RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 NISCHQ9Y2I1 1504 aa27.58■■■□□ 2.01
UBE2A-201ENST00000346330 ABCC9O60706 1549 aa24.91■■□□□ 1.58
UBE2A-201ENST00000346330 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
UBE2A-201ENST00000346330 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
UBE2A-201ENST00000346330 DNAJC5BQ9UF47 199 aa23.53■■□□□ 1.36
UBE2A-201ENST00000346330 NACADO15069 1562 aa23.36■■□□□ 1.33
UBE2A-201ENST00000346330 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.33
UBE2A-201ENST00000346330 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
UBE2A-201ENST00000346330 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
UBE2A-201ENST00000346330 BICRAQ9NZM4 1560 aa23.08■■□□□ 1.29
UBE2A-201ENST00000346330 MYO15BQ96JP2 1530 aa23■■□□□ 1.27
UBE2A-201ENST00000346330 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
UBE2A-201ENST00000346330 DCAF1Q9Y4B6 1507 aa22.72■■□□□ 1.23
UBE2A-201ENST00000346330 SCRIBQ14160 1630 aa22.64■■□□□ 1.22
UBE2A-201ENST00000346330 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
UBE2A-201ENST00000346330 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
UBE2A-201ENST00000346330 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
UBE2A-201ENST00000346330 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
UBE2A-201ENST00000346330 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.06
UBE2A-201ENST00000346330 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
UBE2A-201ENST00000346330 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
UBE2A-201ENST00000346330 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
UBE2A-201ENST00000346330 DNAJC5Q9H3Z4 198 aa21.51■■□□□ 1.03
UBE2A-201ENST00000346330 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
UBE2A-201ENST00000346330 NESP48681 1621 aa21.44■■□□□ 1.02
UBE2A-201ENST00000346330 CUX2O14529 1486 aa21.42■■□□□ 1.02
UBE2A-201ENST00000346330 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
UBE2A-201ENST00000346330 ERCC6Q03468 1493 aa21.39■■□□□ 1.02
UBE2A-201ENST00000346330 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
UBE2A-201ENST00000346330 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
UBE2A-201ENST00000346330 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
UBE2A-201ENST00000346330 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
UBE2A-201ENST00000346330 THOC2Q8NI27 1593 aaKnown RBP21.27■□□□□ 0.99
UBE2A-201ENST00000346330 KIF21AQ7Z4S6 1674 aa21.16■□□□□ 0.98
UBE2A-201ENST00000346330 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
UBE2A-201ENST00000346330 WIZO95785 1651 aa21.04■□□□□ 0.96
UBE2A-201ENST00000346330 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
UBE2A-201ENST00000346330 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
UBE2A-201ENST00000346330 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
UBE2A-201ENST00000346330 WDR62O43379 1518 aa20.87■□□□□ 0.93
UBE2A-201ENST00000346330 MRC2Q9UBG0 1479 aa20.86■□□□□ 0.93
UBE2A-201ENST00000346330 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
UBE2A-201ENST00000346330 CFTRP13569 1480 aa20.71■□□□□ 0.91
UBE2A-201ENST00000346330 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
UBE2A-201ENST00000346330 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
UBE2A-201ENST00000346330 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
UBE2A-201ENST00000346330 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
UBE2A-201ENST00000346330 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
UBE2A-201ENST00000346330 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
UBE2A-201ENST00000346330 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
UBE2A-201ENST00000346330 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
UBE2A-201ENST00000346330 OSCARQ8IYS5 282 aa20.33■□□□□ 0.85
UBE2A-201ENST00000346330 EIF4G3O43432 1585 aaKnown RBP20.3■□□□□ 0.84
UBE2A-201ENST00000346330 RIMBP3CA6NJZ7 1639 aa20.3■□□□□ 0.84
UBE2A-201ENST00000346330 RIMBP3BA6NNM3 1639 aa20.3■□□□□ 0.84
UBE2A-201ENST00000346330 RIMBP3Q9UFD9 1639 aa20.3■□□□□ 0.84
UBE2A-201ENST00000346330 IFT140Q96RY7 1462 aa20.29■□□□□ 0.84
UBE2A-201ENST00000346330 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
UBE2A-201ENST00000346330 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
UBE2A-201ENST00000346330 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
UBE2A-201ENST00000346330 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
UBE2A-201ENST00000346330 CHD1O14646 1710 aa20.17■□□□□ 0.82
UBE2A-201ENST00000346330 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
UBE2A-201ENST00000346330 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.827e-8■■■■□ 22.6
UBE2A-201ENST00000346330 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
UBE2A-201ENST00000346330 RAD54L2Q9Y4B4 1467 aa20.1■□□□□ 0.81
UBE2A-201ENST00000346330 TDRD9Q8NDG6 1382 aaKnown RBP20.05■□□□□ 0.8
UBE2A-201ENST00000346330 ARAP1Q96P48 1450 aa20.03■□□□□ 0.8
UBE2A-201ENST00000346330 CUX1P39880 1505 aa20.02■□□□□ 0.79
UBE2A-201ENST00000346330 SOGA1O94964 1423 aa20.02■□□□□ 0.79
UBE2A-201ENST00000346330 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
UBE2A-201ENST00000346330 FBLN2P98095 1184 aa19.99■□□□□ 0.79
UBE2A-201ENST00000346330 SUPT5HO00267 1087 aaKnown RBP19.97■□□□□ 0.79
UBE2A-201ENST00000346330 WDR97A6NE52 1622 aa19.96■□□□□ 0.79
UBE2A-201ENST00000346330 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
UBE2A-201ENST00000346330 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
UBE2A-201ENST00000346330 CYB5RLQ6IPT4 315 aa19.91■□□□□ 0.78
UBE2A-201ENST00000346330 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
UBE2A-201ENST00000346330 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
UBE2A-201ENST00000346330 MAGI1Q96QZ7 1491 aaPredicted RBP19.81■□□□□ 0.76
UBE2A-201ENST00000346330 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
UBE2A-201ENST00000346330 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
UBE2A-201ENST00000346330 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
UBE2A-201ENST00000346330 SYNJ2O15056 1496 aa19.77■□□□□ 0.76
UBE2A-201ENST00000346330 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
UBE2A-201ENST00000346330 ABCA10Q8WWZ4 1543 aa19.74■□□□□ 0.75
UBE2A-201ENST00000346330 ERCC6L2Q5T890 1561 aa19.7■□□□□ 0.74
UBE2A-201ENST00000346330 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
UBE2A-201ENST00000346330 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
UBE2A-201ENST00000346330 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
UBE2A-201ENST00000346330 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
UBE2A-201ENST00000346330 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
UBE2A-201ENST00000346330 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
UBE2A-201ENST00000346330 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
UBE2A-201ENST00000346330 NUP160Q12769 1436 aa19.55■□□□□ 0.72
UBE2A-201ENST00000346330 SHROOM2Q13796 1616 aa19.53■□□□□ 0.72
UBE2A-201ENST00000346330 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
UBE2A-201ENST00000346330 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
UBE2A-201ENST00000346330 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
UBE2A-201ENST00000346330 KIF13AQ9H1H9 1805 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms