RNA–Protein interactions for RNA: ENST00000248553.6

HSPB1-201, Transcript of heat shock protein family B (small) member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPB1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPB1-201ENST00000248553 NISCHQ9Y2I1 1504 aa42.85■■■■■ 4.45
HSPB1-201ENST00000248553 CCDC180Q9P1Z9 1646 aa38.43■■■■□ 3.74
HSPB1-201ENST00000248553 ABCC9O60706 1549 aa38.22■■■■□ 3.71
HSPB1-201ENST00000248553 RB1CC1Q8TDY2 1594 aa36.42■■■■□ 3.42
HSPB1-201ENST00000248553 NACADO15069 1562 aa36.2■■■■□ 3.39
HSPB1-201ENST00000248553 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
HSPB1-201ENST00000248553 UNC13AQ9UPW8 1703 aa35.82■■■■□ 3.32
HSPB1-201ENST00000248553 MYO15BQ96JP2 1530 aa35.74■■■■□ 3.31
HSPB1-201ENST00000248553 DNAJC5BQ9UF47 199 aa35.71■■■■□ 3.31
HSPB1-201ENST00000248553 ZCCHC6Q5VYS8 1495 aaKnown RBP35.58■■■■□ 3.29
HSPB1-201ENST00000248553 PABPN1Q86U42 306 aaKnown RBP eCLIP35.56■■■■□ 3.28
HSPB1-201ENST00000248553 BICRAQ9NZM4 1560 aa35.48■■■■□ 3.27
HSPB1-201ENST00000248553 DCAF1Q9Y4B6 1507 aa35.37■■■■□ 3.25
HSPB1-201ENST00000248553 SCRIBQ14160 1630 aa35.04■■■■□ 3.2
HSPB1-201ENST00000248553 SHROOM4Q9ULL8 1493 aa34.84■■■■□ 3.17
HSPB1-201ENST00000248553 CC2D2AQ9P2K1 1620 aa34.57■■■■□ 3.12
HSPB1-201ENST00000248553 EIF4G1Q04637 1599 aaKnown RBP34.53■■■■□ 3.12
HSPB1-201ENST00000248553 CECR2Q9BXF3 1484 aa34.38■■■■□ 3.09
HSPB1-201ENST00000248553 SMARCA4P51532 1647 aa33.44■■■□□ 2.94
HSPB1-201ENST00000248553 NCAPD3P42695 1498 aa33.41■■■□□ 2.94
HSPB1-201ENST00000248553 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
HSPB1-201ENST00000248553 SMARCA2P51531 1590 aa33.26■■■□□ 2.91
HSPB1-201ENST00000248553 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
HSPB1-201ENST00000248553 BAZ1AQ9NRL2 1556 aaPredicted RBP33.22■■■□□ 2.91
HSPB1-201ENST00000248553 PEG3Q9GZU2 1588 aa33.09■■■□□ 2.89
HSPB1-201ENST00000248553 MROH2BQ7Z745 1585 aa33.07■■■□□ 2.88
HSPB1-201ENST00000248553 BAZ1BQ9UIG0 1483 aaKnown RBP33.03■■■□□ 2.88
HSPB1-201ENST00000248553 NESP48681 1621 aa32.93■■■□□ 2.86
HSPB1-201ENST00000248553 ERCC6Q03468 1493 aa32.91■■■□□ 2.86
HSPB1-201ENST00000248553 CUX2O14529 1486 aa32.8■■■□□ 2.84
HSPB1-201ENST00000248553 WIZO95785 1651 aa32.72■■■□□ 2.83
HSPB1-201ENST00000248553 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
HSPB1-201ENST00000248553 THOC2Q8NI27 1593 aaKnown RBP32.6■■■□□ 2.81
HSPB1-201ENST00000248553 KIF21AQ7Z4S6 1674 aa32.58■■■□□ 2.81
HSPB1-201ENST00000248553 DNAJC5Q9H3Z4 198 aa32.55■■■□□ 2.8
HSPB1-201ENST00000248553 RSF1Q96T23 1441 aaPredicted RBP32.39■■■□□ 2.78
HSPB1-201ENST00000248553 PDS5BQ9NTI5 1447 aa32.37■■■□□ 2.77
HSPB1-201ENST00000248553 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
HSPB1-201ENST00000248553 TOP2AP11388 1531 aaKnown RBP32.25■■■□□ 2.75
HSPB1-201ENST00000248553 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
HSPB1-201ENST00000248553 WDR62O43379 1518 aa32.13■■■□□ 2.73
HSPB1-201ENST00000248553 CFTRP13569 1480 aa32.09■■■□□ 2.73
HSPB1-201ENST00000248553 CEP164Q9UPV0 1460 aa32.06■■■□□ 2.72
HSPB1-201ENST00000248553 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
HSPB1-201ENST00000248553 PRDM2Q13029 1718 aa31.93■■■□□ 2.7
HSPB1-201ENST00000248553 CCDC88BA6NC98 1476 aa31.86■■■□□ 2.69
HSPB1-201ENST00000248553 URB2Q14146 1524 aaKnown RBP31.84■■■□□ 2.69
HSPB1-201ENST00000248553 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
HSPB1-201ENST00000248553 ZNF608Q9ULD9 1512 aaPredicted RBP31.43■■■□□ 2.62
HSPB1-201ENST00000248553 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
HSPB1-201ENST00000248553 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
HSPB1-201ENST00000248553 ABCC8Q09428 1581 aa31.32■■■□□ 2.6
HSPB1-201ENST00000248553 EIF4G3O43432 1585 aaKnown RBP31.29■■■□□ 2.6
HSPB1-201ENST00000248553 TARBP1Q13395 1621 aaKnown RBP31.27■■■□□ 2.6
HSPB1-201ENST00000248553 OSCARQ8IYS5 282 aa31.24■■■□□ 2.59
HSPB1-201ENST00000248553 TRIM41Q8WV44 630 aa31.21■■■□□ 2.59
HSPB1-201ENST00000248553 POLA1P09884 1462 aaPredicted RBP31.19■■■□□ 2.58
HSPB1-201ENST00000248553 AQRO60306 1485 aaKnown RBP eCLIP31.11■■■□□ 2.571e-11■■■■■ 32.1
HSPB1-201ENST00000248553 RAD54L2Q9Y4B4 1467 aa31.08■■■□□ 2.57
HSPB1-201ENST00000248553 CHD1O14646 1710 aa31.07■■■□□ 2.56
HSPB1-201ENST00000248553 CUX1P39880 1505 aa31.06■■■□□ 2.56
HSPB1-201ENST00000248553 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
HSPB1-201ENST00000248553 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
HSPB1-201ENST00000248553 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
HSPB1-201ENST00000248553 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.56
HSPB1-201ENST00000248553 SUPT5HO00267 1087 aaKnown RBP31■■■□□ 2.55
HSPB1-201ENST00000248553 SOGA1O94964 1423 aa30.98■■■□□ 2.55
HSPB1-201ENST00000248553 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
HSPB1-201ENST00000248553 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
HSPB1-201ENST00000248553 ARHGEF11O15085 1522 aa30.9■■■□□ 2.54
HSPB1-201ENST00000248553 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.52
HSPB1-201ENST00000248553 FBLN2P98095 1184 aa30.76■■■□□ 2.51
HSPB1-201ENST00000248553 PBRM1Q86U86 1689 aa30.74■■■□□ 2.51
HSPB1-201ENST00000248553 GRIN2BQ13224 1484 aa30.7■■■□□ 2.51
HSPB1-201ENST00000248553 MAGI1Q96QZ7 1491 aaPredicted RBP30.69■■■□□ 2.5
HSPB1-201ENST00000248553 ABCA5Q8WWZ7 1642 aa30.68■■■□□ 2.5
HSPB1-201ENST00000248553 CLASP1Q7Z460 1538 aa30.65■■■□□ 2.5
HSPB1-201ENST00000248553 ABCA10Q8WWZ4 1543 aa30.65■■■□□ 2.5
HSPB1-201ENST00000248553 BIVM-ERCC5R4GMW8 1640 aa30.63■■■□□ 2.49
HSPB1-201ENST00000248553 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
HSPB1-201ENST00000248553 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
HSPB1-201ENST00000248553 SYNJ1O43426 1573 aa30.61■■■□□ 2.49
HSPB1-201ENST00000248553 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
HSPB1-201ENST00000248553 TOP2BQ02880 1626 aa30.58■■■□□ 2.49
HSPB1-201ENST00000248553 CYB5RLQ6IPT4 315 aa30.55■■■□□ 2.48
HSPB1-201ENST00000248553 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
HSPB1-201ENST00000248553 WRNQ14191 1432 aaPredicted RBP eCLIP30.51■■■□□ 2.47
HSPB1-201ENST00000248553 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
HSPB1-201ENST00000248553 GRIN2AQ12879 1464 aa30.34■■■□□ 2.45
HSPB1-201ENST00000248553 CEP170Q5SW79 1584 aa30.3■■■□□ 2.44
HSPB1-201ENST00000248553 ERICH3Q5RHP9 1530 aa30.26■■■□□ 2.43
HSPB1-201ENST00000248553 ERCC6L2Q5T890 1561 aa30.24■■■□□ 2.43
HSPB1-201ENST00000248553 NUP160Q12769 1436 aa30.23■■■□□ 2.43
HSPB1-201ENST00000248553 FHAD1B1AJZ9 1412 aa30.22■■■□□ 2.43
HSPB1-201ENST00000248553 SHROOM2Q13796 1616 aa30.15■■■□□ 2.42
HSPB1-201ENST00000248553 TRHP20396 242 aaPredicted RBP30.11■■■□□ 2.41
HSPB1-201ENST00000248553 RUSC2Q8N2Y8 1516 aa30■■■□□ 2.39
HSPB1-201ENST00000248553 PRG4Q92954 1404 aaPredicted RBP29.89■■■□□ 2.38
HSPB1-201ENST00000248553 CUL7Q14999 1698 aa29.89■■■□□ 2.38
HSPB1-201ENST00000248553 IGF1RP08069 1367 aa29.89■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms