RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
VPS26A-207ENST00000490696 CCDC180Q9P1Z9 1646 aa33.34■■■□□ 2.93
VPS26A-207ENST00000490696 ABCC9O60706 1549 aa32.68■■■□□ 2.82
VPS26A-207ENST00000490696 RB1CC1Q8TDY2 1594 aa31.4■■■□□ 2.62
VPS26A-207ENST00000490696 NACADO15069 1562 aa31.38■■■□□ 2.61
VPS26A-207ENST00000490696 DCAF8L2P0C7V8 631 aa31.32■■■□□ 2.6
VPS26A-207ENST00000490696 ZCCHC6Q5VYS8 1495 aaKnown RBP31.26■■■□□ 2.59
VPS26A-207ENST00000490696 MYO15BQ96JP2 1530 aa31.2■■■□□ 2.59
VPS26A-207ENST00000490696 DCAF1Q9Y4B6 1507 aa31.05■■■□□ 2.56
VPS26A-207ENST00000490696 UNC13AQ9UPW8 1703 aa30.68■■■□□ 2.5
VPS26A-207ENST00000490696 PABPN1Q86U42 306 aaKnown RBP eCLIP30.54■■■□□ 2.48
VPS26A-207ENST00000490696 DNAJC5BQ9UF47 199 aa30.53■■■□□ 2.48
VPS26A-207ENST00000490696 BICRAQ9NZM4 1560 aa30.49■■■□□ 2.47
VPS26A-207ENST00000490696 SCRIBQ14160 1630 aa30.42■■■□□ 2.46
VPS26A-207ENST00000490696 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
VPS26A-207ENST00000490696 EIF4G1Q04637 1599 aaKnown RBP29.68■■■□□ 2.34
VPS26A-207ENST00000490696 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
VPS26A-207ENST00000490696 CECR2Q9BXF3 1484 aa29.37■■■□□ 2.29
VPS26A-207ENST00000490696 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
VPS26A-207ENST00000490696 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
VPS26A-207ENST00000490696 ATAD2BQ9ULI0 1458 aa28.98■■■□□ 2.23
VPS26A-207ENST00000490696 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
VPS26A-207ENST00000490696 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
VPS26A-207ENST00000490696 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
VPS26A-207ENST00000490696 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
VPS26A-207ENST00000490696 HMGXB3Q12766 1538 aa28.81■■■□□ 2.2
VPS26A-207ENST00000490696 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
VPS26A-207ENST00000490696 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
VPS26A-207ENST00000490696 RSF1Q96T23 1441 aaPredicted RBP28.59■■■□□ 2.17
VPS26A-207ENST00000490696 WIZO95785 1651 aa28.58■■■□□ 2.17
VPS26A-207ENST00000490696 DNAJC5Q9H3Z4 198 aa28.57■■■□□ 2.16
VPS26A-207ENST00000490696 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
VPS26A-207ENST00000490696 NESP48681 1621 aa28.28■■■□□ 2.12
VPS26A-207ENST00000490696 LAMC3Q9Y6N6 1575 aa28.18■■■□□ 2.1
VPS26A-207ENST00000490696 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
VPS26A-207ENST00000490696 CADPSQ9ULU8 1353 aa28.12■■■□□ 2.09
VPS26A-207ENST00000490696 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.07
VPS26A-207ENST00000490696 CUX2O14529 1486 aa28■■■□□ 2.07
VPS26A-207ENST00000490696 CCDC88BA6NC98 1476 aa27.97■■■□□ 2.07
VPS26A-207ENST00000490696 CFTRP13569 1480 aa27.95■■■□□ 2.07
VPS26A-207ENST00000490696 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
VPS26A-207ENST00000490696 THOC2Q8NI27 1593 aaKnown RBP27.86■■■□□ 2.05
VPS26A-207ENST00000490696 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
VPS26A-207ENST00000490696 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
VPS26A-207ENST00000490696 CEP164Q9UPV0 1460 aa27.75■■■□□ 2.03
VPS26A-207ENST00000490696 MRC2Q9UBG0 1479 aa27.72■■■□□ 2.03
VPS26A-207ENST00000490696 PRDM2Q13029 1718 aa27.68■■■□□ 2.02
VPS26A-207ENST00000490696 WDR62O43379 1518 aa27.64■■■□□ 2.02
VPS26A-207ENST00000490696 URB2Q14146 1524 aaKnown RBP27.52■■■□□ 2
VPS26A-207ENST00000490696 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
VPS26A-207ENST00000490696 ABCC8Q09428 1581 aa27.32■■□□□ 1.96
VPS26A-207ENST00000490696 DNMBPQ6XZF7 1577 aa27.3■■□□□ 1.96
VPS26A-207ENST00000490696 IFT140Q96RY7 1462 aa27.18■■□□□ 1.94
VPS26A-207ENST00000490696 CUX1P39880 1505 aa27.13■■□□□ 1.93
VPS26A-207ENST00000490696 POLA1P09884 1462 aaPredicted RBP27.12■■□□□ 1.93
VPS26A-207ENST00000490696 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
VPS26A-207ENST00000490696 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
VPS26A-207ENST00000490696 FGD5Q6ZNL6 1462 aa27.04■■□□□ 1.92
VPS26A-207ENST00000490696 TRIM41Q8WV44 630 aa27.01■■□□□ 1.91
VPS26A-207ENST00000490696 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
VPS26A-207ENST00000490696 SOGA1O94964 1423 aa26.99■■□□□ 1.91
VPS26A-207ENST00000490696 EIF4G3O43432 1585 aaKnown RBP26.93■■□□□ 1.9
VPS26A-207ENST00000490696 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
VPS26A-207ENST00000490696 AQRO60306 1485 aaKnown RBP eCLIP26.91■■□□□ 1.9
VPS26A-207ENST00000490696 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
VPS26A-207ENST00000490696 SYNJ1O43426 1573 aa26.87■■□□□ 1.89
VPS26A-207ENST00000490696 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
VPS26A-207ENST00000490696 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
VPS26A-207ENST00000490696 WDR97A6NE52 1622 aa26.81■■□□□ 1.88
VPS26A-207ENST00000490696 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
VPS26A-207ENST00000490696 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
VPS26A-207ENST00000490696 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
VPS26A-207ENST00000490696 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
VPS26A-207ENST00000490696 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
VPS26A-207ENST00000490696 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
VPS26A-207ENST00000490696 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
VPS26A-207ENST00000490696 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
VPS26A-207ENST00000490696 PBRM1Q86U86 1689 aa26.6■■□□□ 1.85
VPS26A-207ENST00000490696 CHD1O14646 1710 aa26.59■■□□□ 1.85
VPS26A-207ENST00000490696 FBLN2P98095 1184 aa26.56■■□□□ 1.84
VPS26A-207ENST00000490696 SYNJ2O15056 1496 aa26.51■■□□□ 1.83
VPS26A-207ENST00000490696 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
VPS26A-207ENST00000490696 ERICH3Q5RHP9 1530 aa26.45■■□□□ 1.83
VPS26A-207ENST00000490696 ADAMTS12P58397 1594 aa26.41■■□□□ 1.82
VPS26A-207ENST00000490696 FHAD1B1AJZ9 1412 aa26.38■■□□□ 1.81
VPS26A-207ENST00000490696 KIF27Q86VH2 1401 aa26.37■■□□□ 1.81
VPS26A-207ENST00000490696 GRIN2AQ12879 1464 aa26.35■■□□□ 1.81
VPS26A-207ENST00000490696 RIMBP3CA6NJZ7 1639 aa26.34■■□□□ 1.81
VPS26A-207ENST00000490696 RIMBP3BA6NNM3 1639 aa26.34■■□□□ 1.81
VPS26A-207ENST00000490696 RIMBP3Q9UFD9 1639 aa26.34■■□□□ 1.81
VPS26A-207ENST00000490696 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
VPS26A-207ENST00000490696 ARHGEF11O15085 1522 aa26.3■■□□□ 1.8
VPS26A-207ENST00000490696 IGF1RP08069 1367 aa26.3■■□□□ 1.8
VPS26A-207ENST00000490696 NUP160Q12769 1436 aa26.25■■□□□ 1.79
VPS26A-207ENST00000490696 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
VPS26A-207ENST00000490696 CUL7Q14999 1698 aa26.18■■□□□ 1.78
VPS26A-207ENST00000490696 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.77
VPS26A-207ENST00000490696 CARMIL1Q5VZK9 1371 aa26.12■■□□□ 1.77
VPS26A-207ENST00000490696 ARAP1Q96P48 1450 aa26.1■■□□□ 1.77
VPS26A-207ENST00000490696 CYB5RLQ6IPT4 315 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 293.6 ms