RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 NISCHQ9Y2I1 1504 aa30.31■■■□□ 2.44
SNHG17-202ENST00000414142 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.79
SNHG17-202ENST00000414142 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
SNHG17-202ENST00000414142 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
SNHG17-202ENST00000414142 SHROOM4Q9ULL8 1493 aa25.07■■□□□ 1.6
SNHG17-202ENST00000414142 DCAF1Q9Y4B6 1507 aa24.99■■□□□ 1.59
SNHG17-202ENST00000414142 ABCC9O60706 1549 aa24.74■■□□□ 1.55
SNHG17-202ENST00000414142 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.52
SNHG17-202ENST00000414142 NACADO15069 1562 aa24.42■■□□□ 1.5
SNHG17-202ENST00000414142 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
SNHG17-202ENST00000414142 SUPT5HO00267 1087 aaKnown RBP24.27■■□□□ 1.48
SNHG17-202ENST00000414142 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
SNHG17-202ENST00000414142 UNC13AQ9UPW8 1703 aa23.73■■□□□ 1.39
SNHG17-202ENST00000414142 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
SNHG17-202ENST00000414142 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
SNHG17-202ENST00000414142 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
SNHG17-202ENST00000414142 PABPN1Q86U42 306 aaKnown RBP eCLIP23.44■■□□□ 1.34
SNHG17-202ENST00000414142 BICRAQ9NZM4 1560 aa23.44■■□□□ 1.34
SNHG17-202ENST00000414142 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
SNHG17-202ENST00000414142 WIZO95785 1651 aa23.3■■□□□ 1.32
SNHG17-202ENST00000414142 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
SNHG17-202ENST00000414142 SMARCA4P51532 1647 aa23.25■■□□□ 1.31
SNHG17-202ENST00000414142 TOP2AP11388 1531 aaKnown RBP23.01■■□□□ 1.27
SNHG17-202ENST00000414142 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.26
SNHG17-202ENST00000414142 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.24
SNHG17-202ENST00000414142 SMARCA2P51531 1590 aa22.82■■□□□ 1.24
SNHG17-202ENST00000414142 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
SNHG17-202ENST00000414142 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
SNHG17-202ENST00000414142 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
SNHG17-202ENST00000414142 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
SNHG17-202ENST00000414142 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
SNHG17-202ENST00000414142 HMGXB3Q12766 1538 aa22.51■■□□□ 1.19
SNHG17-202ENST00000414142 LOC105371045A0A1W2PR82 267 aa22.48■■□□□ 1.19
SNHG17-202ENST00000414142 ABCC8Q09428 1581 aa22.45■■□□□ 1.19
SNHG17-202ENST00000414142 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
SNHG17-202ENST00000414142 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
SNHG17-202ENST00000414142 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
SNHG17-202ENST00000414142 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
SNHG17-202ENST00000414142 SYNJ1O43426 1573 aa22.14■■□□□ 1.13
SNHG17-202ENST00000414142 CFTRP13569 1480 aa22.13■■□□□ 1.13
SNHG17-202ENST00000414142 SOGA1O94964 1423 aa22.09■■□□□ 1.13
SNHG17-202ENST00000414142 EEA1Q15075 1411 aa22.03■■□□□ 1.12
SNHG17-202ENST00000414142 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
SNHG17-202ENST00000414142 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
SNHG17-202ENST00000414142 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
SNHG17-202ENST00000414142 RUSC2Q8N2Y8 1516 aa22■■□□□ 1.11
SNHG17-202ENST00000414142 CSRNP3Q8WYN3 585 aa21.97■■□□□ 1.11
SNHG17-202ENST00000414142 BIVM-ERCC5R4GMW8 1640 aa21.97■■□□□ 1.11
SNHG17-202ENST00000414142 CUX1P39880 1505 aa21.91■■□□□ 1.1
SNHG17-202ENST00000414142 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
SNHG17-202ENST00000414142 NESP48681 1621 aa21.79■■□□□ 1.08
SNHG17-202ENST00000414142 UBTFP17480 764 aaKnown RBP21.78■■□□□ 1.08
SNHG17-202ENST00000414142 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
SNHG17-202ENST00000414142 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
SNHG17-202ENST00000414142 TNIKQ9UKE5 1360 aa21.75■■□□□ 1.07
SNHG17-202ENST00000414142 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
SNHG17-202ENST00000414142 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
SNHG17-202ENST00000414142 KIF21BO75037 1637 aa21.73■■□□□ 1.07
SNHG17-202ENST00000414142 PCGF6Q9BYE7 350 aa21.73■■□□□ 1.07
SNHG17-202ENST00000414142 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
SNHG17-202ENST00000414142 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
SNHG17-202ENST00000414142 FGD5Q6ZNL6 1462 aa21.64■■□□□ 1.06
SNHG17-202ENST00000414142 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
SNHG17-202ENST00000414142 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
SNHG17-202ENST00000414142 TRIM26Q12899 539 aaPredicted RBP21.61■■□□□ 1.05
SNHG17-202ENST00000414142 PDS5BQ9NTI5 1447 aa21.6■■□□□ 1.05
SNHG17-202ENST00000414142 CUX2O14529 1486 aa21.58■■□□□ 1.04
SNHG17-202ENST00000414142 TOPBP1Q92547 1522 aa21.58■■□□□ 1.04
SNHG17-202ENST00000414142 PRXQ9BXM0 1461 aa21.55■■□□□ 1.04
SNHG17-202ENST00000414142 ERICH3Q5RHP9 1530 aa21.53■■□□□ 1.04
SNHG17-202ENST00000414142 KIF21AQ7Z4S6 1674 aa21.5■■□□□ 1.03
SNHG17-202ENST00000414142 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
SNHG17-202ENST00000414142 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
SNHG17-202ENST00000414142 RAD54L2Q9Y4B4 1467 aa21.47■■□□□ 1.03
SNHG17-202ENST00000414142 CLIP1P30622 1438 aa21.46■■□□□ 1.03
SNHG17-202ENST00000414142 PPARGC1BQ86YN6 1023 aaKnown RBP21.46■■□□□ 1.03
SNHG17-202ENST00000414142 IGF1RP08069 1367 aa21.45■■□□□ 1.02
SNHG17-202ENST00000414142 HRCP23327 699 aa21.44■■□□□ 1.02
SNHG17-202ENST00000414142 RANGAP1P46060 587 aaPredicted RBP21.42■■□□□ 1.02
SNHG17-202ENST00000414142 ABCA10Q8WWZ4 1543 aa21.42■■□□□ 1.02
SNHG17-202ENST00000414142 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
SNHG17-202ENST00000414142 WDR97A6NE52 1622 aa21.31■■□□□ 1
SNHG17-202ENST00000414142 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
SNHG17-202ENST00000414142 VPS8Q8N3P4 1428 aa21.28■■□□□ 1
SNHG17-202ENST00000414142 TTBK1Q5TCY1 1321 aaPredicted RBP21.26■□□□□ 0.99
SNHG17-202ENST00000414142 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
SNHG17-202ENST00000414142 CUL7Q14999 1698 aa21.23■□□□□ 0.99
SNHG17-202ENST00000414142 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
SNHG17-202ENST00000414142 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
SNHG17-202ENST00000414142 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
SNHG17-202ENST00000414142 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
SNHG17-202ENST00000414142 ARAP1Q96P48 1450 aa21.19■□□□□ 0.98
SNHG17-202ENST00000414142 APLP2Q06481 763 aa21.19■□□□□ 0.98
SNHG17-202ENST00000414142 WDR62O43379 1518 aa21.14■□□□□ 0.98
SNHG17-202ENST00000414142 ARHGAP35Q9NRY4 1499 aa21.14■□□□□ 0.97
SNHG17-202ENST00000414142 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
SNHG17-202ENST00000414142 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.965e-7■■■■■ 27.6
SNHG17-202ENST00000414142 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
SNHG17-202ENST00000414142 CTTNBP2Q8WZ74 1663 aa21.05■□□□□ 0.96
SNHG17-202ENST00000414142 THOC2Q8NI27 1593 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms