RNA–Protein interactions for RNA: ENST00000389103.4

UBE3C-202, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 5 BASIC

Gene UBE3C, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-202ENST00000389103 NISCHQ9Y2I1 1504 aa34.88■■■■□ 3.17
UBE3C-202ENST00000389103 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
UBE3C-202ENST00000389103 ABCC9O60706 1549 aa30.84■■■□□ 2.53
UBE3C-202ENST00000389103 RB1CC1Q8TDY2 1594 aa29.47■■■□□ 2.31
UBE3C-202ENST00000389103 NACADO15069 1562 aa29.34■■■□□ 2.29
UBE3C-202ENST00000389103 DCAF8L2P0C7V8 631 aa29.31■■■□□ 2.28
UBE3C-202ENST00000389103 MYO15BQ96JP2 1530 aa29.05■■■□□ 2.24
UBE3C-202ENST00000389103 ZCCHC6Q5VYS8 1495 aaKnown RBP28.99■■■□□ 2.23
UBE3C-202ENST00000389103 UNC13AQ9UPW8 1703 aa28.82■■■□□ 2.2
UBE3C-202ENST00000389103 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
UBE3C-202ENST00000389103 PABPN1Q86U42 306 aaKnown RBP eCLIP28.78■■■□□ 2.2
UBE3C-202ENST00000389103 DNAJC5BQ9UF47 199 aa28.65■■■□□ 2.18
UBE3C-202ENST00000389103 BICRAQ9NZM4 1560 aa28.63■■■□□ 2.17
UBE3C-202ENST00000389103 SCRIBQ14160 1630 aa28.43■■■□□ 2.14
UBE3C-202ENST00000389103 SHROOM4Q9ULL8 1493 aa28.23■■■□□ 2.11
UBE3C-202ENST00000389103 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.06
UBE3C-202ENST00000389103 CC2D2AQ9P2K1 1620 aa27.87■■■□□ 2.05
UBE3C-202ENST00000389103 CECR2Q9BXF3 1484 aa27.73■■■□□ 2.03
UBE3C-202ENST00000389103 SMARCA4P51532 1647 aa27.14■■□□□ 1.93
UBE3C-202ENST00000389103 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
UBE3C-202ENST00000389103 ATAD2BQ9ULI0 1458 aa27.08■■□□□ 1.93
UBE3C-202ENST00000389103 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
UBE3C-202ENST00000389103 SMARCA2P51531 1590 aa26.99■■□□□ 1.91
UBE3C-202ENST00000389103 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
UBE3C-202ENST00000389103 MROH2BQ7Z745 1585 aa26.91■■□□□ 1.9
UBE3C-202ENST00000389103 PEG3Q9GZU2 1588 aa26.86■■□□□ 1.89
UBE3C-202ENST00000389103 BAZ1BQ9UIG0 1483 aaKnown RBP26.83■■□□□ 1.89
UBE3C-202ENST00000389103 NESP48681 1621 aa26.61■■□□□ 1.85
UBE3C-202ENST00000389103 WIZO95785 1651 aa26.6■■□□□ 1.85
UBE3C-202ENST00000389103 ERCC6Q03468 1493 aa26.58■■□□□ 1.85
UBE3C-202ENST00000389103 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
UBE3C-202ENST00000389103 LAMC3Q9Y6N6 1575 aa26.43■■□□□ 1.82
UBE3C-202ENST00000389103 CUX2O14529 1486 aa26.4■■□□□ 1.82
UBE3C-202ENST00000389103 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
UBE3C-202ENST00000389103 TOP2AP11388 1531 aaKnown RBP26.27■■□□□ 1.8
UBE3C-202ENST00000389103 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
UBE3C-202ENST00000389103 THOC2Q8NI27 1593 aaKnown RBP26.25■■□□□ 1.79
UBE3C-202ENST00000389103 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
UBE3C-202ENST00000389103 CFTRP13569 1480 aa26.07■■□□□ 1.76
UBE3C-202ENST00000389103 MRC2Q9UBG0 1479 aa26.03■■□□□ 1.76
UBE3C-202ENST00000389103 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
UBE3C-202ENST00000389103 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
UBE3C-202ENST00000389103 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
UBE3C-202ENST00000389103 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
UBE3C-202ENST00000389103 WDR62O43379 1518 aa25.96■■□□□ 1.75
UBE3C-202ENST00000389103 PRDM2Q13029 1718 aa25.81■■□□□ 1.72
UBE3C-202ENST00000389103 URB2Q14146 1524 aaKnown RBP25.79■■□□□ 1.72
UBE3C-202ENST00000389103 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
UBE3C-202ENST00000389103 SUPT5HO00267 1087 aaKnown RBP25.55■■□□□ 1.68
UBE3C-202ENST00000389103 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
UBE3C-202ENST00000389103 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
UBE3C-202ENST00000389103 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
UBE3C-202ENST00000389103 ZNF608Q9ULD9 1512 aaPredicted RBP25.43■■□□□ 1.66
UBE3C-202ENST00000389103 POLA1P09884 1462 aaPredicted RBP25.32■■□□□ 1.64
UBE3C-202ENST00000389103 TARBP1Q13395 1621 aaKnown RBP25.3■■□□□ 1.64
UBE3C-202ENST00000389103 EIF4G3O43432 1585 aaKnown RBP25.29■■□□□ 1.64
UBE3C-202ENST00000389103 OSCARQ8IYS5 282 aa25.26■■□□□ 1.63
UBE3C-202ENST00000389103 CUX1P39880 1505 aa25.26■■□□□ 1.63
UBE3C-202ENST00000389103 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
UBE3C-202ENST00000389103 AQRO60306 1485 aaKnown RBP eCLIP25.23■■□□□ 1.632e-7■■■■■ 39.8
UBE3C-202ENST00000389103 FGD5Q6ZNL6 1462 aa25.22■■□□□ 1.63
UBE3C-202ENST00000389103 SOGA1O94964 1423 aa25.2■■□□□ 1.63
UBE3C-202ENST00000389103 TDRD9Q8NDG6 1382 aaKnown RBP25.13■■□□□ 1.61
UBE3C-202ENST00000389103 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
UBE3C-202ENST00000389103 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
UBE3C-202ENST00000389103 CHD1O14646 1710 aa25.02■■□□□ 1.6
UBE3C-202ENST00000389103 FBLN2P98095 1184 aa24.98■■□□□ 1.59
UBE3C-202ENST00000389103 SNAPC4Q5SXM2 1469 aa24.98■■□□□ 1.59
UBE3C-202ENST00000389103 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.58
UBE3C-202ENST00000389103 GRIN2BQ13224 1484 aa24.94■■□□□ 1.58
UBE3C-202ENST00000389103 ABCA10Q8WWZ4 1543 aa24.93■■□□□ 1.58
UBE3C-202ENST00000389103 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
UBE3C-202ENST00000389103 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
UBE3C-202ENST00000389103 BIVM-ERCC5R4GMW8 1640 aa24.92■■□□□ 1.58
UBE3C-202ENST00000389103 RIMBP3CA6NJZ7 1639 aa24.91■■□□□ 1.58
UBE3C-202ENST00000389103 RIMBP3BA6NNM3 1639 aa24.91■■□□□ 1.58
UBE3C-202ENST00000389103 RIMBP3Q9UFD9 1639 aa24.91■■□□□ 1.58
UBE3C-202ENST00000389103 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
UBE3C-202ENST00000389103 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
UBE3C-202ENST00000389103 ABCA5Q8WWZ7 1642 aa24.88■■□□□ 1.57
UBE3C-202ENST00000389103 ARHGEF11O15085 1522 aa24.88■■□□□ 1.57
UBE3C-202ENST00000389103 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
UBE3C-202ENST00000389103 CHMP7Q8WUX9 453 aaPredicted RBP24.83■■□□□ 1.57
UBE3C-202ENST00000389103 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
UBE3C-202ENST00000389103 CLASP1Q7Z460 1538 aa24.75■■□□□ 1.55
UBE3C-202ENST00000389103 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
UBE3C-202ENST00000389103 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
UBE3C-202ENST00000389103 ARAP1Q96P48 1450 aa24.66■■□□□ 1.54
UBE3C-202ENST00000389103 GRIN2AQ12879 1464 aa24.63■■□□□ 1.53
UBE3C-202ENST00000389103 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
UBE3C-202ENST00000389103 FHAD1B1AJZ9 1412 aa24.6■■□□□ 1.53
UBE3C-202ENST00000389103 CEP170Q5SW79 1584 aa24.54■■□□□ 1.52
UBE3C-202ENST00000389103 NUP160Q12769 1436 aa24.53■■□□□ 1.52
UBE3C-202ENST00000389103 KIF27Q86VH2 1401 aa24.43■■□□□ 1.5
UBE3C-202ENST00000389103 ERCC6L2Q5T890 1561 aa24.42■■□□□ 1.5
UBE3C-202ENST00000389103 IGF1RP08069 1367 aa24.4■■□□□ 1.5
UBE3C-202ENST00000389103 SHROOM2Q13796 1616 aa24.38■■□□□ 1.49
UBE3C-202ENST00000389103 CUL7Q14999 1698 aa24.32■■□□□ 1.48
UBE3C-202ENST00000389103 RUSC2Q8N2Y8 1516 aa24.31■■□□□ 1.48
UBE3C-202ENST00000389103 PRG4Q92954 1404 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms