Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 AC103724.3-201ENST00000564481 992 ntBASIC20.65■□□□□ 0.9
ARFGEF3Q5TH69 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGEF3Q5TH69 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGEF3Q5TH69 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGEF3Q5TH69 AC009299.2-201ENST00000482477 511 ntBASIC20.65■□□□□ 0.9
ARFGEF3Q5TH69 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.65■□□□□ 0.9
ARFGEF3Q5TH69 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.64■□□□□ 0.9
ARFGEF3Q5TH69 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGEF3Q5TH69 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.64■□□□□ 0.89
ARFGEF3Q5TH69 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.63■□□□□ 0.89
ARFGEF3Q5TH69 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.63■□□□□ 0.89
ARFGEF3Q5TH69 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF3Q5TH69 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ARFGEF3Q5TH69 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF3Q5TH69 AC142086.6-201ENST00000621154 1765 ntBASIC20.63■□□□□ 0.89
ARFGEF3Q5TH69 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ARFGEF3Q5TH69 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF3Q5TH69 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF3Q5TH69 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF3Q5TH69 AC142472.1-201ENST00000612013 1741 ntBASIC20.62■□□□□ 0.89
ARFGEF3Q5TH69 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF3Q5TH69 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGEF3Q5TH69 AL035685.1-201ENST00000636663 812 ntBASIC20.62■□□□□ 0.89
ARFGEF3Q5TH69 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ARFGEF3Q5TH69 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.61■□□□□ 0.89
ARFGEF3Q5TH69 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF3Q5TH69 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF3Q5TH69 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF3Q5TH69 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF3Q5TH69 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF3Q5TH69 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGEF3Q5TH69 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ARFGEF3Q5TH69 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.6■□□□□ 0.89
ARFGEF3Q5TH69 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF3Q5TH69 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF3Q5TH69 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.6■□□□□ 0.89
ARFGEF3Q5TH69 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ARFGEF3Q5TH69 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.6■□□□□ 0.89
ARFGEF3Q5TH69 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF3Q5TH69 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF3Q5TH69 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARFGEF3Q5TH69 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.59■□□□□ 0.89
ARFGEF3Q5TH69 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF3Q5TH69 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.59■□□□□ 0.89
ARFGEF3Q5TH69 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ARFGEF3Q5TH69 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.59■□□□□ 0.89
ARFGEF3Q5TH69 BHLHE23-202ENST00000612929 1109 ntBASIC20.59■□□□□ 0.89
ARFGEF3Q5TH69 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF3Q5TH69 AC087393.1-201ENST00000582896 145 ntBASIC20.58■□□□□ 0.89
ARFGEF3Q5TH69 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARFGEF3Q5TH69 KRT8P33-201ENST00000508125 1423 ntBASIC20.58■□□□□ 0.88
ARFGEF3Q5TH69 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARFGEF3Q5TH69 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF3Q5TH69 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.57■□□□□ 0.88
ARFGEF3Q5TH69 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.57■□□□□ 0.88
ARFGEF3Q5TH69 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF3Q5TH69 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF3Q5TH69 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
ARFGEF3Q5TH69 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF3Q5TH69 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF3Q5TH69 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF3Q5TH69 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ARFGEF3Q5TH69 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.56■□□□□ 0.88
ARFGEF3Q5TH69 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF3Q5TH69 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.56■□□□□ 0.88
ARFGEF3Q5TH69 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF3Q5TH69 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF3Q5TH69 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.55■□□□□ 0.88
ARFGEF3Q5TH69 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGEF3Q5TH69 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.55■□□□□ 0.88
ARFGEF3Q5TH69 AC018755.3-202ENST00000596210 929 ntBASIC20.55■□□□□ 0.88
ARFGEF3Q5TH69 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGEF3Q5TH69 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGEF3Q5TH69 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ARFGEF3Q5TH69 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGEF3Q5TH69 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.55■□□□□ 0.88
ARFGEF3Q5TH69 AC103834.1-201ENST00000520383 144 ntBASIC20.55■□□□□ 0.88
ARFGEF3Q5TH69 AP004609.3-201ENST00000610705 1884 ntBASIC20.54■□□□□ 0.88
ARFGEF3Q5TH69 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ARFGEF3Q5TH69 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGEF3Q5TH69 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGEF3Q5TH69 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGEF3Q5TH69 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGEF3Q5TH69 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGEF3Q5TH69 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARFGEF3Q5TH69 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARFGEF3Q5TH69 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARFGEF3Q5TH69 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.52■□□□□ 0.88
ARFGEF3Q5TH69 RPS2P7-201ENST00000447334 885 ntBASIC20.52■□□□□ 0.88
ARFGEF3Q5TH69 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ARFGEF3Q5TH69 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ARFGEF3Q5TH69 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.52■□□□□ 0.87
ARFGEF3Q5TH69 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
ARFGEF3Q5TH69 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.51■□□□□ 0.87
ARFGEF3Q5TH69 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF3Q5TH69 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ARFGEF3Q5TH69 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF3Q5TH69 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.51■□□□□ 0.87
ARFGEF3Q5TH69 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF3Q5TH69 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms