNRC6B-202ENST00000335727 TULP1O00294 542 aaPredicted RBP7.15□□□□□ -1.27
TNRC6B-202ENST00000335727 VSIG10Q8N0Z9 540 aa7.14□□□□□ -1.27
TNRC6B-202ENST00000335727 CANXP27824 592 aaKnown RBP7.13□□□□□ -1.27
TNRC6B-202ENST00000335727 MAP7D2Q96T17 732 aa7.13□□□□□ -1.27
TNRC6B-202ENST00000335727 L1TD1Q5T7N2 865 aaKnown RBP7.13□□□□□ -1.27
TNRC6B-202ENST00000335727 APPP05067 770 aa7.13□□□□□ -1.27
TNRC6B-202ENST00000335727 ARID3AQ99856 593 aa7.13□□□□□ -1.27
TNRC6B-202ENST00000335727 RRP9O43818 475 aaKnown RBP7.11□□□□□ -1.27
TNRC6B-202ENST00000335727 CCDC136Q96JN2 1154 aa7.11□□□□□ -1.27
TNRC6B-202ENST00000335727 NOP58Q9Y2X3 529 aaKnown RBP7.11□□□□□ -1.27
TNRC6B-202ENST00000335727 PNNQ9H307 717 aaKnown RBP7.09□□□□□ -1.27
TNRC6B-202ENST00000335727 GOLGA6L3A6NEY3 463 aa7.07□□□□□ -1.28
TNRC6B-202ENST00000335727 NBR1Q14596 966 aa7.07□□□□□ -1.28
TNRC6B-202ENST00000335727 AXDND1Q5T1B0 1012 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms