Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MAP4K4-211ENST00000427603 526 ntTSL 411.27□□□□□ -0.615e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC9.76□□□□□ -0.855e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.045e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.45□□□□□ -1.065e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.115e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.13□□□□□ -1.115e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.62□□□□□ -1.195e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.82□□□□□ -1.325e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-207ENST00000417294 4251 ntTSL 56.01□□□□□ -1.455e-6■■□□□ 13.6
XRN2Q9H0D6 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.811e-9■■□□□ 13.6
XRN2Q9H0D6 ZEB2-242ENST00000637591 101 ntTSL 50.48□□□□□ -2.339e-9■■□□□ 13.6
XRN2Q9H0D6 RBM14-207ENST00000461478 693 ntTSL 225.12■■□□□ 1.613e-17■■□□□ 13.6
XRN2Q9H0D6 TFRC-204ENST00000421258 524 ntTSL 316.24■□□□□ 0.193e-17■■□□□ 13.6
XRN2Q9H0D6 TFRC-208ENST00000464011 546 ntTSL 413.66□□□□□ -0.223e-17■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.658e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-215ENST00000503418 662 ntTSL 423.35■■□□□ 1.338e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)22.14■■□□□ 1.138e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-213ENST00000502690 599 ntTSL 420.74■□□□□ 0.918e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.088e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.298e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-232ENST00000514755 593 ntTSL 412.92□□□□□ -0.348e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC12.63□□□□□ -0.398e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-227ENST00000508818 584 ntTSL 212.13□□□□□ -0.478e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.558e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.568e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-223ENST00000508249 604 ntTSL 411.52□□□□□ -0.578e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.828e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-222ENST00000508238 547 ntTSL 49.5□□□□□ -0.898e-9■■□□□ 13.6
XRN2Q9H0D6 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.26□□□□□ -1.258e-9■■□□□ 13.6
XRN2Q9H0D6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.822e-6■■□□□ 13.6
XRN2Q9H0D6 CSNK1G2-208ENST00000591002 617 ntTSL 323.39■■□□□ 1.331e-10■■□□□ 13.6
XRN2Q9H0D6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.77■■□□□ 1.082e-6■■□□□ 13.6
XRN2Q9H0D6 PHRF1-204ENST00000532550 748 ntTSL 320.48■□□□□ 0.872e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.74■□□□□ 0.752e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.24■□□□□ 0.672e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG17-205ENST00000424235 764 ntTSL 219.21■□□□□ 0.672e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.89■□□□□ 0.612e-6■■□□□ 13.6
XRN2Q9H0D6 CSNK1G2-203ENST00000585959 704 ntTSL 218.54■□□□□ 0.561e-10■■□□□ 13.6
XRN2Q9H0D6 PUF60-212ENST00000528320 922 ntTSL 218.15■□□□□ 0.52e-7■■□□□ 13.6
XRN2Q9H0D6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.442e-6■■□□□ 13.6
XRN2Q9H0D6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.432e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.58■□□□□ 0.42e-6■■□□□ 13.6
XRN2Q9H0D6 CSNK1G2-207ENST00000590106 1006 ntTSL 517.5■□□□□ 0.391e-10■■□□□ 13.6
XRN2Q9H0D6 PHRF1-206ENST00000534320 5178 ntTSL 517.46■□□□□ 0.382e-6■■□□□ 13.6
XRN2Q9H0D6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.312e-6■■□□□ 13.6
XRN2Q9H0D6 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.252e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.53■□□□□ 0.242e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.27■□□□□ 0.22e-6■■□□□ 13.6
XRN2Q9H0D6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.182e-6■■□□□ 13.6
XRN2Q9H0D6 PANK4-212ENST00000515423 430 ntTSL 315.44■□□□□ 0.062e-6■■□□□ 13.6
XRN2Q9H0D6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.36■□□□□ 0.052e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG15-204ENST00000579383 731 ntTSL 215.33■□□□□ 0.042e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.6□□□□□ -0.072e-6■■□□□ 13.6
XRN2Q9H0D6 RPS10-203ENST00000464218 615 ntTSL 514.48□□□□□ -0.092e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC14.35□□□□□ -0.112e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG17-202ENST00000414142 2102 ntTSL 214.3□□□□□ -0.122e-6■■□□□ 13.6
XRN2Q9H0D6 RPS10-206ENST00000494077 781 ntTSL 213.82□□□□□ -0.22e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG15-201ENST00000438705 509 ntTSL 3 BASIC13.59□□□□□ -0.232e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG15-209ENST00000584686 541 ntTSL 3 BASIC13.27□□□□□ -0.292e-6■■□□□ 13.6
XRN2Q9H0D6 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.312e-6■■□□□ 13.6
XRN2Q9H0D6 SNHG15-208ENST00000584327 505 ntTSL 3 BASIC12.75□□□□□ -0.372e-6■■□□□ 13.6
XRN2Q9H0D6 RPS10-204ENST00000467531 777 ntTSL 212.63□□□□□ -0.392e-6■■□□□ 13.6
XRN2Q9H0D6 RPS10-201ENST00000326199 644 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.432e-6■■□□□ 13.6
XRN2Q9H0D6 RPS10-202ENST00000344700 650 ntTSL 3 BASIC12.21□□□□□ -0.452e-6■■□□□ 13.6
XRN2Q9H0D6 AL117329.1-201ENST00000423737 1815 ntTSL 2 BASIC11.42□□□□□ -0.582e-6■■□□□ 13.6
XRN2Q9H0D6 PUF60-210ENST00000527584 547 ntTSL 211.16□□□□□ -0.622e-7■■□□□ 13.6
XRN2Q9H0D6 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC10.43□□□□□ -0.742e-6■■□□□ 13.6
XRN2Q9H0D6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.022e-6■■□□□ 13.6
XRN2Q9H0D6 TNFRSF19-205ENST00000464735 660 ntTSL 220.3■□□□□ 0.842e-6■■□□□ 13.6
XRN2Q9H0D6 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.862e-6■■□□□ 13.6
XRN2Q9H0D6 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.062e-6■■□□□ 13.6
XRN2Q9H0D6 LUC7L-219ENST00000494545 725 ntTSL 527.12■■□□□ 1.934e-24■■□□□ 13.6
XRN2Q9H0D6 LUC7L-218ENST00000494366 668 ntTSL 321.71■■□□□ 1.074e-24■■□□□ 13.6
XRN2Q9H0D6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.964e-24■■□□□ 13.6
XRN2Q9H0D6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20■□□□□ 0.794e-24■■□□□ 13.6
XRN2Q9H0D6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.05■□□□□ 0.644e-24■■□□□ 13.6
XRN2Q9H0D6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.73■□□□□ 0.594e-24■■□□□ 13.6
XRN2Q9H0D6 LUC7L-207ENST00000426094 2737 ntTSL 1 (best)18.62■□□□□ 0.574e-24■■□□□ 13.6
XRN2Q9H0D6 LUC7L-206ENST00000419516 1211 ntTSL 515.21■□□□□ 0.034e-24■■□□□ 13.6
XRN2Q9H0D6 LUC7L-205ENST00000418978 989 ntTSL 514.53□□□□□ -0.084e-24■■□□□ 13.6
XRN2Q9H0D6 LUC7L-217ENST00000490762 2643 ntTSL 1 (best)14.01□□□□□ -0.174e-24■■□□□ 13.6
XRN2Q9H0D6 LUC7L-210ENST00000430864 695 ntTSL 513.69□□□□□ -0.224e-24■■□□□ 13.6
XRN2Q9H0D6 HHEX-204ENST00000551454 1307 ntTSL 1 (best)24.94■■□□□ 1.588e-7■■□□□ 13.6
XRN2Q9H0D6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.538e-7■■□□□ 13.6
XRN2Q9H0D6 TRA2A-204ENST00000474586 868 ntTSL 325.55■■□□□ 1.683e-9■■□□□ 13.6
XRN2Q9H0D6 TRA2A-203ENST00000448549 582 ntTSL 418.97■□□□□ 0.633e-9■■□□□ 13.6
XRN2Q9H0D6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.583e-9■■□□□ 13.6
XRN2Q9H0D6 TRA2A-208ENST00000490942 862 ntTSL 1 (best)18.1■□□□□ 0.493e-9■■□□□ 13.6
XRN2Q9H0D6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.423e-9■■□□□ 13.6
XRN2Q9H0D6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.263e-9■■□□□ 13.6
XRN2Q9H0D6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.063e-9■■□□□ 13.6
XRN2Q9H0D6 TRA2A-209ENST00000494255 1653 ntTSL 1 (best)14.37□□□□□ -0.113e-9■■□□□ 13.6
XRN2Q9H0D6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.592e-6■■□□□ 13.6
XRN2Q9H0D6 SNTB1-203ENST00000519177 1962 ntTSL 1 (best)19.1■□□□□ 0.652e-6■■□□□ 13.6
XRN2Q9H0D6 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.411e-6■■□□□ 13.6
XRN2Q9H0D6 GLUL-208ENST00000475808 868 ntTSL 210.69□□□□□ -0.71e-6■■□□□ 13.6
XRN2Q9H0D6 GLUL-212ENST00000491322 6132 ntTSL 1 (best)10.12□□□□□ -0.791e-6■■□□□ 13.6
XRN2Q9H0D6 SIRT7-216ENST00000574915 315 ntTSL 228.26■■■□□ 2.118e-8■■□□□ 13.6
XRN2Q9H0D6 SIRT7-204ENST00000571213 683 ntTSL 228.21■■■□□ 2.118e-8■■□□□ 13.6
XRN2Q9H0D6 SIRT7-209ENST00000572671 656 ntTSL 226.26■■□□□ 1.798e-8■■□□□ 13.6
Retrieved 100 of 21,068 protein–RNA pairs in 110.1 ms