RNA–Protein interactions for RNA: ENST00000423536.5

SNHG17-204, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2 BASIC

Gene SNHG17, Length 517 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-204ENST00000423536 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
SNHG17-204ENST00000423536 ABCC9O60706 1549 aa19.35■□□□□ 0.69
SNHG17-204ENST00000423536 CCDC180Q9P1Z9 1646 aa18.68■□□□□ 0.58
SNHG17-204ENST00000423536 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
SNHG17-204ENST00000423536 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
SNHG17-204ENST00000423536 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
SNHG17-204ENST00000423536 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
SNHG17-204ENST00000423536 NACADO15069 1562 aa17.88■□□□□ 0.45
SNHG17-204ENST00000423536 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
SNHG17-204ENST00000423536 DNAJC5Q9H3Z4 198 aa17.52■□□□□ 0.4
SNHG17-204ENST00000423536 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
SNHG17-204ENST00000423536 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
SNHG17-204ENST00000423536 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
SNHG17-204ENST00000423536 CC2D2AQ9P2K1 1620 aa17.37■□□□□ 0.37
SNHG17-204ENST00000423536 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
SNHG17-204ENST00000423536 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
SNHG17-204ENST00000423536 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
SNHG17-204ENST00000423536 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
SNHG17-204ENST00000423536 ZCCHC6Q5VYS8 1495 aaKnown RBP16.97■□□□□ 0.31
SNHG17-204ENST00000423536 CUX2O14529 1486 aa16.82■□□□□ 0.28
SNHG17-204ENST00000423536 ERCC6Q03468 1493 aa16.81■□□□□ 0.28
SNHG17-204ENST00000423536 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
SNHG17-204ENST00000423536 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
SNHG17-204ENST00000423536 NESP48681 1621 aa16.44■□□□□ 0.22
SNHG17-204ENST00000423536 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
SNHG17-204ENST00000423536 SMARCA2P51531 1590 aa16.34■□□□□ 0.21
SNHG17-204ENST00000423536 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
SNHG17-204ENST00000423536 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
SNHG17-204ENST00000423536 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
SNHG17-204ENST00000423536 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
SNHG17-204ENST00000423536 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
SNHG17-204ENST00000423536 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.19
SNHG17-204ENST00000423536 SMARCA4P51532 1647 aa16.21■□□□□ 0.19
SNHG17-204ENST00000423536 BAZ1AQ9NRL2 1556 aaPredicted RBP16.12■□□□□ 0.17
SNHG17-204ENST00000423536 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
SNHG17-204ENST00000423536 CADPSQ9ULU8 1353 aa16.09■□□□□ 0.17
SNHG17-204ENST00000423536 MRC2Q9UBG0 1479 aa16.06■□□□□ 0.16
SNHG17-204ENST00000423536 PEG3Q9GZU2 1588 aa15.99■□□□□ 0.15
SNHG17-204ENST00000423536 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
SNHG17-204ENST00000423536 WDR62O43379 1518 aa15.94■□□□□ 0.14
SNHG17-204ENST00000423536 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
SNHG17-204ENST00000423536 CEP164Q9UPV0 1460 aa15.92■□□□□ 0.14
SNHG17-204ENST00000423536 AEBP2Q6ZN18 517 aaPredicted RBP15.9■□□□□ 0.14
SNHG17-204ENST00000423536 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
SNHG17-204ENST00000423536 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
SNHG17-204ENST00000423536 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
SNHG17-204ENST00000423536 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
SNHG17-204ENST00000423536 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
SNHG17-204ENST00000423536 WIZO95785 1651 aa15.73■□□□□ 0.11
SNHG17-204ENST00000423536 FBLN2P98095 1184 aa15.72■□□□□ 0.11
SNHG17-204ENST00000423536 CFTRP13569 1480 aa15.71■□□□□ 0.11
SNHG17-204ENST00000423536 ARHGEF11O15085 1522 aa15.7■□□□□ 0.1
SNHG17-204ENST00000423536 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
SNHG17-204ENST00000423536 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
SNHG17-204ENST00000423536 ZNF608Q9ULD9 1512 aaPredicted RBP15.61■□□□□ 0.09
SNHG17-204ENST00000423536 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.071e-11■■■■■ 32.6
SNHG17-204ENST00000423536 ARAP1Q96P48 1450 aa15.5■□□□□ 0.07
SNHG17-204ENST00000423536 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
SNHG17-204ENST00000423536 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
SNHG17-204ENST00000423536 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
SNHG17-204ENST00000423536 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
SNHG17-204ENST00000423536 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
SNHG17-204ENST00000423536 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
SNHG17-204ENST00000423536 CHD1O14646 1710 aa15.41■□□□□ 0.06
SNHG17-204ENST00000423536 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
SNHG17-204ENST00000423536 PRDM2Q13029 1718 aa15.38■□□□□ 0.05
SNHG17-204ENST00000423536 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
SNHG17-204ENST00000423536 DNMBPQ6XZF7 1577 aa15.34■□□□□ 0.05
SNHG17-204ENST00000423536 SOGA1O94964 1423 aa15.34■□□□□ 0.05
SNHG17-204ENST00000423536 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
SNHG17-204ENST00000423536 RAD54L2Q9Y4B4 1467 aa15.28■□□□□ 0.04
SNHG17-204ENST00000423536 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.03
SNHG17-204ENST00000423536 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
SNHG17-204ENST00000423536 SNAPC4Q5SXM2 1469 aa15.26■□□□□ 0.03
SNHG17-204ENST00000423536 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
SNHG17-204ENST00000423536 CLASP1Q7Z460 1538 aa15.2■□□□□ 0.02
SNHG17-204ENST00000423536 GRIN2BQ13224 1484 aa15.19■□□□□ 0.02
SNHG17-204ENST00000423536 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
SNHG17-204ENST00000423536 SYNJ2O15056 1496 aa15.16■□□□□ 0.02
SNHG17-204ENST00000423536 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
SNHG17-204ENST00000423536 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
SNHG17-204ENST00000423536 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
SNHG17-204ENST00000423536 ILDR1Q86SU0 546 aaPredicted RBP15.09■□□□□ 0.01
SNHG17-204ENST00000423536 FAM69CQ0P6D2 419 aa15.07■□□□□ 0
SNHG17-204ENST00000423536 CUX1P39880 1505 aa14.99□□□□□ -0.01
SNHG17-204ENST00000423536 KDM4FA0A1W2PPD8 638 aa14.97□□□□□ -0.01
SNHG17-204ENST00000423536 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
SNHG17-204ENST00000423536 ERCC6L2Q5T890 1561 aa14.96□□□□□ -0.01
SNHG17-204ENST00000423536 JPH4Q96JJ6 628 aa14.96□□□□□ -0.01
SNHG17-204ENST00000423536 GRIN2AQ12879 1464 aa14.94□□□□□ -0.02
SNHG17-204ENST00000423536 CEP170Q5SW79 1584 aa14.93□□□□□ -0.02
SNHG17-204ENST00000423536 PRG4Q92954 1404 aaPredicted RBP14.91□□□□□ -0.02
SNHG17-204ENST00000423536 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
SNHG17-204ENST00000423536 KIF13AQ9H1H9 1805 aa14.87□□□□□ -0.03
SNHG17-204ENST00000423536 NUP160Q12769 1436 aa14.87□□□□□ -0.03
SNHG17-204ENST00000423536 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
SNHG17-204ENST00000423536 FHAD1B1AJZ9 1412 aa14.86□□□□□ -0.03
SNHG17-204ENST00000423536 ABCC10Q5T3U5 1492 aa14.86□□□□□ -0.03
SNHG17-204ENST00000423536 ABCA5Q8WWZ7 1642 aa14.83□□□□□ -0.04
SNHG17-204ENST00000423536 TTBK1Q5TCY1 1321 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms