Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 NPRL3-204ENST00000456528 794 ntTSL 521.92■■□□□ 1.11e-6■□□□□ 9.9
DROSHAQ9NRR4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.12e-9■□□□□ 9.9
DROSHAQ9NRR4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC21.72■■□□□ 1.071e-6■□□□□ 9.9
DROSHAQ9NRR4 TSC2-213ENST00000483020 563 ntTSL 421.03■□□□□ 0.964e-9■□□□□ 9.9
DROSHAQ9NRR4 DARS-203ENST00000435076 717 ntTSL 220.73■□□□□ 0.912e-17■□□□□ 9.9
DROSHAQ9NRR4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC20.36■□□□□ 0.851e-6■□□□□ 9.9
DROSHAQ9NRR4 TOMM7-204ENST00000463284 731 ntTSL 220.28■□□□□ 0.842e-9■□□□□ 9.9
DROSHAQ9NRR4 NPRL3-209ENST00000483663 932 ntTSL 319.8■□□□□ 0.761e-6■□□□□ 9.9
DROSHAQ9NRR4 CDK10-217ENST00000564192 897 ntTSL 519.47■□□□□ 0.716e-7■□□□□ 9.9
DROSHAQ9NRR4 BTNL9-204ENST00000506782 676 ntTSL 519.17■□□□□ 0.661e-6■□□□□ 9.9
DROSHAQ9NRR4 TSC2-212ENST00000471143 577 ntTSL 418.41■□□□□ 0.544e-9■□□□□ 9.9
DROSHAQ9NRR4 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC18.35■□□□□ 0.535e-8■□□□□ 9.9
DROSHAQ9NRR4 UBE3C-203ENST00000430750 448 ntTSL 417.94■□□□□ 0.461e-6■□□□□ 9.9
DROSHAQ9NRR4 NPRL3-207ENST00000468260 922 ntTSL 516.84■□□□□ 0.291e-6■□□□□ 9.9
DROSHAQ9NRR4 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC16.48■□□□□ 0.236e-7■□□□□ 9.9
DROSHAQ9NRR4 PDCD4-202ENST00000393104 3697 ntTSL 1 (best) BASIC16.23■□□□□ 0.191e-6■□□□□ 9.9
DROSHAQ9NRR4 CDK10-201ENST00000331006 3344 ntTSL 2 BASIC15.88■□□□□ 0.136e-7■□□□□ 9.9
DROSHAQ9NRR4 DARS-206ENST00000456565 731 ntTSL 314.38□□□□□ -0.112e-17■□□□□ 9.9
DROSHAQ9NRR4 TTLL4-202ENST00000392102 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.151e-6■□□□□ 9.9
DROSHAQ9NRR4 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.151e-6■□□□□ 9.9
DROSHAQ9NRR4 DARS-204ENST00000441323 651 ntTSL 312.25□□□□□ -0.452e-17■□□□□ 9.9
DROSHAQ9NRR4 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.521e-6■□□□□ 9.9
DROSHAQ9NRR4 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC11.68□□□□□ -0.542e-9■□□□□ 9.9
DROSHAQ9NRR4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC11.5□□□□□ -0.571e-6■□□□□ 9.9
DROSHAQ9NRR4 DARS-205ENST00000449218 543 ntTSL 310.9□□□□□ -0.672e-17■□□□□ 9.9
DROSHAQ9NRR4 TOMM7-206ENST00000496129 520 ntTSL 1 (best)8.52□□□□□ -1.052e-9■□□□□ 9.9
DROSHAQ9NRR4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.091e-6■□□□□ 9.9
DROSHAQ9NRR4 LINC00534-204ENST00000524361 620 ntTSL 39.71□□□□□ -0.861e-6■□□□□ 9.9
DROSHAQ9NRR4 LINC00534-202ENST00000523283 772 ntTSL 29.47□□□□□ -0.891e-6■□□□□ 9.9
DROSHAQ9NRR4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC9.47□□□□□ -0.891e-6■□□□□ 9.9
DROSHAQ9NRR4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.88□□□□□ -1.471e-6■□□□□ 9.9
DROSHAQ9NRR4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC40.08■■■■■ 4.019e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-207ENST00000577410 873 ntTSL 537.95■■■■□ 3.679e-8■□□□□ 9.9
