RNA–Protein interactions for RNA: ENST00000527584.5

PUF60-210, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-210ENST00000527584 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
PUF60-210ENST00000527584 ABCC9O60706 1549 aa21.7■■□□□ 1.06
PUF60-210ENST00000527584 DNAJC5BQ9UF47 199 aa21.5■■□□□ 1.03
PUF60-210ENST00000527584 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
PUF60-210ENST00000527584 DNAJC5Q9H3Z4 198 aa20.56■□□□□ 0.88
PUF60-210ENST00000527584 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
PUF60-210ENST00000527584 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
PUF60-210ENST00000527584 NACADO15069 1562 aa19.8■□□□□ 0.76
PUF60-210ENST00000527584 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
PUF60-210ENST00000527584 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
PUF60-210ENST00000527584 CECR2Q9BXF3 1484 aa19.7■□□□□ 0.74
PUF60-210ENST00000527584 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.73
PUF60-210ENST00000527584 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
PUF60-210ENST00000527584 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
PUF60-210ENST00000527584 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.67
PUF60-210ENST00000527584 CUX2O14529 1486 aa19.22■□□□□ 0.67
PUF60-210ENST00000527584 MYO15BQ96JP2 1530 aa19.22■□□□□ 0.67
PUF60-210ENST00000527584 TRIM41Q8WV44 630 aa19.03■□□□□ 0.64
PUF60-210ENST00000527584 ERCC6Q03468 1493 aa18.77■□□□□ 0.59
PUF60-210ENST00000527584 SCRIBQ14160 1630 aa18.68■□□□□ 0.58
PUF60-210ENST00000527584 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
PUF60-210ENST00000527584 THOC2Q8NI27 1593 aaKnown RBP18.41■□□□□ 0.54
PUF60-210ENST00000527584 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
PUF60-210ENST00000527584 NESP48681 1621 aa18.34■□□□□ 0.53
PUF60-210ENST00000527584 NCAPD3P42695 1498 aa18.33■□□□□ 0.53
PUF60-210ENST00000527584 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
PUF60-210ENST00000527584 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
PUF60-210ENST00000527584 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
PUF60-210ENST00000527584 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
PUF60-210ENST00000527584 ATAD2BQ9ULI0 1458 aa18.08■□□□□ 0.49
PUF60-210ENST00000527584 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
PUF60-210ENST00000527584 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
PUF60-210ENST00000527584 HMGXB3Q12766 1538 aa18.04■□□□□ 0.48
PUF60-210ENST00000527584 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.48
PUF60-210ENST00000527584 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.48
PUF60-210ENST00000527584 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.48
PUF60-210ENST00000527584 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
PUF60-210ENST00000527584 WDR62O43379 1518 aa17.91■□□□□ 0.46
PUF60-210ENST00000527584 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
PUF60-210ENST00000527584 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
PUF60-210ENST00000527584 ARHGEF11O15085 1522 aa17.86■□□□□ 0.45
PUF60-210ENST00000527584 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
PUF60-210ENST00000527584 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.44
PUF60-210ENST00000527584 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
PUF60-210ENST00000527584 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
PUF60-210ENST00000527584 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
PUF60-210ENST00000527584 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
PUF60-210ENST00000527584 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
PUF60-210ENST00000527584 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
PUF60-210ENST00000527584 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
PUF60-210ENST00000527584 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
PUF60-210ENST00000527584 RSF1Q96T23 1441 aaPredicted RBP17.4■□□□□ 0.38
PUF60-210ENST00000527584 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
PUF60-210ENST00000527584 MROH2BQ7Z745 1585 aa17.28■□□□□ 0.36
PUF60-210ENST00000527584 IFT140Q96RY7 1462 aa17.27■□□□□ 0.36
PUF60-210ENST00000527584 CHD1O14646 1710 aa17.27■□□□□ 0.35
PUF60-210ENST00000527584 CFTRP13569 1480 aa17.26■□□□□ 0.35
PUF60-210ENST00000527584 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
PUF60-210ENST00000527584 KDM4FA0A1W2PPD8 638 aa17.12■□□□□ 0.33
PUF60-210ENST00000527584 CLASP1Q7Z460 1538 aa17.1■□□□□ 0.33
PUF60-210ENST00000527584 FBLN2P98095 1184 aa17.07■□□□□ 0.32
PUF60-210ENST00000527584 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.321e-12■■■■■ 58
PUF60-210ENST00000527584 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
PUF60-210ENST00000527584 WIZO95785 1651 aa17.01■□□□□ 0.31
PUF60-210ENST00000527584 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
PUF60-210ENST00000527584 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
PUF60-210ENST00000527584 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
PUF60-210ENST00000527584 KIF13AQ9H1H9 1805 aa16.93■□□□□ 0.3
PUF60-210ENST00000527584 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
PUF60-210ENST00000527584 ABCC8Q09428 1581 aa16.89■□□□□ 0.3
PUF60-210ENST00000527584 ERCC6L2Q5T890 1561 aa16.87■□□□□ 0.29
PUF60-210ENST00000527584 FBXO41Q8TF61 875 aa16.86■□□□□ 0.29
PUF60-210ENST00000527584 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
PUF60-210ENST00000527584 SNAPC4Q5SXM2 1469 aa16.82■□□□□ 0.28
PUF60-210ENST00000527584 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
PUF60-210ENST00000527584 HECW2Q9P2P5 1572 aa16.78■□□□□ 0.28
PUF60-210ENST00000527584 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.27
PUF60-210ENST00000527584 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
PUF60-210ENST00000527584 MAGI1Q96QZ7 1491 aaPredicted RBP16.75■□□□□ 0.27
PUF60-210ENST00000527584 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
PUF60-210ENST00000527584 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
PUF60-210ENST00000527584 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
PUF60-210ENST00000527584 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
PUF60-210ENST00000527584 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
PUF60-210ENST00000527584 KDM6BO15054 1643 aa16.69■□□□□ 0.26
PUF60-210ENST00000527584 ABCC10Q5T3U5 1492 aa16.68■□□□□ 0.26
PUF60-210ENST00000527584 SOCS7O14512 581 aa16.67■□□□□ 0.26
PUF60-210ENST00000527584 FAM69CQ0P6D2 419 aa16.66■□□□□ 0.26
PUF60-210ENST00000527584 SOGA1O94964 1423 aa16.65■□□□□ 0.26
PUF60-210ENST00000527584 ADGRL1O94910 1474 aa16.63■□□□□ 0.25
PUF60-210ENST00000527584 GRIN2BQ13224 1484 aa16.63■□□□□ 0.25
PUF60-210ENST00000527584 ILDR2Q71H61 639 aa16.59■□□□□ 0.25
PUF60-210ENST00000527584 DIP2BQ9P265 1576 aa16.58■□□□□ 0.24
PUF60-210ENST00000527584 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
PUF60-210ENST00000527584 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
PUF60-210ENST00000527584 MAPKBP1O60336 1514 aa16.54■□□□□ 0.24
PUF60-210ENST00000527584 SHROOM2Q13796 1616 aa16.52■□□□□ 0.23
PUF60-210ENST00000527584 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
PUF60-210ENST00000527584 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
PUF60-210ENST00000527584 TSPOAP1O95153 1857 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms