RNA–Protein interactions for RNA: ENST00000371558.6

UBE2A-202, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2A, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-202ENST00000371558 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.88
UBE2A-202ENST00000371558 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
UBE2A-202ENST00000371558 ZCCHC6Q5VYS8 1495 aaKnown RBP27.73■■■□□ 2.03
UBE2A-202ENST00000371558 ABCC9O60706 1549 aa27.62■■■□□ 2.01
UBE2A-202ENST00000371558 DCAF8L2P0C7V8 631 aa27.48■■□□□ 1.99
UBE2A-202ENST00000371558 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
UBE2A-202ENST00000371558 MYO15BQ96JP2 1530 aa27.02■■□□□ 1.92
UBE2A-202ENST00000371558 NACADO15069 1562 aa26.98■■□□□ 1.91
UBE2A-202ENST00000371558 SHROOM4Q9ULL8 1493 aa26.92■■□□□ 1.9
UBE2A-202ENST00000371558 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
UBE2A-202ENST00000371558 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
UBE2A-202ENST00000371558 UNC13AQ9UPW8 1703 aa26.37■■□□□ 1.81
UBE2A-202ENST00000371558 BICRAQ9NZM4 1560 aa26.04■■□□□ 1.76
UBE2A-202ENST00000371558 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.75
UBE2A-202ENST00000371558 SUPT5HO00267 1087 aaKnown RBP25.77■■□□□ 1.72
UBE2A-202ENST00000371558 CECR2Q9BXF3 1484 aa25.74■■□□□ 1.71
UBE2A-202ENST00000371558 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
UBE2A-202ENST00000371558 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
UBE2A-202ENST00000371558 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
UBE2A-202ENST00000371558 SMARCA4P51532 1647 aa25.49■■□□□ 1.67
UBE2A-202ENST00000371558 WIZO95785 1651 aa25.38■■□□□ 1.65
UBE2A-202ENST00000371558 EIF4G1Q04637 1599 aaKnown RBP25.28■■□□□ 1.64
UBE2A-202ENST00000371558 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.62
UBE2A-202ENST00000371558 ATAD2BQ9ULI0 1458 aa25.1■■□□□ 1.61
UBE2A-202ENST00000371558 SMARCA2P51531 1590 aa25.08■■□□□ 1.61
UBE2A-202ENST00000371558 TOP2AP11388 1531 aaKnown RBP25.06■■□□□ 1.6
UBE2A-202ENST00000371558 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
UBE2A-202ENST00000371558 BAZ1BQ9UIG0 1483 aaKnown RBP24.97■■□□□ 1.59
UBE2A-202ENST00000371558 NCAPD3P42695 1498 aa24.89■■□□□ 1.57
UBE2A-202ENST00000371558 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
UBE2A-202ENST00000371558 CCDC88BA6NC98 1476 aa24.81■■□□□ 1.56
UBE2A-202ENST00000371558 DNAJC5BQ9UF47 199 aa24.54■■□□□ 1.52
UBE2A-202ENST00000371558 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
UBE2A-202ENST00000371558 CFTRP13569 1480 aa24.29■■□□□ 1.48
UBE2A-202ENST00000371558 ABCC8Q09428 1581 aa24.28■■□□□ 1.48
UBE2A-202ENST00000371558 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
UBE2A-202ENST00000371558 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
UBE2A-202ENST00000371558 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
UBE2A-202ENST00000371558 NESP48681 1621 aa24.19■■□□□ 1.46
UBE2A-202ENST00000371558 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
UBE2A-202ENST00000371558 WRNQ14191 1432 aaPredicted RBP eCLIP24.08■■□□□ 1.45
UBE2A-202ENST00000371558 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
UBE2A-202ENST00000371558 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
UBE2A-202ENST00000371558 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
UBE2A-202ENST00000371558 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
UBE2A-202ENST00000371558 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
UBE2A-202ENST00000371558 CUX1P39880 1505 aa23.92■■□□□ 1.42
UBE2A-202ENST00000371558 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
UBE2A-202ENST00000371558 CEP164Q9UPV0 1460 aa23.89■■□□□ 1.42
UBE2A-202ENST00000371558 FAM9AQ8IZU1 332 aaPredicted RBP23.82■■□□□ 1.4
UBE2A-202ENST00000371558 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
UBE2A-202ENST00000371558 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
UBE2A-202ENST00000371558 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
UBE2A-202ENST00000371558 SOGA1O94964 1423 aa23.73■■□□□ 1.39
UBE2A-202ENST00000371558 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
UBE2A-202ENST00000371558 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
UBE2A-202ENST00000371558 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
UBE2A-202ENST00000371558 MRC2Q9UBG0 1479 aa23.65■■□□□ 1.38
UBE2A-202ENST00000371558 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
UBE2A-202ENST00000371558 LOC105371045A0A1W2PR82 267 aa23.6■■□□□ 1.37
UBE2A-202ENST00000371558 EEA1Q15075 1411 aa23.57■■□□□ 1.36
UBE2A-202ENST00000371558 EHMT2Q96KQ7 1210 aa23.56■■□□□ 1.36
UBE2A-202ENST00000371558 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
UBE2A-202ENST00000371558 THOC2Q8NI27 1593 aaKnown RBP23.54■■□□□ 1.36
UBE2A-202ENST00000371558 WDR62O43379 1518 aa23.53■■□□□ 1.36
UBE2A-202ENST00000371558 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
UBE2A-202ENST00000371558 CUX2O14529 1486 aa23.5■■□□□ 1.35
UBE2A-202ENST00000371558 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
UBE2A-202ENST00000371558 ABCA10Q8WWZ4 1543 aa23.45■■□□□ 1.34
UBE2A-202ENST00000371558 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
UBE2A-202ENST00000371558 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
UBE2A-202ENST00000371558 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
UBE2A-202ENST00000371558 KIF21BO75037 1637 aa23.33■■□□□ 1.32
UBE2A-202ENST00000371558 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
UBE2A-202ENST00000371558 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
UBE2A-202ENST00000371558 GOLGA3Q08378 1498 aa23.29■■□□□ 1.32
UBE2A-202ENST00000371558 IGF1RP08069 1367 aa23.29■■□□□ 1.32
UBE2A-202ENST00000371558 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
UBE2A-202ENST00000371558 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
UBE2A-202ENST00000371558 PRXQ9BXM0 1461 aa23.25■■□□□ 1.31
UBE2A-202ENST00000371558 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
UBE2A-202ENST00000371558 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.317e-8■■■■□ 22.6
UBE2A-202ENST00000371558 UBTFP17480 764 aaKnown RBP23.23■■□□□ 1.31
UBE2A-202ENST00000371558 PBRM1Q86U86 1689 aa23.2■■□□□ 1.31
UBE2A-202ENST00000371558 ERICH3Q5RHP9 1530 aa23.2■■□□□ 1.3
UBE2A-202ENST00000371558 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
UBE2A-202ENST00000371558 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
UBE2A-202ENST00000371558 CUL7Q14999 1698 aa23.16■■□□□ 1.3
UBE2A-202ENST00000371558 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.3
UBE2A-202ENST00000371558 GRIN2BQ13224 1484 aa23.1■■□□□ 1.29
UBE2A-202ENST00000371558 CEP162Q5TB80 1403 aa23.04■■□□□ 1.28
UBE2A-202ENST00000371558 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
UBE2A-202ENST00000371558 SNAPC4Q5SXM2 1469 aa23.01■■□□□ 1.27
UBE2A-202ENST00000371558 RANGAP1P46060 587 aaPredicted RBP23■■□□□ 1.27
UBE2A-202ENST00000371558 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
UBE2A-202ENST00000371558 CTTNBP2Q8WZ74 1663 aa22.92■■□□□ 1.26
UBE2A-202ENST00000371558 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
UBE2A-202ENST00000371558 CLIP1P30622 1438 aa22.91■■□□□ 1.26
UBE2A-202ENST00000371558 SYNJ2O15056 1496 aa22.84■■□□□ 1.25
UBE2A-202ENST00000371558 FBLN2P98095 1184 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms