RNA–Protein interactions for RNA: ENST00000528256.1

PICALM-208, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 4

Gene PICALM, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-208ENST00000528256 AEBP2Q6ZN18 517 aaPredicted RBP29.22■■■□□ 2.27
PICALM-208ENST00000528256 CHIC1Q5VXU3 224 aa28.37■■■□□ 2.13
PICALM-208ENST00000528256 PHF23Q9BUL5 403 aaPredicted RBP24.93■■□□□ 1.58
PICALM-208ENST00000528256 SENP3Q9H4L4 574 aaPredicted RBP24.84■■□□□ 1.57
PICALM-208ENST00000528256 FOXD1Q16676 465 aa23.07■■□□□ 1.28
PICALM-208ENST00000528256 PLPPR3Q6T4P5 718 aa22.96■■□□□ 1.27
PICALM-208ENST00000528256 PPP6R1Q9UPN7 881 aa22.06■■□□□ 1.12
PICALM-208ENST00000528256 ADRA2BP18089 450 aa22.03■■□□□ 1.12
PICALM-208ENST00000528256 POTEDQ86YR6 584 aa21.79■■□□□ 1.08
PICALM-208ENST00000528256 PIAS4Q8N2W9 510 aaPredicted RBP21.72■■□□□ 1.07
PICALM-208ENST00000528256 MSH5O43196 834 aa21.35■■□□□ 1.01
PICALM-208ENST00000528256 PPP4R3CPQ6ZMV5 832 aa20.21■□□□□ 0.83
PICALM-208ENST00000528256 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
PICALM-208ENST00000528256 MAPK8IP2Q13387 824 aaPredicted RBP20.04■□□□□ 0.8
PICALM-208ENST00000528256 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
PICALM-208ENST00000528256 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
PICALM-208ENST00000528256 NCBP3Q53F19 620 aaKnown RBP19.63■□□□□ 0.73
PICALM-208ENST00000528256 KCNA4P22459 653 aa19.54■□□□□ 0.72
PICALM-208ENST00000528256 NPM3O75607 178 aaKnown RBP19.34■□□□□ 0.69
PICALM-208ENST00000528256 RNF216Q9NWF9 866 aaPredicted RBP19.34■□□□□ 0.69
PICALM-208ENST00000528256 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
PICALM-208ENST00000528256 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
PICALM-208ENST00000528256 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
PICALM-208ENST00000528256 CACNB1Q02641 598 aaPredicted RBP18.7■□□□□ 0.58
PICALM-208ENST00000528256 SLC4A1APQ9BWU0 796 aaKnown RBP18.57■□□□□ 0.56
PICALM-208ENST00000528256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.54
PICALM-208ENST00000528256 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
PICALM-208ENST00000528256 RNF39Q9H2S5 420 aa18.27■□□□□ 0.52
PICALM-208ENST00000528256 U3KPZ7 1027 aaPredicted RBP18.09■□□□□ 0.49
PICALM-208ENST00000528256 C1QBPQ07021 282 aaKnown RBP18.05■□□□□ 0.48
PICALM-208ENST00000528256 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
PICALM-208ENST00000528256 ZBTB22O15209 634 aa17.96■□□□□ 0.47
PICALM-208ENST00000528256 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
PICALM-208ENST00000528256 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
PICALM-208ENST00000528256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
PICALM-208ENST00000528256 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
PICALM-208ENST00000528256 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
PICALM-208ENST00000528256 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
PICALM-208ENST00000528256 APLP2Q06481 763 aa17.66■□□□□ 0.42
PICALM-208ENST00000528256 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
PICALM-208ENST00000528256 CAPN15O75808 1086 aa17.59■□□□□ 0.41
PICALM-208ENST00000528256 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
PICALM-208ENST00000528256 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
PICALM-208ENST00000528256 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
PICALM-208ENST00000528256 ATF5Q9Y2D1 282 aaPredicted RBP17.41■□□□□ 0.38
PICALM-208ENST00000528256 DSG3P32926 999 aa17.33■□□□□ 0.36
PICALM-208ENST00000528256 ABCB7O75027 752 aa17.23■□□□□ 0.35
PICALM-208ENST00000528256 POLA2Q14181 598 aa17.13■□□□□ 0.33
PICALM-208ENST00000528256 POTEHQ6S545 545 aa17■□□□□ 0.31
PICALM-208ENST00000528256 ZBTB12Q9Y330 459 aaPredicted RBP16.84■□□□□ 0.29
PICALM-208ENST00000528256 FBLN2P98095 1184 aa16.71■□□□□ 0.27
PICALM-208ENST00000528256 MKRN4PQ13434 485 aaPredicted RBP16.64■□□□□ 0.25
PICALM-208ENST00000528256 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
PICALM-208ENST00000528256 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
PICALM-208ENST00000528256 SPDYE2BA6NHP3 402 aa16.36■□□□□ 0.21
PICALM-208ENST00000528256 SPDYE6P0CI01 402 aa16.36■□□□□ 0.21
PICALM-208ENST00000528256 SPDYE2Q495Y8 402 aa16.36■□□□□ 0.21
PICALM-208ENST00000528256 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
PICALM-208ENST00000528256 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
PICALM-208ENST00000528256 SSUH2Q9Y2M2 353 aa16.22■□□□□ 0.19
PICALM-208ENST00000528256 SPDYE4A6NLX3 237 aa16.19■□□□□ 0.18
PICALM-208ENST00000528256 REM2Q8IYK8 340 aaPredicted RBP16.13■□□□□ 0.17
PICALM-208ENST00000528256 PABPN1Q86U42 306 aaKnown RBP eCLIP16.06■□□□□ 0.16
PICALM-208ENST00000528256 FKBP8Q14318 412 aa16.04■□□□□ 0.16
PICALM-208ENST00000528256 PITPNM1O00562 1244 aa15.94■□□□□ 0.14
PICALM-208ENST00000528256 SPDYE1Q8NFV5 336 aaPredicted RBP15.94■□□□□ 0.14
PICALM-208ENST00000528256 CHRDL2Q6WN34 429 aa15.91■□□□□ 0.14
PICALM-208ENST00000528256 PROM2Q8N271 834 aa15.88■□□□□ 0.13
PICALM-208ENST00000528256 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
PICALM-208ENST00000528256 STAG3Q9UJ98 1225 aa15.76■□□□□ 0.11
PICALM-208ENST00000528256 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
PICALM-208ENST00000528256 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.15e-15■■□□□ 11.9
PICALM-208ENST00000528256 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
PICALM-208ENST00000528256 SP7Q8TDD2 431 aaPredicted RBP15.65■□□□□ 0.1
PICALM-208ENST00000528256 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
PICALM-208ENST00000528256 FBXO3Q9UK99 471 aa15.52■□□□□ 0.08
PICALM-208ENST00000528256 CHADLQ6NUI6 762 aa15.49■□□□□ 0.07
PICALM-208ENST00000528256 CREBZFQ9NS37 354 aa15.46■□□□□ 0.07
PICALM-208ENST00000528256 MIER1Q8N108 512 aa15.38■□□□□ 0.05
PICALM-208ENST00000528256 PLCD3Q8N3E9 789 aa15.34■□□□□ 0.05
PICALM-208ENST00000528256 FARP1Q9Y4F1 1045 aaPredicted RBP15.34■□□□□ 0.05
PICALM-208ENST00000528256 HAX1O00165 279 aa15.32■□□□□ 0.04
PICALM-208ENST00000528256 PLEKHG5O94827 1062 aa15.32■□□□□ 0.04
PICALM-208ENST00000528256 VASPP50552 380 aaPredicted RBP15.31■□□□□ 0.04
PICALM-208ENST00000528256 MNX1P50219 401 aaPredicted RBP15.26■□□□□ 0.03
PICALM-208ENST00000528256 NPM1P06748 294 aaKnown RBP eCLIP15.2■□□□□ 0.02
PICALM-208ENST00000528256 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
PICALM-208ENST00000528256 C19orf67A6NJJ6 358 aa15.14■□□□□ 0.01
PICALM-208ENST00000528256 KLHL34Q8N239 644 aa15.1■□□□□ 0.01
PICALM-208ENST00000528256 CD44P16070 742 aaKnown RBP15.09■□□□□ 0.01
PICALM-208ENST00000528256 IFNLR1Q8IU57 520 aaPredicted RBP15.09■□□□□ 0.01
PICALM-208ENST00000528256 EVX2Q03828 476 aa15.07■□□□□ 0
PICALM-208ENST00000528256 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
PICALM-208ENST00000528256 NUBP1P53384 320 aa15□□□□□ -0.01
PICALM-208ENST00000528256 ZRANB1Q9UGI0 708 aa14.98□□□□□ -0.01
PICALM-208ENST00000528256 RASEFQ8IZ41 740 aa14.97□□□□□ -0.01
PICALM-208ENST00000528256 TSPYL2Q9H2G4 693 aaPredicted RBP14.96□□□□□ -0.01
PICALM-208ENST00000528256 SPOCK2Q92563 424 aa14.95□□□□□ -0.02
PICALM-208ENST00000528256 FAM212AQ96EL1 285 aa14.89□□□□□ -0.03
PICALM-208ENST00000528256 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
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