RNA–Protein interactions for RNA: ENST00000469205.2

UBE2A-204, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2

Gene UBE2A, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-204ENST00000469205 NISCHQ9Y2I1 1504 aa29.27■■■□□ 2.28
UBE2A-204ENST00000469205 CCDC180Q9P1Z9 1646 aa25.88■■□□□ 1.73
UBE2A-204ENST00000469205 ABCC9O60706 1549 aa25.12■■□□□ 1.61
UBE2A-204ENST00000469205 MYO15BQ96JP2 1530 aa24.43■■□□□ 1.5
UBE2A-204ENST00000469205 NACADO15069 1562 aa24.41■■□□□ 1.5
UBE2A-204ENST00000469205 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
UBE2A-204ENST00000469205 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
UBE2A-204ENST00000469205 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.49
UBE2A-204ENST00000469205 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
UBE2A-204ENST00000469205 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
UBE2A-204ENST00000469205 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
UBE2A-204ENST00000469205 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
UBE2A-204ENST00000469205 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
UBE2A-204ENST00000469205 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
UBE2A-204ENST00000469205 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
UBE2A-204ENST00000469205 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
UBE2A-204ENST00000469205 CC2D2AQ9P2K1 1620 aa22.73■■□□□ 1.23
UBE2A-204ENST00000469205 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
UBE2A-204ENST00000469205 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
UBE2A-204ENST00000469205 SMARCA4P51532 1647 aa22.58■■□□□ 1.21
UBE2A-204ENST00000469205 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
UBE2A-204ENST00000469205 ATAD2BQ9ULI0 1458 aa22.53■■□□□ 1.2
UBE2A-204ENST00000469205 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
UBE2A-204ENST00000469205 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
UBE2A-204ENST00000469205 PEG3Q9GZU2 1588 aa22.47■■□□□ 1.19
UBE2A-204ENST00000469205 HMGXB3Q12766 1538 aa22.38■■□□□ 1.17
UBE2A-204ENST00000469205 RSF1Q96T23 1441 aaPredicted RBP22.38■■□□□ 1.17
UBE2A-204ENST00000469205 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
UBE2A-204ENST00000469205 WIZO95785 1651 aa22.16■■□□□ 1.14
UBE2A-204ENST00000469205 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
UBE2A-204ENST00000469205 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
UBE2A-204ENST00000469205 SUPT5HO00267 1087 aaKnown RBP21.86■■□□□ 1.09
UBE2A-204ENST00000469205 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
UBE2A-204ENST00000469205 CCDC88BA6NC98 1476 aa21.82■■□□□ 1.08
UBE2A-204ENST00000469205 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
UBE2A-204ENST00000469205 CFTRP13569 1480 aa21.78■■□□□ 1.08
UBE2A-204ENST00000469205 NESP48681 1621 aa21.76■■□□□ 1.07
UBE2A-204ENST00000469205 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
UBE2A-204ENST00000469205 FANCD2Q9BXW9 1451 aa21.57■■□□□ 1.04
UBE2A-204ENST00000469205 CEP164Q9UPV0 1460 aa21.52■■□□□ 1.03
UBE2A-204ENST00000469205 CUX2O14529 1486 aa21.51■■□□□ 1.03
UBE2A-204ENST00000469205 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.03
UBE2A-204ENST00000469205 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
UBE2A-204ENST00000469205 KIF21AQ7Z4S6 1674 aa21.41■■□□□ 1.02
UBE2A-204ENST00000469205 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
UBE2A-204ENST00000469205 PRDM2Q13029 1718 aa21.39■■□□□ 1.01
UBE2A-204ENST00000469205 THOC2Q8NI27 1593 aaKnown RBP21.39■■□□□ 1.01
UBE2A-204ENST00000469205 WDR62O43379 1518 aa21.36■■□□□ 1.01
UBE2A-204ENST00000469205 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
UBE2A-204ENST00000469205 TOPBP1Q92547 1522 aa21.22■□□□□ 0.99
UBE2A-204ENST00000469205 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
UBE2A-204ENST00000469205 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
UBE2A-204ENST00000469205 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
UBE2A-204ENST00000469205 CUX1P39880 1505 aa21.07■□□□□ 0.96
UBE2A-204ENST00000469205 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
UBE2A-204ENST00000469205 SOGA1O94964 1423 aa21.04■□□□□ 0.96
UBE2A-204ENST00000469205 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
UBE2A-204ENST00000469205 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
UBE2A-204ENST00000469205 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
UBE2A-204ENST00000469205 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
UBE2A-204ENST00000469205 WDR97A6NE52 1622 aa20.91■□□□□ 0.94
UBE2A-204ENST00000469205 RAD54L2Q9Y4B4 1467 aa20.91■□□□□ 0.94
UBE2A-204ENST00000469205 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
UBE2A-204ENST00000469205 SYNJ1O43426 1573 aa20.88■□□□□ 0.93
UBE2A-204ENST00000469205 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
UBE2A-204ENST00000469205 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
UBE2A-204ENST00000469205 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.937e-8■■■■□ 22.6
UBE2A-204ENST00000469205 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
UBE2A-204ENST00000469205 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
UBE2A-204ENST00000469205 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
UBE2A-204ENST00000469205 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
UBE2A-204ENST00000469205 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
UBE2A-204ENST00000469205 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
UBE2A-204ENST00000469205 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
UBE2A-204ENST00000469205 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
UBE2A-204ENST00000469205 CHMP7Q8WUX9 453 aaPredicted RBP20.65■□□□□ 0.9
UBE2A-204ENST00000469205 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.9
UBE2A-204ENST00000469205 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
UBE2A-204ENST00000469205 SYNJ2O15056 1496 aa20.61■□□□□ 0.89
UBE2A-204ENST00000469205 IGF1RP08069 1367 aa20.6■□□□□ 0.89
UBE2A-204ENST00000469205 FBLN2P98095 1184 aa20.58■□□□□ 0.89
UBE2A-204ENST00000469205 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.89
UBE2A-204ENST00000469205 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
UBE2A-204ENST00000469205 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
UBE2A-204ENST00000469205 CARMIL1Q5VZK9 1371 aa20.46■□□□□ 0.87
UBE2A-204ENST00000469205 EEA1Q15075 1411 aa20.46■□□□□ 0.87
UBE2A-204ENST00000469205 GRIN2AQ12879 1464 aa20.45■□□□□ 0.86
UBE2A-204ENST00000469205 ADAMTS12P58397 1594 aa20.45■□□□□ 0.86
UBE2A-204ENST00000469205 CUL7Q14999 1698 aa20.41■□□□□ 0.86
UBE2A-204ENST00000469205 NUP160Q12769 1436 aa20.4■□□□□ 0.86
UBE2A-204ENST00000469205 CSRNP3Q8WYN3 585 aa20.4■□□□□ 0.86
UBE2A-204ENST00000469205 CHD1O14646 1710 aa20.38■□□□□ 0.85
UBE2A-204ENST00000469205 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
UBE2A-204ENST00000469205 RAPGEF2Q9Y4G8 1499 aa20.33■□□□□ 0.85
UBE2A-204ENST00000469205 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
UBE2A-204ENST00000469205 PRXQ9BXM0 1461 aa20.31■□□□□ 0.84
UBE2A-204ENST00000469205 JPH4Q96JJ6 628 aa20.28■□□□□ 0.84
UBE2A-204ENST00000469205 KIAA0586Q9BVV6 1533 aa20.27■□□□□ 0.84
UBE2A-204ENST00000469205 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
UBE2A-204ENST00000469205 ARHGEF11O15085 1522 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 235.3 ms