DROSHAQ9NRR4 UBE2A-205ENST00000625379 704 ntTSL 337.49■■■■□ 3.599e-8■□□□□ 9.9
DROSHAQ9NRR4 FUBP3-203ENST00000467100 2228 ntTSL 236.13■■■■□ 3.379e-8■□□□□ 9.9
DROSHAQ9NRR4 HSPB1-203ENST00000447574 1455 ntTSL 1 (best)30.95■■■□□ 2.549e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-221ENST00000583181 505 ntTSL 530.92■■■□□ 2.549e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-216ENST00000581202 1013 ntTSL 530.26■■■□□ 2.439e-8■□□□□ 9.9
DROSHAQ9NRR4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.089e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-219ENST00000582585 891 ntTSL 528.04■■■□□ 2.089e-8■□□□□ 9.9
DROSHAQ9NRR4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC27.76■■■□□ 2.049e-8■□□□□ 9.9
DROSHAQ9NRR4 MAN2A2-206ENST00000558290 1049 ntTSL 527.69■■■□□ 2.029e-8■□□□□ 9.9
DROSHAQ9NRR4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.879e-8■□□□□ 9.9
DROSHAQ9NRR4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.89e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-224ENST00000584411 525 ntTSL 426.23■■□□□ 1.799e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-217ENST00000581743 785 ntTSL 526.15■■□□□ 1.789e-8■□□□□ 9.9
DROSHAQ9NRR4 MAN2A2-223ENST00000560534 361 ntTSL 525.99■■□□□ 1.759e-8■□□□□ 9.9
DROSHAQ9NRR4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.749e-8■□□□□ 9.9
DROSHAQ9NRR4 THAP3-206ENST00000484669 744 ntTSL 525.9■■□□□ 1.749e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-218ENST00000581795 1430 ntTSL 225.6■■□□□ 1.699e-8■□□□□ 9.9
DROSHAQ9NRR4 MAN2A2-210ENST00000558853 624 ntTSL 325.28■■□□□ 1.649e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-213ENST00000579198 599 ntTSL 524.86■■□□□ 1.579e-8■□□□□ 9.9
DROSHAQ9NRR4 NET1-203ENST00000449083 637 ntTSL 524.8■■□□□ 1.569e-8■□□□□ 9.9
DROSHAQ9NRR4 NET1-206ENST00000486354 599 ntTSL 324.8■■□□□ 1.569e-8■□□□□ 9.9
DROSHAQ9NRR4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.489e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-214ENST00000580296 733 ntTSL 324.08■■□□□ 1.459e-8■□□□□ 9.9
DROSHAQ9NRR4 MAN2A2-218ENST00000559999 529 ntTSL 423.83■■□□□ 1.419e-8■□□□□ 9.9
DROSHAQ9NRR4 MAN2A2-221ENST00000560451 5124 ntTSL 1 (best)23.79■■□□□ 1.49e-8■□□□□ 9.9
DROSHAQ9NRR4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.379e-8■□□□□ 9.9
DROSHAQ9NRR4 VPS26A-207ENST00000490696 800 ntTSL 523.64■■□□□ 1.379e-8■□□□□ 9.9
DROSHAQ9NRR4 THAP3-208ENST00000487819 840 ntTSL 223.08■■□□□ 1.299e-8■□□□□ 9.9
DROSHAQ9NRR4 THAP3-207ENST00000484676 879 ntTSL 523.03■■□□□ 1.289e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-210ENST00000578082 841 ntTSL 422.31■■□□□ 1.169e-8■□□□□ 9.9
DROSHAQ9NRR4 NARF-223ENST00000584192 495 ntTSL 322.24■■□□□ 1.159e-8■□□□□ 9.9
DROSHAQ9NRR4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.069e-8■□□□□ 9.9
DROSHAQ9NRR4 VPS26A-205ENST00000489656 817 ntTSL 521.64■■□□□ 1.069e-8■□□□□ 9.9
DROSHAQ9NRR4 VPS26A-209ENST00000497564 462 ntTSL 521.64■■□□□ 1.069e-8■□□□□ 9.9
DROSHAQ9NRR4 THAP3-204ENST00000472925 983 ntAPPRIS ALT2 TSL 221.48■■□□□ 1.039e-8■□□□□ 9.9
DROSHAQ9NRR4 DNMT1-204ENST00000585843 911 ntTSL 321.37■■□□□ 1.019e-8■□□□□ 9.9
DROSHAQ9NRR4 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC20.95■□□□□ 0.949e-8■□□□□ 9.9
DROSHAQ9NRR4 PTDSS2-213ENST00000532614 437 ntTSL 320.59■□□□□ 0.899e-8■□□□□ 9.9
DROSHAQ9NRR4 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC19.86■□□□□ 0.779e-8■□□□□ 9.9
DROSHAQ9NRR4 VPS26A-204ENST00000467852 666 ntTSL 319.83■□□□□ 0.779e-8■□□□□ 9.9
DROSHAQ9NRR4 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC19.5■□□□□ 0.719e-8■□□□□ 9.9
DROSHAQ9NRR4 UBE2A-204ENST00000469205 686 ntTSL 218.8■□□□□ 0.69e-8■□□□□ 9.9
DROSHAQ9NRR4 UBE2A-211ENST00000631185 1435 ntTSL 5 BASIC18.74■□□□□ 0.599e-8■□□□□ 9.9
DROSHAQ9NRR4 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.582e-7■□□□□ 9.9
DROSHAQ9NRR4 NARF-215ENST00000580748 577 ntTSL 518.08■□□□□ 0.499e-8■□□□□ 9.9
DROSHAQ9NRR4 UBE2A-201ENST00000346330 718 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.369e-8■□□□□ 9.9
DROSHAQ9NRR4 UBE2A-209ENST00000629303 557 ntTSL 417.27■□□□□ 0.359e-8■□□□□ 9.9
DROSHAQ9NRR4 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC16.91■□□□□ 0.39e-8■□□□□ 9.9
DROSHAQ9NRR4 DNMT1-228ENST00000592705 5215 ntTSL 1 (best)15.79■□□□□ 0.129e-8■□□□□ 9.9
DROSHAQ9NRR4 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.119e-8■□□□□ 9.9
DROSHAQ9NRR4 ATP5I-202ENST00000505852 300 ntTSL 215.47■□□□□ 0.079e-8■□□□□ 9.9
DROSHAQ9NRR4 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC15.42■□□□□ 0.069e-8■□□□□ 9.9
DROSHAQ9NRR4 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.059e-8■□□□□ 9.9
DROSHAQ9NRR4 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.19e-8■□□□□ 9.9
DROSHAQ9NRR4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC23.38■■□□□ 1.332e-14■□□□□ 9.9
DROSHAQ9NRR4 PICALM-210ENST00000528411 586 ntTSL 522.99■■□□□ 1.272e-14■□□□□ 9.9
DROSHAQ9NRR4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.852e-14■□□□□ 9.9
DROSHAQ9NRR4 PICALM-203ENST00000525162 548 ntTSL 411.82□□□□□ -0.522e-14■□□□□ 9.9
DROSHAQ9NRR4 PICALM-208ENST00000528256 563 ntTSL 48.59□□□□□ -1.032e-14■□□□□ 9.9
DROSHAQ9NRR4 PICALM-217ENST00000531930 703 ntTSL 53.94□□□□□ -1.782e-14■□□□□ 9.9
DROSHAQ9NRR4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.27□□□□□ -2.052e-14■□□□□ 9.9
DROSHAQ9NRR4 ARHGEF10L-205ENST00000466782 482 ntTSL 316.34■□□□□ 0.212e-7■□□□□ 9.9
DROSHAQ9NRR4 ATXN2L-221ENST00000566946 2162 ntTSL 1 (best)30.52■■■□□ 2.485e-10■□□□□ 9.9
DROSHAQ9NRR4 ATXN2L-208ENST00000562583 1933 ntTSL 1 (best)27.36■■□□□ 1.975e-10■□□□□ 9.9
DROSHAQ9NRR4 ATXN2L-218ENST00000565971 3264 ntTSL 1 (best)19.83■□□□□ 0.765e-10■□□□□ 9.9
DROSHAQ9NRR4 ATXN2L-213ENST00000564162 770 ntTSL 527.62■■■□□ 2.015e-19■□□□□ 9.8
DROSHAQ9NRR4 PFKFB4-209ENST00000467176 643 ntTSL 321.78■■□□□ 1.083e-6■□□□□ 9.8
Retrieved 100 of 16,331 protein–RNA pairs in 623.9 ms