RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 NISCHQ9Y2I1 1504 aa33.72■■■□□ 2.99
SNHG17-208ENST00000456953 ABCC9O60706 1549 aa30.93■■■□□ 2.54
SNHG17-208ENST00000456953 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
SNHG17-208ENST00000456953 DNAJC5BQ9UF47 199 aa29.44■■■□□ 2.3
SNHG17-208ENST00000456953 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.28
SNHG17-208ENST00000456953 NACADO15069 1562 aa28.95■■■□□ 2.22
SNHG17-208ENST00000456953 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
SNHG17-208ENST00000456953 DCAF8L2P0C7V8 631 aa28.62■■■□□ 2.17
SNHG17-208ENST00000456953 UNC13AQ9UPW8 1703 aa28.55■■■□□ 2.16
SNHG17-208ENST00000456953 MYO15BQ96JP2 1530 aa28.41■■■□□ 2.14
SNHG17-208ENST00000456953 BICRAQ9NZM4 1560 aa28.41■■■□□ 2.14
SNHG17-208ENST00000456953 SHROOM4Q9ULL8 1493 aa28.04■■■□□ 2.08
SNHG17-208ENST00000456953 CECR2Q9BXF3 1484 aa27.94■■■□□ 2.06
SNHG17-208ENST00000456953 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
SNHG17-208ENST00000456953 DCAF1Q9Y4B6 1507 aa27.85■■■□□ 2.05
SNHG17-208ENST00000456953 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.05
SNHG17-208ENST00000456953 EIF4G1Q04637 1599 aaKnown RBP27.76■■■□□ 2.03
SNHG17-208ENST00000456953 SCRIBQ14160 1630 aa27.71■■■□□ 2.03
SNHG17-208ENST00000456953 DNAJC5Q9H3Z4 198 aa27.45■■□□□ 1.98
SNHG17-208ENST00000456953 CUX2O14529 1486 aa26.91■■□□□ 1.9
SNHG17-208ENST00000456953 ERCC6Q03468 1493 aa26.77■■□□□ 1.88
SNHG17-208ENST00000456953 NCAPD3P42695 1498 aa26.73■■□□□ 1.87
SNHG17-208ENST00000456953 ATAD2BQ9ULI0 1458 aa26.56■■□□□ 1.84
SNHG17-208ENST00000456953 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
SNHG17-208ENST00000456953 SMARCA2P51531 1590 aa26.48■■□□□ 1.83
SNHG17-208ENST00000456953 NESP48681 1621 aa26.42■■□□□ 1.82
SNHG17-208ENST00000456953 SMARCA4P51532 1647 aa26.4■■□□□ 1.82
SNHG17-208ENST00000456953 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
SNHG17-208ENST00000456953 THOC2Q8NI27 1593 aaKnown RBP26.28■■□□□ 1.8
SNHG17-208ENST00000456953 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
SNHG17-208ENST00000456953 LAMC3Q9Y6N6 1575 aa26.2■■□□□ 1.79
SNHG17-208ENST00000456953 PEG3Q9GZU2 1588 aa26.17■■□□□ 1.78
SNHG17-208ENST00000456953 PDS5BQ9NTI5 1447 aa26.07■■□□□ 1.76
SNHG17-208ENST00000456953 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
SNHG17-208ENST00000456953 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
SNHG17-208ENST00000456953 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.75
SNHG17-208ENST00000456953 CADPSQ9ULU8 1353 aa25.88■■□□□ 1.73
SNHG17-208ENST00000456953 MRC2Q9UBG0 1479 aa25.86■■□□□ 1.73
SNHG17-208ENST00000456953 WDR62O43379 1518 aa25.83■■□□□ 1.72
SNHG17-208ENST00000456953 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
SNHG17-208ENST00000456953 WIZO95785 1651 aa25.6■■□□□ 1.69
SNHG17-208ENST00000456953 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
SNHG17-208ENST00000456953 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
SNHG17-208ENST00000456953 CFTRP13569 1480 aa25.49■■□□□ 1.67
SNHG17-208ENST00000456953 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
SNHG17-208ENST00000456953 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
SNHG17-208ENST00000456953 RIMBP3CA6NJZ7 1639 aa25.28■■□□□ 1.64
SNHG17-208ENST00000456953 RIMBP3BA6NNM3 1639 aa25.28■■□□□ 1.64
SNHG17-208ENST00000456953 RIMBP3Q9UFD9 1639 aa25.28■■□□□ 1.64
SNHG17-208ENST00000456953 RSF1Q96T23 1441 aaPredicted RBP25.25■■□□□ 1.63
SNHG17-208ENST00000456953 IFT140Q96RY7 1462 aa25.18■■□□□ 1.62
SNHG17-208ENST00000456953 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
SNHG17-208ENST00000456953 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
SNHG17-208ENST00000456953 ZNF608Q9ULD9 1512 aaPredicted RBP25.16■■□□□ 1.62
SNHG17-208ENST00000456953 TOPBP1Q92547 1522 aa25.04■■□□□ 1.6
SNHG17-208ENST00000456953 CYB5RLQ6IPT4 315 aa25■■□□□ 1.59
SNHG17-208ENST00000456953 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
SNHG17-208ENST00000456953 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
SNHG17-208ENST00000456953 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
SNHG17-208ENST00000456953 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
SNHG17-208ENST00000456953 CHD1O14646 1710 aa24.89■■□□□ 1.58
SNHG17-208ENST00000456953 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
SNHG17-208ENST00000456953 TRHP20396 242 aaPredicted RBP24.87■■□□□ 1.57
SNHG17-208ENST00000456953 AQRO60306 1485 aaKnown RBP eCLIP24.86■■□□□ 1.578e-7■■■■□ 19.7
SNHG17-208ENST00000456953 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
SNHG17-208ENST00000456953 FBLN2P98095 1184 aa24.79■■□□□ 1.56
SNHG17-208ENST00000456953 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
SNHG17-208ENST00000456953 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.54
SNHG17-208ENST00000456953 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
SNHG17-208ENST00000456953 SOGA1O94964 1423 aa24.63■■□□□ 1.53
SNHG17-208ENST00000456953 CLASP1Q7Z460 1538 aa24.62■■□□□ 1.53
SNHG17-208ENST00000456953 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
SNHG17-208ENST00000456953 SNAPC4Q5SXM2 1469 aa24.6■■□□□ 1.53
SNHG17-208ENST00000456953 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
SNHG17-208ENST00000456953 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
SNHG17-208ENST00000456953 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
SNHG17-208ENST00000456953 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
SNHG17-208ENST00000456953 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
SNHG17-208ENST00000456953 GRIN2BQ13224 1484 aa24.49■■□□□ 1.51
SNHG17-208ENST00000456953 SYNJ2O15056 1496 aa24.47■■□□□ 1.51
SNHG17-208ENST00000456953 CUX1P39880 1505 aa24.42■■□□□ 1.5
SNHG17-208ENST00000456953 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.5
SNHG17-208ENST00000456953 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
SNHG17-208ENST00000456953 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
SNHG17-208ENST00000456953 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
SNHG17-208ENST00000456953 ERCC6L2Q5T890 1561 aa24.17■■□□□ 1.46
SNHG17-208ENST00000456953 GRIN2AQ12879 1464 aa24.17■■□□□ 1.46
SNHG17-208ENST00000456953 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
SNHG17-208ENST00000456953 NUP160Q12769 1436 aa24.11■■□□□ 1.45
SNHG17-208ENST00000456953 ADAMTS12P58397 1594 aa24.09■■□□□ 1.45
SNHG17-208ENST00000456953 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
SNHG17-208ENST00000456953 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
SNHG17-208ENST00000456953 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
SNHG17-208ENST00000456953 KIF13AQ9H1H9 1805 aa23.98■■□□□ 1.43
SNHG17-208ENST00000456953 ERICH3Q5RHP9 1530 aa23.93■■□□□ 1.42
SNHG17-208ENST00000456953 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
SNHG17-208ENST00000456953 TOP2BQ02880 1626 aa23.91■■□□□ 1.42
SNHG17-208ENST00000456953 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
SNHG17-208ENST00000456953 JPH4Q96JJ6 628 aa23.85■■□□□ 1.41
SNHG17-208ENST00000456953 ABCC10Q5T3U5 1492 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms