RNA–Protein interactions for RNA: ENST00000483020.5

TSC2-213, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-213ENST00000483020 NISCHQ9Y2I1 1504 aa33.25■■■□□ 2.91
TSC2-213ENST00000483020 ABCC9O60706 1549 aa30.41■■■□□ 2.46
TSC2-213ENST00000483020 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.4
TSC2-213ENST00000483020 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
TSC2-213ENST00000483020 RB1CC1Q8TDY2 1594 aa28.78■■■□□ 2.2
TSC2-213ENST00000483020 NACADO15069 1562 aa28.47■■■□□ 2.15
TSC2-213ENST00000483020 UNC13AQ9UPW8 1703 aa28.24■■■□□ 2.11
TSC2-213ENST00000483020 PABPN1Q86U42 306 aaKnown RBP eCLIP28.2■■■□□ 2.1
TSC2-213ENST00000483020 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
TSC2-213ENST00000483020 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
TSC2-213ENST00000483020 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
TSC2-213ENST00000483020 SHROOM4Q9ULL8 1493 aa27.53■■■□□ 2
TSC2-213ENST00000483020 ZCCHC6Q5VYS8 1495 aaKnown RBP27.5■■□□□ 1.99
TSC2-213ENST00000483020 CC2D2AQ9P2K1 1620 aa27.49■■□□□ 1.99
TSC2-213ENST00000483020 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
TSC2-213ENST00000483020 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
TSC2-213ENST00000483020 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
TSC2-213ENST00000483020 EIF4G1Q04637 1599 aaKnown RBP27.32■■□□□ 1.96
TSC2-213ENST00000483020 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
TSC2-213ENST00000483020 CUX2O14529 1486 aa26.37■■□□□ 1.81
TSC2-213ENST00000483020 ERCC6Q03468 1493 aa26.28■■□□□ 1.8
TSC2-213ENST00000483020 NCAPD3P42695 1498 aa26.26■■□□□ 1.79
TSC2-213ENST00000483020 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
TSC2-213ENST00000483020 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
TSC2-213ENST00000483020 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
TSC2-213ENST00000483020 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
TSC2-213ENST00000483020 NESP48681 1621 aa26.03■■□□□ 1.76
TSC2-213ENST00000483020 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
TSC2-213ENST00000483020 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
TSC2-213ENST00000483020 BAZ1AQ9NRL2 1556 aaPredicted RBP25.84■■□□□ 1.73
TSC2-213ENST00000483020 PEG3Q9GZU2 1588 aa25.8■■□□□ 1.72
TSC2-213ENST00000483020 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
TSC2-213ENST00000483020 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
TSC2-213ENST00000483020 MROH2BQ7Z745 1585 aa25.63■■□□□ 1.69
TSC2-213ENST00000483020 PDS5BQ9NTI5 1447 aa25.58■■□□□ 1.69
TSC2-213ENST00000483020 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
TSC2-213ENST00000483020 TRIM41Q8WV44 630 aa25.43■■□□□ 1.66
TSC2-213ENST00000483020 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
TSC2-213ENST00000483020 WDR62O43379 1518 aa25.41■■□□□ 1.66
TSC2-213ENST00000483020 WIZO95785 1651 aa25.34■■□□□ 1.65
TSC2-213ENST00000483020 CEP164Q9UPV0 1460 aa25.25■■□□□ 1.63
TSC2-213ENST00000483020 FANCD2Q9BXW9 1451 aa25.18■■□□□ 1.62
TSC2-213ENST00000483020 CFTRP13569 1480 aa25.09■■□□□ 1.61
TSC2-213ENST00000483020 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
TSC2-213ENST00000483020 OSCARQ8IYS5 282 aa25.02■■□□□ 1.6
TSC2-213ENST00000483020 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
TSC2-213ENST00000483020 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
TSC2-213ENST00000483020 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
TSC2-213ENST00000483020 RIMBP3CA6NJZ7 1639 aa24.87■■□□□ 1.57
TSC2-213ENST00000483020 RIMBP3BA6NNM3 1639 aa24.87■■□□□ 1.57
TSC2-213ENST00000483020 RIMBP3Q9UFD9 1639 aa24.87■■□□□ 1.57
TSC2-213ENST00000483020 ZNF608Q9ULD9 1512 aaPredicted RBP24.77■■□□□ 1.56
TSC2-213ENST00000483020 IFT140Q96RY7 1462 aa24.75■■□□□ 1.55
TSC2-213ENST00000483020 ARHGEF11O15085 1522 aa24.72■■□□□ 1.55
TSC2-213ENST00000483020 TOPBP1Q92547 1522 aa24.67■■□□□ 1.54
TSC2-213ENST00000483020 EIF4G3O43432 1585 aaKnown RBP24.66■■□□□ 1.54
TSC2-213ENST00000483020 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
TSC2-213ENST00000483020 CHD1O14646 1710 aa24.58■■□□□ 1.53
TSC2-213ENST00000483020 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
TSC2-213ENST00000483020 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
TSC2-213ENST00000483020 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
TSC2-213ENST00000483020 CYB5RLQ6IPT4 315 aa24.48■■□□□ 1.51
TSC2-213ENST00000483020 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.512e-6■■■■□ 23.1
TSC2-213ENST00000483020 ARAP1Q96P48 1450 aa24.45■■□□□ 1.51
TSC2-213ENST00000483020 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.5
TSC2-213ENST00000483020 FBLN2P98095 1184 aa24.34■■□□□ 1.49
TSC2-213ENST00000483020 TRHP20396 242 aaPredicted RBP24.33■■□□□ 1.49
TSC2-213ENST00000483020 RAD54L2Q9Y4B4 1467 aa24.31■■□□□ 1.48
TSC2-213ENST00000483020 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
TSC2-213ENST00000483020 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
TSC2-213ENST00000483020 SNAPC4Q5SXM2 1469 aa24.24■■□□□ 1.47
TSC2-213ENST00000483020 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
TSC2-213ENST00000483020 SOGA1O94964 1423 aa24.22■■□□□ 1.47
TSC2-213ENST00000483020 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
TSC2-213ENST00000483020 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
TSC2-213ENST00000483020 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
TSC2-213ENST00000483020 CUX1P39880 1505 aa24.11■■□□□ 1.45
TSC2-213ENST00000483020 GRIN2BQ13224 1484 aa24.08■■□□□ 1.45
TSC2-213ENST00000483020 CHMP7Q8WUX9 453 aaPredicted RBP24.08■■□□□ 1.45
TSC2-213ENST00000483020 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
TSC2-213ENST00000483020 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
TSC2-213ENST00000483020 GAPVD1Q14C86 1478 aa23.97■■□□□ 1.43
TSC2-213ENST00000483020 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
TSC2-213ENST00000483020 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
TSC2-213ENST00000483020 ABCA10Q8WWZ4 1543 aa23.88■■□□□ 1.41
TSC2-213ENST00000483020 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
TSC2-213ENST00000483020 GRIN2AQ12879 1464 aa23.8■■□□□ 1.4
TSC2-213ENST00000483020 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
TSC2-213ENST00000483020 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
TSC2-213ENST00000483020 CEP170Q5SW79 1584 aa23.77■■□□□ 1.4
TSC2-213ENST00000483020 NUP160Q12769 1436 aa23.73■■□□□ 1.39
TSC2-213ENST00000483020 SHROOM2Q13796 1616 aa23.72■■□□□ 1.39
TSC2-213ENST00000483020 KIF13AQ9H1H9 1805 aa23.67■■□□□ 1.38
TSC2-213ENST00000483020 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
TSC2-213ENST00000483020 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
TSC2-213ENST00000483020 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
TSC2-213ENST00000483020 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
TSC2-213ENST00000483020 ERICH3Q5RHP9 1530 aa23.57■■□□□ 1.36
TSC2-213ENST00000483020 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
TSC2-213ENST00000483020 RUSC2Q8N2Y8 1516 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms