RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 DCAF8L2P0C7V8 631 aa23.54■■□□□ 1.36
DNMT1-201ENST00000340748 NISCHQ9Y2I1 1504 aa22.73■■□□□ 1.23
DNMT1-201ENST00000340748 SHROOM4Q9ULL8 1493 aa21.26■□□□□ 0.99
DNMT1-201ENST00000340748 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
DNMT1-201ENST00000340748 FAM9AQ8IZU1 332 aaPredicted RBP20.61■□□□□ 0.89
DNMT1-201ENST00000340748 ABCC9O60706 1549 aa20.61■□□□□ 0.89
DNMT1-201ENST00000340748 EHMT2Q96KQ7 1210 aa20.5■□□□□ 0.87
DNMT1-201ENST00000340748 PABPN1Q86U42 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
DNMT1-201ENST00000340748 APLP2Q06481 763 aa20.07■□□□□ 0.8
DNMT1-201ENST00000340748 RANGAP1P46060 587 aaPredicted RBP20.01■□□□□ 0.79
DNMT1-201ENST00000340748 ATP1B4Q9UN42 357 aaPredicted RBP19.95■□□□□ 0.78
DNMT1-201ENST00000340748 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
DNMT1-201ENST00000340748 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
DNMT1-201ENST00000340748 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
DNMT1-201ENST00000340748 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
DNMT1-201ENST00000340748 MYT1LQ9UL68 1186 aa19.62■□□□□ 0.73
DNMT1-201ENST00000340748 ZEB1P37275 1124 aaPredicted RBP19.6■□□□□ 0.73
DNMT1-201ENST00000340748 UBTFP17480 764 aaKnown RBP19.58■□□□□ 0.72
DNMT1-201ENST00000340748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
DNMT1-201ENST00000340748 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
DNMT1-201ENST00000340748 FBLN2P98095 1184 aa19.46■□□□□ 0.71
DNMT1-201ENST00000340748 CCER1Q8TC90 406 aaPredicted RBP19.37■□□□□ 0.69
DNMT1-201ENST00000340748 CENPBP07199 599 aaPredicted RBP19.34■□□□□ 0.69
DNMT1-201ENST00000340748 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
DNMT1-201ENST00000340748 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
DNMT1-201ENST00000340748 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
DNMT1-201ENST00000340748 TRIM26Q12899 539 aaPredicted RBP19.07■□□□□ 0.64
DNMT1-201ENST00000340748 CCDC180Q9P1Z9 1646 aa19.05■□□□□ 0.64
DNMT1-201ENST00000340748 ERICH6Q7L0X2 663 aa18.93■□□□□ 0.62
DNMT1-201ENST00000340748 PPARGC1BQ86YN6 1023 aaKnown RBP18.88■□□□□ 0.61
DNMT1-201ENST00000340748 NEFLP07196 543 aa18.87■□□□□ 0.61
DNMT1-201ENST00000340748 NPM1P06748 294 aaKnown RBP eCLIP18.86■□□□□ 0.61
DNMT1-201ENST00000340748 HRCP23327 699 aa18.83■□□□□ 0.6
DNMT1-201ENST00000340748 LOC105371045A0A1W2PR82 267 aa18.78■□□□□ 0.6
DNMT1-201ENST00000340748 ITGAEP38570 1179 aa18.78■□□□□ 0.6
DNMT1-201ENST00000340748 YTHDC1Q96MU7 727 aaKnown RBP18.77■□□□□ 0.6
DNMT1-201ENST00000340748 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
DNMT1-201ENST00000340748 NACADO15069 1562 aa18.73■□□□□ 0.59
DNMT1-201ENST00000340748 ARID3CA6NKF2 412 aa18.68■□□□□ 0.58
DNMT1-201ENST00000340748 ZCCHC6Q5VYS8 1495 aaKnown RBP18.66■□□□□ 0.58
DNMT1-201ENST00000340748 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
DNMT1-201ENST00000340748 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.57
DNMT1-201ENST00000340748 ESF1Q9H501 851 aaKnown RBP18.63■□□□□ 0.57
DNMT1-201ENST00000340748 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
DNMT1-201ENST00000340748 MYT1Q01538 1121 aa18.55■□□□□ 0.56
DNMT1-201ENST00000340748 BCANQ96GW7 911 aa18.53■□□□□ 0.56
DNMT1-201ENST00000340748 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
DNMT1-201ENST00000340748 FAM50AQ14320 339 aaKnown RBP18.45■□□□□ 0.54
DNMT1-201ENST00000340748 SLC4A1APQ9BWU0 796 aaKnown RBP18.44■□□□□ 0.54
DNMT1-201ENST00000340748 ZNF777Q9ULD5 760 aaPredicted RBP18.41■□□□□ 0.54
DNMT1-201ENST00000340748 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
DNMT1-201ENST00000340748 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
DNMT1-201ENST00000340748 POLR3GLQ9BT43 218 aa18.39■□□□□ 0.53
DNMT1-201ENST00000340748 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
DNMT1-201ENST00000340748 DIEXFQ68CQ4 756 aaKnown RBP18.28■□□□□ 0.52
DNMT1-201ENST00000340748 STAG3Q9UJ98 1225 aa18.25■□□□□ 0.51
DNMT1-201ENST00000340748 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
DNMT1-201ENST00000340748 DAXXQ9UER7 740 aaPredicted RBP18.22■□□□□ 0.51
DNMT1-201ENST00000340748 CSRNP3Q8WYN3 585 aa18.21■□□□□ 0.51
DNMT1-201ENST00000340748 KCNH8Q96L42 1107 aa18.18■□□□□ 0.5
DNMT1-201ENST00000340748 ARID4BQ4LE39 1312 aaPredicted RBP18.17■□□□□ 0.5
DNMT1-201ENST00000340748 CHGAP10645 457 aaKnown RBP18.09■□□□□ 0.49
DNMT1-201ENST00000340748 CNGB1Q14028 1251 aaPredicted RBP18.09■□□□□ 0.49
DNMT1-201ENST00000340748 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
DNMT1-201ENST00000340748 NEUROD1Q13562 356 aa18.05■□□□□ 0.48
DNMT1-201ENST00000340748 ZNF326Q5BKZ1 582 aaKnown RBP18.03■□□□□ 0.48
DNMT1-201ENST00000340748 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
DNMT1-201ENST00000340748 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
DNMT1-201ENST00000340748 ANP32CO43423 234 aa17.96■□□□□ 0.46
DNMT1-201ENST00000340748 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
DNMT1-201ENST00000340748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.463e-7■■■■□ 23.2
DNMT1-201ENST00000340748 AEBP2Q6ZN18 517 aaPredicted RBP17.9■□□□□ 0.46
DNMT1-201ENST00000340748 RSF1Q96T23 1441 aaPredicted RBP17.9■□□□□ 0.46
DNMT1-201ENST00000340748 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
DNMT1-201ENST00000340748 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
DNMT1-201ENST00000340748 TSPY4P0CV99 314 aa17.88■□□□□ 0.45
DNMT1-201ENST00000340748 TSPY10P0CW01 314 aa17.88■□□□□ 0.45
DNMT1-201ENST00000340748 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
DNMT1-201ENST00000340748 C14orf37Q86TY3 774 aa17.82■□□□□ 0.44
DNMT1-201ENST00000340748 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
DNMT1-201ENST00000340748 SLC24A1O60721 1099 aa17.81■□□□□ 0.44
DNMT1-201ENST00000340748 RTL5Q5HYW3 569 aaPredicted RBP17.81■□□□□ 0.44
DNMT1-201ENST00000340748 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
DNMT1-201ENST00000340748 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
DNMT1-201ENST00000340748 PPP1R15AO75807 674 aaPredicted RBP17.78■□□□□ 0.44
DNMT1-201ENST00000340748 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
DNMT1-201ENST00000340748 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
DNMT1-201ENST00000340748 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
DNMT1-201ENST00000340748 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
DNMT1-201ENST00000340748 CHIC2Q9UKJ5 165 aa17.74■□□□□ 0.43
DNMT1-201ENST00000340748 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
DNMT1-201ENST00000340748 MLECQ14165 292 aa17.73■□□□□ 0.43
DNMT1-201ENST00000340748 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
DNMT1-201ENST00000340748 CADPSQ9ULU8 1353 aa17.69■□□□□ 0.42
DNMT1-201ENST00000340748 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
DNMT1-201ENST00000340748 SOGA1O94964 1423 aa17.67■□□□□ 0.42
DNMT1-201ENST00000340748 ACIN1Q9UKV3 1341 aaKnown RBP17.66■□□□□ 0.42
DNMT1-201ENST00000340748 CEP164Q9UPV0 1460 aa17.66■□□□□ 0.42
DNMT1-201ENST00000340748 CUX2O14529 1486 aa17.64■□□□□ 0.42
DNMT1-201ENST00000340748 PLEKHG5O94827 1062 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms