RNA–Protein interactions for RNA: ENST00000579198.5

NARF-213, Transcript of nuclear prelamin A recognition factor, human

TSL 5

Gene NARF, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-213	ENST00000579198	NISCH	Q9Y2I1	1504 aa		39.77	■■■■□ 3.96
NARF-213	ENST00000579198	CCDC180	Q9P1Z9	1646 aa		35.6	■■■■□ 3.29
NARF-213	ENST00000579198	ABCC9	O60706	1549 aa		35.36	■■■■□ 3.25
NARF-213	ENST00000579198	RB1CC1	Q8TDY2	1594 aa		33.78	■■■■□ 3
NARF-213	ENST00000579198	NACAD	O15069	1562 aa		33.61	■■■□□ 2.97
NARF-213	ENST00000579198	DCAF8L2	P0C7V8	631 aa		33.55	■■■□□ 2.96
NARF-213	ENST00000579198	MYO15B	Q96JP2	1530 aa		33.22	■■■□□ 2.91
NARF-213	ENST00000579198	UNC13A	Q9UPW8	1703 aa		32.99	■■■□□ 2.87
NARF-213	ENST00000579198	ZCCHC6	Q5VYS8	1495 aa	Known RBP	32.99	■■■□□ 2.87
NARF-213	ENST00000579198	PABPN1	Q86U42	306 aa	Known RBP eCLIP	32.97	■■■□□ 2.87
NARF-213	ENST00000579198	DNAJC5B	Q9UF47	199 aa		32.93	■■■□□ 2.86
NARF-213	ENST00000579198	DCAF1	Q9Y4B6	1507 aa		32.87	■■■□□ 2.85
NARF-213	ENST00000579198	BICRA	Q9NZM4	1560 aa		32.74	■■■□□ 2.83
NARF-213	ENST00000579198	SCRIB	Q14160	1630 aa		32.43	■■■□□ 2.78
NARF-213	ENST00000579198	SHROOM4	Q9ULL8	1493 aa		32.36	■■■□□ 2.77
NARF-213	ENST00000579198	CC2D2A	Q9P2K1	1620 aa		31.95	■■■□□ 2.71
NARF-213	ENST00000579198	EIF4G1	Q04637	1599 aa	Known RBP	31.94	■■■□□ 2.7
NARF-213	ENST00000579198	CECR2	Q9BXF3	1484 aa		31.83	■■■□□ 2.69
NARF-213	ENST00000579198	NCAPD3	P42695	1498 aa		31.01	■■■□□ 2.56
NARF-213	ENST00000579198	SMARCA4	P51532	1647 aa		30.97	■■■□□ 2.55
NARF-213	ENST00000579198	ATAD2B	Q9ULI0	1458 aa		30.95	■■■□□ 2.54
NARF-213	ENST00000579198	SMARCA2	P51531	1590 aa		30.9	■■■□□ 2.54
NARF-213	ENST00000579198	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.88	■■■□□ 2.53
NARF-213	ENST00000579198	HMGXB3	Q12766	1538 aa		30.79	■■■□□ 2.52
NARF-213	ENST00000579198	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.68	■■■□□ 2.5
NARF-213	ENST00000579198	PEG3	Q9GZU2	1588 aa		30.66	■■■□□ 2.5
NARF-213	ENST00000579198	MROH2B	Q7Z745	1585 aa		30.63	■■■□□ 2.49
NARF-213	ENST00000579198	ERCC6	Q03468	1493 aa		30.54	■■■□□ 2.48
NARF-213	ENST00000579198	NES	P48681	1621 aa		30.42	■■■□□ 2.46
NARF-213	ENST00000579198	CUX2	O14529	1486 aa		30.39	■■■□□ 2.46
NARF-213	ENST00000579198	LAMC3	Q9Y6N6	1575 aa		30.29	■■■□□ 2.44
NARF-213	ENST00000579198	WIZ	O95785	1651 aa		30.29	■■■□□ 2.44
NARF-213	ENST00000579198	PDS5B	Q9NTI5	1447 aa		30.13	■■■□□ 2.41
NARF-213	ENST00000579198	DNAJC5	Q9H3Z4	198 aa		30.11	■■■□□ 2.41
NARF-213	ENST00000579198	CADPS	Q9ULU8	1353 aa		30.1	■■■□□ 2.41
NARF-213	ENST00000579198	RSF1	Q96T23	1441 aa	Predicted RBP	30.1	■■■□□ 2.41
NARF-213	ENST00000579198	KIF21A	Q7Z4S6	1674 aa		30.05	■■■□□ 2.4
NARF-213	ENST00000579198	THOC2	Q8NI27	1593 aa	Known RBP	30.05	■■■□□ 2.4
NARF-213	ENST00000579198	TOP2A	P11388	1531 aa	Known RBP	29.93	■■■□□ 2.38
NARF-213	ENST00000579198	MRC2	Q9UBG0	1479 aa		29.82	■■■□□ 2.36
NARF-213	ENST00000579198	CFTR	P13569	1480 aa		29.79	■■■□□ 2.36
NARF-213	ENST00000579198	CEP164	Q9UPV0	1460 aa		29.76	■■■□□ 2.35
NARF-213	ENST00000579198	FANCD2	Q9BXW9	1451 aa		29.74	■■■□□ 2.35
NARF-213	ENST00000579198	WDR62	O43379	1518 aa		29.72	■■■□□ 2.35
NARF-213	ENST00000579198	CCDC88B	A6NC98	1476 aa		29.59	■■■□□ 2.33
NARF-213	ENST00000579198	PRDM2	Q13029	1718 aa		29.53	■■■□□ 2.32
NARF-213	ENST00000579198	URB2	Q14146	1524 aa	Known RBP	29.45	■■■□□ 2.31
NARF-213	ENST00000579198	ABCC8	Q09428	1581 aa		29.21	■■■□□ 2.27
NARF-213	ENST00000579198	TOPBP1	Q92547	1522 aa		29.2	■■■□□ 2.27
NARF-213	ENST00000579198	IFT140	Q96RY7	1462 aa		29.16	■■■□□ 2.26
NARF-213	ENST00000579198	DNMBP	Q6XZF7	1577 aa		29.12	■■■□□ 2.25
NARF-213	ENST00000579198	OSCAR	Q8IYS5	282 aa		29.09	■■■□□ 2.25
NARF-213	ENST00000579198	ZNF608	Q9ULD9	1512 aa	Predicted RBP	29.05	■■■□□ 2.24
NARF-213	ENST00000579198	SUPT5H	O00267	1087 aa	Known RBP	29.01	■■■□□ 2.23
NARF-213	ENST00000579198	POLA1	P09884	1462 aa	Predicted RBP	28.91	■■■□□ 2.22
NARF-213	ENST00000579198	TRIM41	Q8WV44	630 aa		28.91	■■■□□ 2.22
NARF-213	ENST00000579198	EIF4G3	O43432	1585 aa	Known RBP	28.91	■■■□□ 2.22
NARF-213	ENST00000579198	TARBP1	Q13395	1621 aa	Known RBP	28.91	■■■□□ 2.22
NARF-213	ENST00000579198	AQR	O60306	1485 aa	Known RBP eCLIP	28.85	■■■□□ 2.21	4e-11	■■■■□ 22.9
NARF-213	ENST00000579198	SOGA1	O94964	1423 aa		28.82	■■■□□ 2.2
NARF-213	ENST00000579198	RAD54L2	Q9Y4B4	1467 aa		28.8	■■■□□ 2.2
NARF-213	ENST00000579198	FGD5	Q6ZNL6	1462 aa		28.78	■■■□□ 2.2
NARF-213	ENST00000579198	CUX1	P39880	1505 aa		28.77	■■■□□ 2.2
NARF-213	ENST00000579198	TDRD9	Q8NDG6	1382 aa	Known RBP	28.72	■■■□□ 2.19
NARF-213	ENST00000579198	WDR97	A6NE52	1622 aa		28.67	■■■□□ 2.18
NARF-213	ENST00000579198	CHD1	O14646	1710 aa		28.66	■■■□□ 2.18
NARF-213	ENST00000579198	FBLN2	P98095	1184 aa		28.66	■■■□□ 2.18
NARF-213	ENST00000579198	RIMBP3C	A6NJZ7	1639 aa		28.61	■■■□□ 2.17
NARF-213	ENST00000579198	RIMBP3B	A6NNM3	1639 aa		28.61	■■■□□ 2.17
NARF-213	ENST00000579198	RIMBP3	Q9UFD9	1639 aa		28.61	■■■□□ 2.17
NARF-213	ENST00000579198	ARHGEF11	O15085	1522 aa		28.56	■■■□□ 2.16
NARF-213	ENST00000579198	SNAPC4	Q5SXM2	1469 aa		28.55	■■■□□ 2.16
NARF-213	ENST00000579198	GRIN2B	Q13224	1484 aa		28.53	■■■□□ 2.16
NARF-213	ENST00000579198	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.51	■■■□□ 2.15
NARF-213	ENST00000579198	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.5	■■■□□ 2.15
NARF-213	ENST00000579198	GAPVD1	Q14C86	1478 aa		28.46	■■■□□ 2.15
NARF-213	ENST00000579198	ABCA10	Q8WWZ4	1543 aa		28.46	■■■□□ 2.15
NARF-213	ENST00000579198	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.43	■■■□□ 2.14	3e-6	■□□□□ 10.3
NARF-213	ENST00000579198	PBRM1	Q86U86	1689 aa		28.42	■■■□□ 2.14
NARF-213	ENST00000579198	SYNJ2	O15056	1496 aa		28.4	■■■□□ 2.14
NARF-213	ENST00000579198	TOP2B	Q02880	1626 aa		28.39	■■■□□ 2.13
NARF-213	ENST00000579198	BIVM-ERCC5	R4GMW8	1640 aa		28.39	■■■□□ 2.13
NARF-213	ENST00000579198	CYB5RL	Q6IPT4	315 aa		28.38	■■■□□ 2.13
NARF-213	ENST00000579198	ABCA5	Q8WWZ7	1642 aa		28.38	■■■□□ 2.13
NARF-213	ENST00000579198	SYNJ1	O43426	1573 aa		28.37	■■■□□ 2.13
NARF-213	ENST00000579198	CLASP1	Q7Z460	1538 aa		28.32	■■■□□ 2.12
NARF-213	ENST00000579198	ARAP1	Q96P48	1450 aa		28.27	■■■□□ 2.12
NARF-213	ENST00000579198	GRIN2A	Q12879	1464 aa		28.15	■■■□□ 2.1
NARF-213	ENST00000579198	ADAMTS12	P58397	1594 aa		28.15	■■■□□ 2.1
NARF-213	ENST00000579198	FHAD1	B1AJZ9	1412 aa		28.12	■■■□□ 2.09
NARF-213	ENST00000579198	ERICH3	Q5RHP9	1530 aa		28.12	■■■□□ 2.09
NARF-213	ENST00000579198	NUP160	Q12769	1436 aa		28.04	■■■□□ 2.08
NARF-213	ENST00000579198	CEP170	Q5SW79	1584 aa		28.02	■■■□□ 2.08
NARF-213	ENST00000579198	TRH	P20396	242 aa	Predicted RBP	28.01	■■■□□ 2.07
NARF-213	ENST00000579198	SHROOM2	Q13796	1616 aa		27.89	■■■□□ 2.05
NARF-213	ENST00000579198	ERCC6L2	Q5T890	1561 aa		27.88	■■■□□ 2.05
NARF-213	ENST00000579198	KIF27	Q86VH2	1401 aa		27.88	■■■□□ 2.05
NARF-213	ENST00000579198	IGF1R	P08069	1367 aa		27.82	■■■□□ 2.04
NARF-213	ENST00000579198	JPH4	Q96JJ6	628 aa		27.81	■■■□□ 2.04
NARF-213	ENST00000579198	PRG4	Q92954	1404 aa	Predicted RBP	27.77	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms