Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHL1O00533 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHL1O00533 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CHL1O00533 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.49■■■□□ 2.63
CHL1O00533 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.48■■■□□ 2.63
CHL1O00533 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CHL1O00533 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHL1O00533 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHL1O00533 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHL1O00533 MIR6765-201ENST00000614092 87 ntBASIC31.47■■■□□ 2.63
CHL1O00533 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
CHL1O00533 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHL1O00533 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.46■■■□□ 2.63
CHL1O00533 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CHL1O00533 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHL1O00533 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CHL1O00533 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHL1O00533 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHL1O00533 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHL1O00533 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CHL1O00533 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CHL1O00533 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.44■■■□□ 2.62
CHL1O00533 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.44■■■□□ 2.62
CHL1O00533 AC018755.3-202ENST00000596210 929 ntBASIC31.44■■■□□ 2.62
CHL1O00533 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.44■■■□□ 2.62
CHL1O00533 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHL1O00533 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.43■■■□□ 2.62
CHL1O00533 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.43■■■□□ 2.62
CHL1O00533 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHL1O00533 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHL1O00533 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.42■■■□□ 2.62
CHL1O00533 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHL1O00533 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.42■■■□□ 2.62
CHL1O00533 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHL1O00533 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHL1O00533 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.42■■■□□ 2.62
CHL1O00533 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHL1O00533 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
CHL1O00533 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CHL1O00533 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHL1O00533 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.41■■■□□ 2.62
CHL1O00533 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.41■■■□□ 2.62
CHL1O00533 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
CHL1O00533 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHL1O00533 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.41■■■□□ 2.62
CHL1O00533 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHL1O00533 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
CHL1O00533 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
CHL1O00533 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.4■■■□□ 2.62
CHL1O00533 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.4■■■□□ 2.62
CHL1O00533 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHL1O00533 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHL1O00533 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHL1O00533 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CHL1O00533 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.39■■■□□ 2.62
CHL1O00533 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.39■■■□□ 2.62
CHL1O00533 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.38■■■□□ 2.61
CHL1O00533 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
CHL1O00533 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHL1O00533 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.38■■■□□ 2.61
CHL1O00533 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.38■■■□□ 2.61
CHL1O00533 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.38■■■□□ 2.61
CHL1O00533 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
CHL1O00533 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHL1O00533 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHL1O00533 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.37■■■□□ 2.61
CHL1O00533 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHL1O00533 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CHL1O00533 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHL1O00533 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.36■■■□□ 2.61
CHL1O00533 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHL1O00533 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CHL1O00533 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHL1O00533 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.34■■■□□ 2.61
CHL1O00533 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHL1O00533 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHL1O00533 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHL1O00533 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.33■■■□□ 2.61
CHL1O00533 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.33■■■□□ 2.61
CHL1O00533 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHL1O00533 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CHL1O00533 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CHL1O00533 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHL1O00533 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.31■■■□□ 2.6
CHL1O00533 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
CHL1O00533 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CHL1O00533 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHL1O00533 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHL1O00533 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.3■■■□□ 2.6
CHL1O00533 AC087393.1-201ENST00000582896 145 ntBASIC31.3■■■□□ 2.6
CHL1O00533 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHL1O00533 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.28■■■□□ 2.6
CHL1O00533 RPS2P7-201ENST00000447334 885 ntBASIC31.28■■■□□ 2.6
CHL1O00533 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHL1O00533 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHL1O00533 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHL1O00533 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.27■■■□□ 2.6
CHL1O00533 PVT1_1.1-201ENST00000615125 194 ntBASIC31.27■■■□□ 2.6
CHL1O00533 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHL1O00533 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.26■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms