Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
TBC1D4O60343 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D4O60343 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D4O60343 KRT8P33-201ENST00000508125 1423 ntBASIC25.8■■□□□ 1.72
TBC1D4O60343 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
TBC1D4O60343 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
TBC1D4O60343 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TBC1D4O60343 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TBC1D4O60343 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.79■■□□□ 1.72
TBC1D4O60343 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
TBC1D4O60343 AC019171.1-201ENST00000601251 1056 ntBASIC25.79■■□□□ 1.72
TBC1D4O60343 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.79■■□□□ 1.72
TBC1D4O60343 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.79■■□□□ 1.72
TBC1D4O60343 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.79■■□□□ 1.72
TBC1D4O60343 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TBC1D4O60343 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TBC1D4O60343 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TBC1D4O60343 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TBC1D4O60343 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TBC1D4O60343 AL035685.1-201ENST00000636663 812 ntBASIC25.78■■□□□ 1.72
TBC1D4O60343 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TBC1D4O60343 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TBC1D4O60343 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TBC1D4O60343 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
TBC1D4O60343 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
TBC1D4O60343 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TBC1D4O60343 RPS2P7-201ENST00000447334 885 ntBASIC25.77■■□□□ 1.72
TBC1D4O60343 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
TBC1D4O60343 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TBC1D4O60343 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TBC1D4O60343 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TBC1D4O60343 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.77■■□□□ 1.72
TBC1D4O60343 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.77■■□□□ 1.72
TBC1D4O60343 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.77■■□□□ 1.72
TBC1D4O60343 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D4O60343 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D4O60343 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D4O60343 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
TBC1D4O60343 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.76■■□□□ 1.71
TBC1D4O60343 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TBC1D4O60343 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TBC1D4O60343 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TBC1D4O60343 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
TBC1D4O60343 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TBC1D4O60343 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TBC1D4O60343 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TBC1D4O60343 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TBC1D4O60343 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TBC1D4O60343 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TBC1D4O60343 YBX1P4-201ENST00000392794 808 ntBASIC25.73■■□□□ 1.71
TBC1D4O60343 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TBC1D4O60343 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.73■■□□□ 1.71
TBC1D4O60343 LONRF2P2-201ENST00000439212 571 ntBASIC25.72■■□□□ 1.71
TBC1D4O60343 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TBC1D4O60343 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.72■■□□□ 1.71
TBC1D4O60343 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.72■■□□□ 1.71
TBC1D4O60343 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TBC1D4O60343 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
TBC1D4O60343 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TBC1D4O60343 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TBC1D4O60343 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.7■■□□□ 1.71
TBC1D4O60343 AP004609.3-201ENST00000610705 1884 ntBASIC25.7■■□□□ 1.71
TBC1D4O60343 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.7■■□□□ 1.71
TBC1D4O60343 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.71
TBC1D4O60343 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.69■■□□□ 1.7
TBC1D4O60343 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TBC1D4O60343 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TBC1D4O60343 AC103724.3-201ENST00000564481 992 ntBASIC25.68■■□□□ 1.7
TBC1D4O60343 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TBC1D4O60343 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TBC1D4O60343 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TBC1D4O60343 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TBC1D4O60343 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TBC1D4O60343 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TBC1D4O60343 AC009299.2-201ENST00000482477 511 ntBASIC25.67■■□□□ 1.7
TBC1D4O60343 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.67■■□□□ 1.7
TBC1D4O60343 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.67■■□□□ 1.7
TBC1D4O60343 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.67■■□□□ 1.7
TBC1D4O60343 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.66■■□□□ 1.7
TBC1D4O60343 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
TBC1D4O60343 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
TBC1D4O60343 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TBC1D4O60343 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.65■■□□□ 1.7
TBC1D4O60343 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.65■■□□□ 1.7
TBC1D4O60343 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TBC1D4O60343 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
TBC1D4O60343 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TBC1D4O60343 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TBC1D4O60343 KRT18P10-201ENST00000388836 1287 ntBASIC25.64■■□□□ 1.7
TBC1D4O60343 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TBC1D4O60343 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TBC1D4O60343 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TBC1D4O60343 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TBC1D4O60343 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
TBC1D4O60343 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
TBC1D4O60343 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TBC1D4O60343 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
TBC1D4O60343 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
TBC1D4O60343 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.63■■□□□ 1.69
TBC1D4O60343 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms