RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
LINC00534-204ENST00000524361 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
LINC00534-204ENST00000524361 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
LINC00534-204ENST00000524361 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
LINC00534-204ENST00000524361 FOXD1Q16676 465 aa15.52■□□□□ 0.08
LINC00534-204ENST00000524361 NISCHQ9Y2I1 1504 aa15.27■□□□□ 0.04
LINC00534-204ENST00000524361 PLPPR3Q6T4P5 718 aa14.78□□□□□ -0.04
LINC00534-204ENST00000524361 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
LINC00534-204ENST00000524361 ADRA2BP18089 450 aa14.5□□□□□ -0.09
LINC00534-204ENST00000524361 PIAS4Q8N2W9 510 aaPredicted RBP14.45□□□□□ -0.1
LINC00534-204ENST00000524361 MSH5O43196 834 aa14.42□□□□□ -0.1
LINC00534-204ENST00000524361 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
LINC00534-204ENST00000524361 ABCC9O60706 1549 aa13.82□□□□□ -0.2
LINC00534-204ENST00000524361 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
LINC00534-204ENST00000524361 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
LINC00534-204ENST00000524361 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
LINC00534-204ENST00000524361 DMRT2Q9Y5R5 561 aa13.19□□□□□ -0.3
LINC00534-204ENST00000524361 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
LINC00534-204ENST00000524361 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
LINC00534-204ENST00000524361 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
LINC00534-204ENST00000524361 RB1CC1Q8TDY2 1594 aa12.99□□□□□ -0.33
LINC00534-204ENST00000524361 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC00534-204ENST00000524361 NACADO15069 1562 aa12.9□□□□□ -0.34
LINC00534-204ENST00000524361 HOXD11P31277 338 aaPredicted RBP12.72□□□□□ -0.37
LINC00534-204ENST00000524361 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
LINC00534-204ENST00000524361 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
LINC00534-204ENST00000524361 BICRAQ9NZM4 1560 aa12.64□□□□□ -0.39
LINC00534-204ENST00000524361 ZCCHC6Q5VYS8 1495 aaKnown RBP12.62□□□□□ -0.39
LINC00534-204ENST00000524361 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
LINC00534-204ENST00000524361 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
LINC00534-204ENST00000524361 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
LINC00534-204ENST00000524361 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.4
LINC00534-204ENST00000524361 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
LINC00534-204ENST00000524361 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
LINC00534-204ENST00000524361 CECR2Q9BXF3 1484 aa12.41□□□□□ -0.42
LINC00534-204ENST00000524361 RNF39Q9H2S5 420 aa12.38□□□□□ -0.43
LINC00534-204ENST00000524361 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
LINC00534-204ENST00000524361 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
LINC00534-204ENST00000524361 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
LINC00534-204ENST00000524361 NPM3O75607 178 aaKnown RBP12.35□□□□□ -0.43
LINC00534-204ENST00000524361 EIF4G1Q04637 1599 aaKnown RBP12.34□□□□□ -0.43
LINC00534-204ENST00000524361 KCNA4P22459 653 aa12.15□□□□□ -0.46
LINC00534-204ENST00000524361 C1QBPQ07021 282 aaKnown RBP12.15□□□□□ -0.46
LINC00534-204ENST00000524361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC00534-204ENST00000524361 NCAPD3P42695 1498 aa11.98□□□□□ -0.49
LINC00534-204ENST00000524361 ATAD2BQ9ULI0 1458 aa11.96□□□□□ -0.49
LINC00534-204ENST00000524361 DNAJC5Q9H3Z4 198 aa11.95□□□□□ -0.5
LINC00534-204ENST00000524361 ERCC6Q03468 1493 aa11.9□□□□□ -0.5
LINC00534-204ENST00000524361 U3KPZ7 1027 aaPredicted RBP11.88□□□□□ -0.51
LINC00534-204ENST00000524361 NESP48681 1621 aa11.86□□□□□ -0.51
LINC00534-204ENST00000524361 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
LINC00534-204ENST00000524361 SMARCA2P51531 1590 aa11.85□□□□□ -0.51
LINC00534-204ENST00000524361 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
LINC00534-204ENST00000524361 SLC4A2P04920 1241 aa11.82□□□□□ -0.52
LINC00534-204ENST00000524361 MROH2BQ7Z745 1585 aa11.82□□□□□ -0.52
LINC00534-204ENST00000524361 BAZ1AQ9NRL2 1556 aaPredicted RBP11.81□□□□□ -0.52
LINC00534-204ENST00000524361 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
LINC00534-204ENST00000524361 CUX2O14529 1486 aa11.79□□□□□ -0.52
LINC00534-204ENST00000524361 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
LINC00534-204ENST00000524361 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.54
LINC00534-204ENST00000524361 PDS5BQ9NTI5 1447 aa11.67□□□□□ -0.54
LINC00534-204ENST00000524361 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
LINC00534-204ENST00000524361 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
LINC00534-204ENST00000524361 WIZO95785 1651 aa11.62□□□□□ -0.55
LINC00534-204ENST00000524361 CAPN15O75808 1086 aa11.61□□□□□ -0.55
LINC00534-204ENST00000524361 DSG3P32926 999 aa11.6□□□□□ -0.55
LINC00534-204ENST00000524361 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
LINC00534-204ENST00000524361 THOC2Q8NI27 1593 aaKnown RBP11.58□□□□□ -0.55
LINC00534-204ENST00000524361 KIF21AQ7Z4S6 1674 aa11.55□□□□□ -0.56
LINC00534-204ENST00000524361 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
LINC00534-204ENST00000524361 TRIM41Q8WV44 630 aa11.52□□□□□ -0.57
LINC00534-204ENST00000524361 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
LINC00534-204ENST00000524361 FANCD2Q9BXW9 1451 aa11.51□□□□□ -0.57
LINC00534-204ENST00000524361 CFTRP13569 1480 aa11.49□□□□□ -0.57
LINC00534-204ENST00000524361 CEP164Q9UPV0 1460 aa11.49□□□□□ -0.57
LINC00534-204ENST00000524361 WDR62O43379 1518 aa11.46□□□□□ -0.57
LINC00534-204ENST00000524361 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
LINC00534-204ENST00000524361 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
LINC00534-204ENST00000524361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
LINC00534-204ENST00000524361 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
LINC00534-204ENST00000524361 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
LINC00534-204ENST00000524361 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
LINC00534-204ENST00000524361 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
LINC00534-204ENST00000524361 SAMD1Q6SPF0 538 aaPredicted RBP11.41□□□□□ -0.58
LINC00534-204ENST00000524361 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
LINC00534-204ENST00000524361 APLP2Q06481 763 aa11.4□□□□□ -0.58
LINC00534-204ENST00000524361 ABCB7O75027 752 aa11.39□□□□□ -0.59
LINC00534-204ENST00000524361 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
LINC00534-204ENST00000524361 MYCNP04198 464 aaPredicted RBP11.36□□□□□ -0.59
LINC00534-204ENST00000524361 ZNF608Q9ULD9 1512 aaPredicted RBP11.31□□□□□ -0.6
LINC00534-204ENST00000524361 TOPBP1Q92547 1522 aa11.27□□□□□ -0.61
LINC00534-204ENST00000524361 FBLN2P98095 1184 aa11.27□□□□□ -0.61
LINC00534-204ENST00000524361 FOXD4L1Q9NU39 408 aa11.27□□□□□ -0.61
LINC00534-204ENST00000524361 IFT140Q96RY7 1462 aa11.26□□□□□ -0.61
LINC00534-204ENST00000524361 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
LINC00534-204ENST00000524361 SUPT5HO00267 1087 aaKnown RBP11.25□□□□□ -0.61
LINC00534-204ENST00000524361 AQRO60306 1485 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC00534-204ENST00000524361 ZBTB22O15209 634 aa11.23□□□□□ -0.61
LINC00534-204ENST00000524361 CYB5RLQ6IPT4 315 aa11.21□□□□□ -0.61
LINC00534-204ENST00000524361 ATF5Q9Y2D1 282 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms