RNA–Protein interactions for RNA: ENST00000413755.5

SNHG17-201, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-201ENST00000413755 NISCHQ9Y2I1 1504 aa36.13■■■■□ 3.37
SNHG17-201ENST00000413755 ABCC9O60706 1549 aa32.56■■■□□ 2.8
SNHG17-201ENST00000413755 CCDC180Q9P1Z9 1646 aa32.34■■■□□ 2.77
SNHG17-201ENST00000413755 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
SNHG17-201ENST00000413755 DNAJC5BQ9UF47 199 aa30.74■■■□□ 2.51
SNHG17-201ENST00000413755 NACADO15069 1562 aa30.66■■■□□ 2.5
SNHG17-201ENST00000413755 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
SNHG17-201ENST00000413755 PABPN1Q86U42 306 aaKnown RBP eCLIP30.36■■■□□ 2.45
SNHG17-201ENST00000413755 MYO15BQ96JP2 1530 aa30.25■■■□□ 2.43
SNHG17-201ENST00000413755 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
SNHG17-201ENST00000413755 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
SNHG17-201ENST00000413755 ZCCHC6Q5VYS8 1495 aaKnown RBP29.92■■■□□ 2.38
SNHG17-201ENST00000413755 DCAF1Q9Y4B6 1507 aa29.82■■■□□ 2.36
SNHG17-201ENST00000413755 SHROOM4Q9ULL8 1493 aa29.58■■■□□ 2.33
SNHG17-201ENST00000413755 SCRIBQ14160 1630 aa29.52■■■□□ 2.32
SNHG17-201ENST00000413755 CC2D2AQ9P2K1 1620 aa29.36■■■□□ 2.29
SNHG17-201ENST00000413755 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
SNHG17-201ENST00000413755 EIF4G1Q04637 1599 aaKnown RBP29.29■■■□□ 2.28
SNHG17-201ENST00000413755 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
SNHG17-201ENST00000413755 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
SNHG17-201ENST00000413755 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
SNHG17-201ENST00000413755 SMARCA4P51532 1647 aa28.15■■■□□ 2.1
SNHG17-201ENST00000413755 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
SNHG17-201ENST00000413755 HMGXB3Q12766 1538 aa28.09■■■□□ 2.09
SNHG17-201ENST00000413755 CUX2O14529 1486 aa28.08■■■□□ 2.09
SNHG17-201ENST00000413755 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
SNHG17-201ENST00000413755 BAZ1AQ9NRL2 1556 aaPredicted RBP28.01■■■□□ 2.07
SNHG17-201ENST00000413755 NESP48681 1621 aa27.96■■■□□ 2.07
SNHG17-201ENST00000413755 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.06
SNHG17-201ENST00000413755 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
SNHG17-201ENST00000413755 MROH2BQ7Z745 1585 aa27.85■■■□□ 2.05
SNHG17-201ENST00000413755 LAMC3Q9Y6N6 1575 aa27.68■■■□□ 2.02
SNHG17-201ENST00000413755 THOC2Q8NI27 1593 aaKnown RBP27.63■■■□□ 2.01
SNHG17-201ENST00000413755 PDS5BQ9NTI5 1447 aa27.57■■■□□ 2
SNHG17-201ENST00000413755 CADPSQ9ULU8 1353 aa27.52■■■□□ 2
SNHG17-201ENST00000413755 KIF21AQ7Z4S6 1674 aa27.48■■□□□ 1.99
SNHG17-201ENST00000413755 WIZO95785 1651 aa27.46■■□□□ 1.99
SNHG17-201ENST00000413755 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
SNHG17-201ENST00000413755 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.95
SNHG17-201ENST00000413755 WDR62O43379 1518 aa27.26■■□□□ 1.95
SNHG17-201ENST00000413755 CFTRP13569 1480 aa27.18■■□□□ 1.94
SNHG17-201ENST00000413755 CEP164Q9UPV0 1460 aa27.18■■□□□ 1.94
SNHG17-201ENST00000413755 FANCD2Q9BXW9 1451 aa27.17■■□□□ 1.94
SNHG17-201ENST00000413755 TOP2AP11388 1531 aaKnown RBP27.11■■□□□ 1.93
SNHG17-201ENST00000413755 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
SNHG17-201ENST00000413755 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
SNHG17-201ENST00000413755 CCDC88BA6NC98 1476 aa26.86■■□□□ 1.89
SNHG17-201ENST00000413755 OSCARQ8IYS5 282 aa26.83■■□□□ 1.89
SNHG17-201ENST00000413755 PRDM2Q13029 1718 aa26.69■■□□□ 1.86
SNHG17-201ENST00000413755 IFT140Q96RY7 1462 aa26.67■■□□□ 1.86
SNHG17-201ENST00000413755 ZNF608Q9ULD9 1512 aaPredicted RBP26.66■■□□□ 1.86
SNHG17-201ENST00000413755 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
SNHG17-201ENST00000413755 ABCC8Q09428 1581 aa26.55■■□□□ 1.84
SNHG17-201ENST00000413755 DNMBPQ6XZF7 1577 aa26.5■■□□□ 1.83
SNHG17-201ENST00000413755 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
SNHG17-201ENST00000413755 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.826e-7■■■■□ 26.7
SNHG17-201ENST00000413755 RIMBP3CA6NJZ7 1639 aa26.41■■□□□ 1.82
SNHG17-201ENST00000413755 RIMBP3BA6NNM3 1639 aa26.41■■□□□ 1.82
SNHG17-201ENST00000413755 RIMBP3Q9UFD9 1639 aa26.41■■□□□ 1.82
SNHG17-201ENST00000413755 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.81
SNHG17-201ENST00000413755 POLA1P09884 1462 aaPredicted RBP26.37■■□□□ 1.81
SNHG17-201ENST00000413755 ARHGEF11O15085 1522 aa26.35■■□□□ 1.81
SNHG17-201ENST00000413755 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
SNHG17-201ENST00000413755 SOGA1O94964 1423 aa26.27■■□□□ 1.8
SNHG17-201ENST00000413755 TDRD9Q8NDG6 1382 aaKnown RBP26.25■■□□□ 1.79
SNHG17-201ENST00000413755 FBLN2P98095 1184 aa26.25■■□□□ 1.79
SNHG17-201ENST00000413755 CYB5RLQ6IPT4 315 aa26.22■■□□□ 1.79
SNHG17-201ENST00000413755 CHD1O14646 1710 aa26.19■■□□□ 1.78
SNHG17-201ENST00000413755 FGD5Q6ZNL6 1462 aa26.19■■□□□ 1.78
SNHG17-201ENST00000413755 CUX1P39880 1505 aa26.15■■□□□ 1.78
SNHG17-201ENST00000413755 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
SNHG17-201ENST00000413755 SNAPC4Q5SXM2 1469 aa26.11■■□□□ 1.77
SNHG17-201ENST00000413755 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
SNHG17-201ENST00000413755 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
SNHG17-201ENST00000413755 GRIN2BQ13224 1484 aa26.03■■□□□ 1.76
SNHG17-201ENST00000413755 MAGI1Q96QZ7 1491 aaPredicted RBP26.02■■□□□ 1.76
SNHG17-201ENST00000413755 CLASP1Q7Z460 1538 aa25.99■■□□□ 1.75
SNHG17-201ENST00000413755 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
SNHG17-201ENST00000413755 SYNJ2O15056 1496 aa25.95■■□□□ 1.74
SNHG17-201ENST00000413755 GAPVD1Q14C86 1478 aa25.92■■□□□ 1.74
SNHG17-201ENST00000413755 SYNJ1O43426 1573 aa25.92■■□□□ 1.74
SNHG17-201ENST00000413755 TRHP20396 242 aaPredicted RBP25.92■■□□□ 1.74
SNHG17-201ENST00000413755 ABCA10Q8WWZ4 1543 aa25.89■■□□□ 1.74
SNHG17-201ENST00000413755 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
SNHG17-201ENST00000413755 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
SNHG17-201ENST00000413755 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
SNHG17-201ENST00000413755 GRIN2AQ12879 1464 aa25.69■■□□□ 1.7
SNHG17-201ENST00000413755 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
SNHG17-201ENST00000413755 BIVM-ERCC5R4GMW8 1640 aa25.64■■□□□ 1.7
SNHG17-201ENST00000413755 NUP160Q12769 1436 aa25.63■■□□□ 1.69
SNHG17-201ENST00000413755 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
SNHG17-201ENST00000413755 ERCC6L2Q5T890 1561 aa25.61■■□□□ 1.69
SNHG17-201ENST00000413755 FHAD1B1AJZ9 1412 aa25.6■■□□□ 1.69
SNHG17-201ENST00000413755 CEP170Q5SW79 1584 aa25.59■■□□□ 1.69
SNHG17-201ENST00000413755 ERICH3Q5RHP9 1530 aa25.53■■□□□ 1.68
SNHG17-201ENST00000413755 SHROOM2Q13796 1616 aa25.47■■□□□ 1.67
SNHG17-201ENST00000413755 JPH4Q96JJ6 628 aa25.41■■□□□ 1.66
SNHG17-201ENST00000413755 PRG4Q92954 1404 aaPredicted RBP25.39■■□□□ 1.66
SNHG17-201ENST00000413755 IGF1RP08069 1367 aa25.28■■□□□ 1.64
SNHG17-201ENST00000413755 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms