RNA–Protein interactions for RNA: ENST00000368984.7

HTRA1-201, Transcript of HtrA serine peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA1, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1-201ENST00000368984 NISCHQ9Y2I1 1504 aa53.9■■■■■ 6.22
HTRA1-201ENST00000368984 CCDC180Q9P1Z9 1646 aa46.48■■■■■ 5.03
HTRA1-201ENST00000368984 ZCCHC6Q5VYS8 1495 aaKnown RBP45.42■■■■■ 4.86
HTRA1-201ENST00000368984 SHROOM4Q9ULL8 1493 aa44.72■■■■■ 4.75
HTRA1-201ENST00000368984 DCAF1Q9Y4B6 1507 aa44.46■■■■■ 4.71
HTRA1-201ENST00000368984 DCAF8L2P0C7V8 631 aa44.46■■■■■ 4.71
HTRA1-201ENST00000368984 MYO15BQ96JP2 1530 aa43.61■■■■■ 4.57
HTRA1-201ENST00000368984 ABCC9O60706 1549 aa43.51■■■■■ 4.56
HTRA1-201ENST00000368984 SUPT5HO00267 1087 aaKnown RBP43.4■■■■■ 4.54
HTRA1-201ENST00000368984 NACADO15069 1562 aa43.17■■■■■ 4.5
HTRA1-201ENST00000368984 SCRIBQ14160 1630 aa43.04■■■■■ 4.48
HTRA1-201ENST00000368984 RB1CC1Q8TDY2 1594 aa42.62■■■■■ 4.41
HTRA1-201ENST00000368984 RSF1Q96T23 1441 aaPredicted RBP42.18■■■■■ 4.34
HTRA1-201ENST00000368984 CECR2Q9BXF3 1484 aa41.94■■■■■ 4.3
HTRA1-201ENST00000368984 CHIC1Q5VXU3 224 aa41.92■■■■■ 4.3
HTRA1-201ENST00000368984 UNC13AQ9UPW8 1703 aa41.88■■■■■ 4.29
HTRA1-201ENST00000368984 MROH2BQ7Z745 1585 aa41.74■■■■■ 4.27
HTRA1-201ENST00000368984 BAZ1AQ9NRL2 1556 aaPredicted RBP41.5■■■■■ 4.23
HTRA1-201ENST00000368984 WIZO95785 1651 aa41.44■■■■■ 4.22
HTRA1-201ENST00000368984 BICRAQ9NZM4 1560 aa41.44■■■■■ 4.22
HTRA1-201ENST00000368984 PABPN1Q86U42 306 aaKnown RBP eCLIP41.28■■■■■ 4.2
HTRA1-201ENST00000368984 SMARCA4P51532 1647 aa41.25■■■■■ 4.19
HTRA1-201ENST00000368984 TOP2AP11388 1531 aaKnown RBP40.92■■■■■ 4.14
HTRA1-201ENST00000368984 PEG3Q9GZU2 1588 aa40.67■■■■■ 4.1
HTRA1-201ENST00000368984 TRIM41Q8WV44 630 aa40.67■■■■■ 4.1
HTRA1-201ENST00000368984 SMARCA2P51531 1590 aa40.62■■■■■ 4.09
HTRA1-201ENST00000368984 CCDC88BA6NC98 1476 aa40.62■■■■■ 4.09
HTRA1-201ENST00000368984 EIF4G1Q04637 1599 aaKnown RBP40.6■■■■■ 4.09
HTRA1-201ENST00000368984 LOC105371045A0A1W2PR82 267 aa40.45■■■■■ 4.07
HTRA1-201ENST00000368984 ATAD2BQ9ULI0 1458 aa40.42■■■■■ 4.06
HTRA1-201ENST00000368984 BAZ1BQ9UIG0 1483 aaKnown RBP40.21■■■■■ 4.03
HTRA1-201ENST00000368984 ABCC8Q09428 1581 aa40.06■■■■■ 4
HTRA1-201ENST00000368984 FAM9AQ8IZU1 332 aaPredicted RBP40.06■■■■■ 4
HTRA1-201ENST00000368984 NCAPD3P42695 1498 aa39.9■■■■□ 3.98
HTRA1-201ENST00000368984 HMGXB3Q12766 1538 aa39.85■■■■□ 3.97
HTRA1-201ENST00000368984 WRNQ14191 1432 aaPredicted RBP eCLIP39.64■■■■□ 3.94
HTRA1-201ENST00000368984 EHMT2Q96KQ7 1210 aa39.55■■■■□ 3.92
HTRA1-201ENST00000368984 SOGA1O94964 1423 aa39.5■■■■□ 3.91
HTRA1-201ENST00000368984 SYNJ1O43426 1573 aa39.47■■■■□ 3.91
HTRA1-201ENST00000368984 EEA1Q15075 1411 aa39.38■■■■□ 3.89
HTRA1-201ENST00000368984 PCGF6Q9BYE7 350 aa39.37■■■■□ 3.89
HTRA1-201ENST00000368984 RUSC2Q8N2Y8 1516 aa39.33■■■■□ 3.89
HTRA1-201ENST00000368984 CC2D2AQ9P2K1 1620 aa39.32■■■■□ 3.89
HTRA1-201ENST00000368984 CFTRP13569 1480 aa39.26■■■■□ 3.87
HTRA1-201ENST00000368984 CSRNP3Q8WYN3 585 aa39.23■■■■□ 3.87
HTRA1-201ENST00000368984 TOP2BQ02880 1626 aa39.18■■■■□ 3.86
HTRA1-201ENST00000368984 BIVM-ERCC5R4GMW8 1640 aa39.1■■■■□ 3.85
HTRA1-201ENST00000368984 TRIM26Q12899 539 aaPredicted RBP39.07■■■■□ 3.85
HTRA1-201ENST00000368984 TNIKQ9UKE5 1360 aa38.99■■■■□ 3.83
HTRA1-201ENST00000368984 CADPSQ9ULU8 1353 aa38.97■■■■□ 3.83
HTRA1-201ENST00000368984 PRDM2Q13029 1718 aa38.97■■■■□ 3.83
HTRA1-201ENST00000368984 CUX1P39880 1505 aa38.95■■■■□ 3.83
HTRA1-201ENST00000368984 GOLGA3Q08378 1498 aa38.93■■■■□ 3.82
HTRA1-201ENST00000368984 CEP162Q5TB80 1403 aa38.87■■■■□ 3.81
HTRA1-201ENST00000368984 KIF21BO75037 1637 aa38.86■■■■□ 3.81
HTRA1-201ENST00000368984 CEP164Q9UPV0 1460 aa38.85■■■■□ 3.81
HTRA1-201ENST00000368984 UBTFP17480 764 aaKnown RBP38.83■■■■□ 3.81
HTRA1-201ENST00000368984 HRCP23327 699 aa38.81■■■■□ 3.8
HTRA1-201ENST00000368984 RAPGEF2Q9Y4G8 1499 aa38.62■■■■□ 3.77
HTRA1-201ENST00000368984 FANCD2Q9BXW9 1451 aa38.55■■■■□ 3.76
HTRA1-201ENST00000368984 KIF27Q86VH2 1401 aa38.53■■■■□ 3.76
HTRA1-201ENST00000368984 PPARGC1BQ86YN6 1023 aaKnown RBP38.51■■■■□ 3.76
HTRA1-201ENST00000368984 PRXQ9BXM0 1461 aa38.5■■■■□ 3.75
HTRA1-201ENST00000368984 NESP48681 1621 aa38.48■■■■□ 3.75
HTRA1-201ENST00000368984 ERICH3Q5RHP9 1530 aa38.45■■■■□ 3.75
HTRA1-201ENST00000368984 FGD5Q6ZNL6 1462 aa38.4■■■■□ 3.74
HTRA1-201ENST00000368984 CLIP1P30622 1438 aa38.38■■■■□ 3.73
HTRA1-201ENST00000368984 LAMC3Q9Y6N6 1575 aa38.36■■■■□ 3.73
HTRA1-201ENST00000368984 DNAJC5BQ9UF47 199 aa38.35■■■■□ 3.73
HTRA1-201ENST00000368984 CUX2O14529 1486 aa38.3■■■■□ 3.72
HTRA1-201ENST00000368984 DNMBPQ6XZF7 1577 aa38.28■■■■□ 3.72
HTRA1-201ENST00000368984 TOPBP1Q92547 1522 aa38.21■■■■□ 3.71
HTRA1-201ENST00000368984 IGF1RP08069 1367 aa38.19■■■■□ 3.7
HTRA1-201ENST00000368984 VPS8Q8N3P4 1428 aa38.14■■■■□ 3.7
HTRA1-201ENST00000368984 POLA1P09884 1462 aaPredicted RBP38.1■■■■□ 3.69
HTRA1-201ENST00000368984 RANGAP1P46060 587 aaPredicted RBP38.08■■■■□ 3.69
HTRA1-201ENST00000368984 PDS5BQ9NTI5 1447 aa38.08■■■■□ 3.69
HTRA1-201ENST00000368984 RAD54L2Q9Y4B4 1467 aa38.05■■■■□ 3.68
HTRA1-201ENST00000368984 URB2Q14146 1524 aaKnown RBP38.04■■■■□ 3.68
HTRA1-201ENST00000368984 ABCA10Q8WWZ4 1543 aa38.03■■■■□ 3.68
HTRA1-201ENST00000368984 TTBK1Q5TCY1 1321 aaPredicted RBP38.03■■■■□ 3.68
HTRA1-201ENST00000368984 CARMIL1Q5VZK9 1371 aa37.99■■■■□ 3.67
HTRA1-201ENST00000368984 ARAP1Q96P48 1450 aa37.93■■■■□ 3.66
HTRA1-201ENST00000368984 KIF21AQ7Z4S6 1674 aa37.91■■■■□ 3.66
HTRA1-201ENST00000368984 ZEB1P37275 1124 aaPredicted RBP37.81■■■■□ 3.64
HTRA1-201ENST00000368984 WDR97A6NE52 1622 aa37.8■■■■□ 3.64
HTRA1-201ENST00000368984 ARHGAP35Q9NRY4 1499 aa37.78■■■■□ 3.64
HTRA1-201ENST00000368984 APLP2Q06481 763 aa37.78■■■■□ 3.64
HTRA1-201ENST00000368984 CUL7Q14999 1698 aa37.68■■■■□ 3.62
HTRA1-201ENST00000368984 ABCA5Q8WWZ7 1642 aa37.65■■■■□ 3.62
HTRA1-201ENST00000368984 TDRD9Q8NDG6 1382 aaKnown RBP37.63■■■■□ 3.61
HTRA1-201ENST00000368984 GAPVD1Q14C86 1478 aa37.57■■■■□ 3.6
HTRA1-201ENST00000368984 TARBP1Q13395 1621 aaKnown RBP37.56■■■■□ 3.6
HTRA1-201ENST00000368984 MRC2Q9UBG0 1479 aa37.55■■■■□ 3.6
HTRA1-201ENST00000368984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.54■■■■□ 3.6
HTRA1-201ENST00000368984 KANK4Q5T7N3 995 aaPredicted RBP37.45■■■■□ 3.59
HTRA1-201ENST00000368984 CCER1Q8TC90 406 aaPredicted RBP37.42■■■■□ 3.58
HTRA1-201ENST00000368984 CTTNBP2Q8WZ74 1663 aa37.39■■■■□ 3.58
HTRA1-201ENST00000368984 WDR62O43379 1518 aa37.32■■■■□ 3.56
HTRA1-201ENST00000368984 EFCAB5A4FU69 1503 aa37.3■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms