Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.66■□□□□ 0.74
SAA4P35542 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.66■□□□□ 0.74
SAA4P35542 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SAA4P35542 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SAA4P35542 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.65■□□□□ 0.74
SAA4P35542 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SAA4P35542 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SAA4P35542 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SAA4P35542 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SAA4P35542 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SAA4P35542 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.64■□□□□ 0.73
SAA4P35542 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SAA4P35542 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SAA4P35542 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.63■□□□□ 0.73
SAA4P35542 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SAA4P35542 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.63■□□□□ 0.73
SAA4P35542 BHLHE23-202ENST00000612929 1109 ntBASIC19.63■□□□□ 0.73
SAA4P35542 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SAA4P35542 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SAA4P35542 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SAA4P35542 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.62■□□□□ 0.73
SAA4P35542 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.62■□□□□ 0.73
SAA4P35542 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SAA4P35542 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA4P35542 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA4P35542 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA4P35542 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA4P35542 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SAA4P35542 AC139795.1-202ENST00000500444 432 ntBASIC19.61■□□□□ 0.73
SAA4P35542 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA4P35542 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SAA4P35542 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA4P35542 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA4P35542 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA4P35542 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SAA4P35542 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SAA4P35542 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SAA4P35542 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SAA4P35542 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.6■□□□□ 0.73
SAA4P35542 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAA4P35542 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.6■□□□□ 0.73
SAA4P35542 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAA4P35542 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA4P35542 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SAA4P35542 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SAA4P35542 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.59■□□□□ 0.73
SAA4P35542 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
SAA4P35542 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA4P35542 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.59■□□□□ 0.73
SAA4P35542 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA4P35542 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SAA4P35542 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SAA4P35542 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.58■□□□□ 0.72
SAA4P35542 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.58■□□□□ 0.72
SAA4P35542 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SAA4P35542 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
SAA4P35542 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SAA4P35542 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SAA4P35542 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.57■□□□□ 0.72
SAA4P35542 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.57■□□□□ 0.72
SAA4P35542 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.57■□□□□ 0.72
SAA4P35542 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SAA4P35542 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SAA4P35542 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
SAA4P35542 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SAA4P35542 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SAA4P35542 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SAA4P35542 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SAA4P35542 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SAA4P35542 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.55■□□□□ 0.72
SAA4P35542 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.55■□□□□ 0.72
SAA4P35542 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
SAA4P35542 AC010980.1-201ENST00000587192 1142 ntBASIC19.55■□□□□ 0.72
SAA4P35542 AC074183.2-201ENST00000623112 922 ntBASIC19.55■□□□□ 0.72
SAA4P35542 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.55■□□□□ 0.72
SAA4P35542 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA4P35542 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SAA4P35542 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SAA4P35542 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SAA4P35542 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SAA4P35542 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SAA4P35542 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SAA4P35542 AL121749.1-202ENST00000609313 2153 ntBASIC19.53■□□□□ 0.72
SAA4P35542 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SAA4P35542 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SAA4P35542 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SAA4P35542 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SAA4P35542 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.52■□□□□ 0.72
SAA4P35542 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.52■□□□□ 0.72
SAA4P35542 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.52■□□□□ 0.72
SAA4P35542 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SAA4P35542 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SAA4P35542 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SAA4P35542 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
SAA4P35542 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SAA4P35542 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SAA4P35542 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SAA4P35542 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SAA4P35542 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SAA4P35542 KRT18P10-201ENST00000388836 1287 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms