RNA–Protein interactions for RNA: ENST00000585843.1

DNMT1-204, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 911 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-204ENST00000585843 NISCHQ9Y2I1 1504 aa33.75■■■□□ 2.99
DNMT1-204ENST00000585843 CCDC180Q9P1Z9 1646 aa29.95■■■□□ 2.38
DNMT1-204ENST00000585843 ABCC9O60706 1549 aa29.31■■■□□ 2.28
DNMT1-204ENST00000585843 DCAF8L2P0C7V8 631 aa28.27■■■□□ 2.12
DNMT1-204ENST00000585843 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.11
DNMT1-204ENST00000585843 NACADO15069 1562 aa28.19■■■□□ 2.1
DNMT1-204ENST00000585843 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
DNMT1-204ENST00000585843 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
DNMT1-204ENST00000585843 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
DNMT1-204ENST00000585843 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
DNMT1-204ENST00000585843 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
DNMT1-204ENST00000585843 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
DNMT1-204ENST00000585843 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
DNMT1-204ENST00000585843 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
DNMT1-204ENST00000585843 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
DNMT1-204ENST00000585843 EIF4G1Q04637 1599 aaKnown RBP26.61■■□□□ 1.85
DNMT1-204ENST00000585843 CC2D2AQ9P2K1 1620 aa26.49■■□□□ 1.83
DNMT1-204ENST00000585843 CECR2Q9BXF3 1484 aa26.34■■□□□ 1.81
DNMT1-204ENST00000585843 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
DNMT1-204ENST00000585843 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
DNMT1-204ENST00000585843 ATAD2BQ9ULI0 1458 aa26.03■■□□□ 1.76
DNMT1-204ENST00000585843 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
DNMT1-204ENST00000585843 SMARCA2P51531 1590 aa26.01■■□□□ 1.75
DNMT1-204ENST00000585843 MROH2BQ7Z745 1585 aa26■■□□□ 1.75
DNMT1-204ENST00000585843 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
DNMT1-204ENST00000585843 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
DNMT1-204ENST00000585843 BAZ1BQ9UIG0 1483 aaKnown RBP25.83■■□□□ 1.73
DNMT1-204ENST00000585843 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
DNMT1-204ENST00000585843 WIZO95785 1651 aa25.71■■□□□ 1.71
DNMT1-204ENST00000585843 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
DNMT1-204ENST00000585843 NESP48681 1621 aa25.36■■□□□ 1.65
DNMT1-204ENST00000585843 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
DNMT1-204ENST00000585843 ERCC6Q03468 1493 aa25.28■■□□□ 1.64
DNMT1-204ENST00000585843 CADPSQ9ULU8 1353 aa25.28■■□□□ 1.64
DNMT1-204ENST00000585843 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
DNMT1-204ENST00000585843 SUPT5HO00267 1087 aaKnown RBP25.18■■□□□ 1.62
DNMT1-204ENST00000585843 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
DNMT1-204ENST00000585843 CFTRP13569 1480 aa25.12■■□□□ 1.61
DNMT1-204ENST00000585843 KIF21AQ7Z4S6 1674 aa25.03■■□□□ 1.6
DNMT1-204ENST00000585843 CUX2O14529 1486 aa24.97■■□□□ 1.59
DNMT1-204ENST00000585843 FANCD2Q9BXW9 1451 aa24.97■■□□□ 1.59
DNMT1-204ENST00000585843 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
DNMT1-204ENST00000585843 THOC2Q8NI27 1593 aaKnown RBP24.93■■□□□ 1.58
DNMT1-204ENST00000585843 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.57
DNMT1-204ENST00000585843 PRDM2Q13029 1718 aa24.86■■□□□ 1.57
DNMT1-204ENST00000585843 WDR62O43379 1518 aa24.78■■□□□ 1.56
DNMT1-204ENST00000585843 URB2Q14146 1524 aaKnown RBP24.71■■□□□ 1.55
DNMT1-204ENST00000585843 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
DNMT1-204ENST00000585843 TOPBP1Q92547 1522 aa24.57■■□□□ 1.52
DNMT1-204ENST00000585843 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
DNMT1-204ENST00000585843 IFT140Q96RY7 1462 aa24.43■■□□□ 1.5
DNMT1-204ENST00000585843 CUX1P39880 1505 aa24.39■■□□□ 1.49
DNMT1-204ENST00000585843 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
DNMT1-204ENST00000585843 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
DNMT1-204ENST00000585843 SOGA1O94964 1423 aa24.3■■□□□ 1.48
DNMT1-204ENST00000585843 ZNF608Q9ULD9 1512 aaPredicted RBP24.29■■□□□ 1.48
DNMT1-204ENST00000585843 TARBP1Q13395 1621 aaKnown RBP24.28■■□□□ 1.48
DNMT1-204ENST00000585843 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
DNMT1-204ENST00000585843 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
DNMT1-204ENST00000585843 DNAJC5Q9H3Z4 198 aa24.2■■□□□ 1.46
DNMT1-204ENST00000585843 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
DNMT1-204ENST00000585843 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.466e-8■■■■■ 34.6
DNMT1-204ENST00000585843 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
DNMT1-204ENST00000585843 EIF4G3O43432 1585 aaKnown RBP24.17■■□□□ 1.46
DNMT1-204ENST00000585843 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
DNMT1-204ENST00000585843 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
DNMT1-204ENST00000585843 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
DNMT1-204ENST00000585843 ABCA10Q8WWZ4 1543 aa24.08■■□□□ 1.45
DNMT1-204ENST00000585843 OSCARQ8IYS5 282 aa24.01■■□□□ 1.43
DNMT1-204ENST00000585843 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
DNMT1-204ENST00000585843 GRIN2BQ13224 1484 aa24■■□□□ 1.43
DNMT1-204ENST00000585843 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
DNMT1-204ENST00000585843 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
DNMT1-204ENST00000585843 FBLN2P98095 1184 aa23.93■■□□□ 1.42
DNMT1-204ENST00000585843 MAGI1Q96QZ7 1491 aaPredicted RBP23.92■■□□□ 1.42
DNMT1-204ENST00000585843 PBRM1Q86U86 1689 aa23.89■■□□□ 1.41
DNMT1-204ENST00000585843 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
DNMT1-204ENST00000585843 CHD1O14646 1710 aa23.84■■□□□ 1.41
DNMT1-204ENST00000585843 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
DNMT1-204ENST00000585843 ERICH3Q5RHP9 1530 aa23.79■■□□□ 1.4
DNMT1-204ENST00000585843 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
DNMT1-204ENST00000585843 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
DNMT1-204ENST00000585843 FHAD1B1AJZ9 1412 aa23.74■■□□□ 1.39
DNMT1-204ENST00000585843 ADAMTS12P58397 1594 aa23.72■■□□□ 1.39
DNMT1-204ENST00000585843 IGF1RP08069 1367 aa23.68■■□□□ 1.38
DNMT1-204ENST00000585843 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
DNMT1-204ENST00000585843 CLASP1Q7Z460 1538 aa23.61■■□□□ 1.37
DNMT1-204ENST00000585843 NUP160Q12769 1436 aa23.57■■□□□ 1.36
DNMT1-204ENST00000585843 CUL7Q14999 1698 aa23.57■■□□□ 1.36
DNMT1-204ENST00000585843 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
DNMT1-204ENST00000585843 ARHGEF11O15085 1522 aa23.55■■□□□ 1.36
DNMT1-204ENST00000585843 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
DNMT1-204ENST00000585843 RIMBP3CA6NJZ7 1639 aa23.54■■□□□ 1.36
DNMT1-204ENST00000585843 RIMBP3BA6NNM3 1639 aa23.54■■□□□ 1.36
DNMT1-204ENST00000585843 RIMBP3Q9UFD9 1639 aa23.54■■□□□ 1.36
DNMT1-204ENST00000585843 CEP170Q5SW79 1584 aa23.53■■□□□ 1.36
DNMT1-204ENST00000585843 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
DNMT1-204ENST00000585843 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
DNMT1-204ENST00000585843 RAPGEF2Q9Y4G8 1499 aa23.4■■□□□ 1.34
DNMT1-204ENST00000585843 JPH4Q96JJ6 628 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms