RNA–Protein interactions for RNA: ENST00000625379.1

UBE2A-205, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 3

Gene UBE2A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-205ENST00000625379 NISCHQ9Y2I1 1504 aa59.93■■■■■ 7.18
UBE2A-205ENST00000625379 CCDC180Q9P1Z9 1646 aa53.66■■■■■ 6.18
UBE2A-205ENST00000625379 ABCC9O60706 1549 aa53.5■■■■■ 6.15
UBE2A-205ENST00000625379 RB1CC1Q8TDY2 1594 aa50.96■■■■■ 5.75
UBE2A-205ENST00000625379 NACADO15069 1562 aa50.64■■■■■ 5.7
UBE2A-205ENST00000625379 DCAF8L2P0C7V8 631 aa50.49■■■■■ 5.67
UBE2A-205ENST00000625379 MYO15BQ96JP2 1530 aa49.98■■■■■ 5.59
UBE2A-205ENST00000625379 DNAJC5BQ9UF47 199 aa49.94■■■■■ 5.59
UBE2A-205ENST00000625379 UNC13AQ9UPW8 1703 aa49.86■■■■■ 5.57
UBE2A-205ENST00000625379 PABPN1Q86U42 306 aaKnown RBP eCLIP49.84■■■■■ 5.57
UBE2A-205ENST00000625379 ZCCHC6Q5VYS8 1495 aaKnown RBP49.74■■■■■ 5.55
UBE2A-205ENST00000625379 BICRAQ9NZM4 1560 aa49.52■■■■■ 5.52
UBE2A-205ENST00000625379 DCAF1Q9Y4B6 1507 aa49.45■■■■■ 5.51
UBE2A-205ENST00000625379 SCRIBQ14160 1630 aa49.01■■■■■ 5.44
UBE2A-205ENST00000625379 SHROOM4Q9ULL8 1493 aa48.77■■■■■ 5.4
UBE2A-205ENST00000625379 CC2D2AQ9P2K1 1620 aa48.31■■■■■ 5.32
UBE2A-205ENST00000625379 EIF4G1Q04637 1599 aaKnown RBP48.26■■■■■ 5.32
UBE2A-205ENST00000625379 CECR2Q9BXF3 1484 aa48.13■■■■■ 5.3
UBE2A-205ENST00000625379 NCAPD3P42695 1498 aa46.75■■■■■ 5.07
UBE2A-205ENST00000625379 SMARCA4P51532 1647 aa46.72■■■■■ 5.07
UBE2A-205ENST00000625379 ATAD2BQ9ULI0 1458 aa46.68■■■■■ 5.06
UBE2A-205ENST00000625379 SMARCA2P51531 1590 aa46.54■■■■■ 5.04
UBE2A-205ENST00000625379 BAZ1AQ9NRL2 1556 aaPredicted RBP46.49■■■■■ 5.03
UBE2A-205ENST00000625379 HMGXB3Q12766 1538 aa46.45■■■■■ 5.03
UBE2A-205ENST00000625379 BAZ1BQ9UIG0 1483 aaKnown RBP46.25■■■■■ 5
UBE2A-205ENST00000625379 MROH2BQ7Z745 1585 aa46.22■■■■■ 4.99
UBE2A-205ENST00000625379 PEG3Q9GZU2 1588 aa46.22■■■■■ 4.99
UBE2A-205ENST00000625379 ERCC6Q03468 1493 aa46.14■■■■■ 4.98
UBE2A-205ENST00000625379 NESP48681 1621 aa46.04■■■■■ 4.96
UBE2A-205ENST00000625379 CUX2O14529 1486 aa45.92■■■■■ 4.94
UBE2A-205ENST00000625379 WIZO95785 1651 aa45.69■■■■■ 4.91
UBE2A-205ENST00000625379 LAMC3Q9Y6N6 1575 aa45.67■■■■■ 4.9
UBE2A-205ENST00000625379 DNAJC5Q9H3Z4 198 aa45.6■■■■■ 4.89
UBE2A-205ENST00000625379 THOC2Q8NI27 1593 aaKnown RBP45.51■■■■■ 4.88
UBE2A-205ENST00000625379 KIF21AQ7Z4S6 1674 aa45.45■■■■■ 4.87
UBE2A-205ENST00000625379 PDS5BQ9NTI5 1447 aa45.38■■■■■ 4.86
UBE2A-205ENST00000625379 CADPSQ9ULU8 1353 aa45.34■■■■■ 4.85
UBE2A-205ENST00000625379 RSF1Q96T23 1441 aaPredicted RBP45.33■■■■■ 4.85
UBE2A-205ENST00000625379 TOP2AP11388 1531 aaKnown RBP45.11■■■■■ 4.81
UBE2A-205ENST00000625379 MRC2Q9UBG0 1479 aa45.03■■■■■ 4.8
UBE2A-205ENST00000625379 WDR62O43379 1518 aa44.91■■■■■ 4.78
UBE2A-205ENST00000625379 CFTRP13569 1480 aa44.9■■■■■ 4.78
UBE2A-205ENST00000625379 CEP164Q9UPV0 1460 aa44.9■■■■■ 4.78
UBE2A-205ENST00000625379 FANCD2Q9BXW9 1451 aa44.88■■■■■ 4.78
UBE2A-205ENST00000625379 CCDC88BA6NC98 1476 aa44.59■■■■■ 4.73
UBE2A-205ENST00000625379 URB2Q14146 1524 aaKnown RBP44.52■■■■■ 4.72
UBE2A-205ENST00000625379 PRDM2Q13029 1718 aa44.49■■■■■ 4.71
UBE2A-205ENST00000625379 TOPBP1Q92547 1522 aa44.06■■■■■ 4.64
UBE2A-205ENST00000625379 IFT140Q96RY7 1462 aa43.96■■■■■ 4.63
UBE2A-205ENST00000625379 ZNF608Q9ULD9 1512 aaPredicted RBP43.94■■■■■ 4.63
UBE2A-205ENST00000625379 DNMBPQ6XZF7 1577 aa43.92■■■■■ 4.62
UBE2A-205ENST00000625379 ABCC8Q09428 1581 aa43.88■■■■■ 4.62
UBE2A-205ENST00000625379 OSCARQ8IYS5 282 aa43.83■■■■■ 4.61
UBE2A-205ENST00000625379 TRIM41Q8WV44 630 aa43.8■■■■■ 4.6
UBE2A-205ENST00000625379 EIF4G3O43432 1585 aaKnown RBP43.72■■■■■ 4.59
UBE2A-205ENST00000625379 TARBP1Q13395 1621 aaKnown RBP43.66■■■■■ 4.58
UBE2A-205ENST00000625379 POLA1P09884 1462 aaPredicted RBP43.64■■■■■ 4.58
UBE2A-205ENST00000625379 AQRO60306 1485 aaKnown RBP eCLIP43.56■■■■■ 4.567e-8■■■■□ 22.6
UBE2A-205ENST00000625379 SUPT5HO00267 1087 aaKnown RBP43.53■■■■■ 4.56
UBE2A-205ENST00000625379 RAD54L2Q9Y4B4 1467 aa43.5■■■■■ 4.55
UBE2A-205ENST00000625379 CUX1P39880 1505 aa43.42■■■■■ 4.54
UBE2A-205ENST00000625379 SOGA1O94964 1423 aa43.4■■■■■ 4.54
UBE2A-205ENST00000625379 FGD5Q6ZNL6 1462 aa43.4■■■■■ 4.54
UBE2A-205ENST00000625379 CHD1O14646 1710 aa43.34■■■■■ 4.53
UBE2A-205ENST00000625379 RIMBP3CA6NJZ7 1639 aa43.34■■■■■ 4.53
UBE2A-205ENST00000625379 RIMBP3BA6NNM3 1639 aa43.34■■■■■ 4.53
UBE2A-205ENST00000625379 RIMBP3Q9UFD9 1639 aa43.34■■■■■ 4.53
UBE2A-205ENST00000625379 TDRD9Q8NDG6 1382 aaKnown RBP43.33■■■■■ 4.53
UBE2A-205ENST00000625379 ARHGEF11O15085 1522 aa43.22■■■■■ 4.51
UBE2A-205ENST00000625379 FBLN2P98095 1184 aa43.21■■■■■ 4.51
UBE2A-205ENST00000625379 WDR97A6NE52 1622 aa43.15■■■■■ 4.5
UBE2A-205ENST00000625379 SNAPC4Q5SXM2 1469 aa43.13■■■■■ 4.5
UBE2A-205ENST00000625379 GRIN2BQ13224 1484 aa43■■■■■ 4.47
UBE2A-205ENST00000625379 MAGI1Q96QZ7 1491 aaPredicted RBP42.97■■■■■ 4.47
UBE2A-205ENST00000625379 PBRM1Q86U86 1689 aa42.9■■■■■ 4.46
UBE2A-205ENST00000625379 GAPVD1Q14C86 1478 aa42.89■■■■■ 4.46
UBE2A-205ENST00000625379 CHMP7Q8WUX9 453 aaPredicted RBP42.89■■■■■ 4.46
UBE2A-205ENST00000625379 ABCA10Q8WWZ4 1543 aa42.88■■■■■ 4.46
UBE2A-205ENST00000625379 CYB5RLQ6IPT4 315 aa42.85■■■■■ 4.45
UBE2A-205ENST00000625379 ABCA5Q8WWZ7 1642 aa42.85■■■■■ 4.45
UBE2A-205ENST00000625379 SYNJ2O15056 1496 aa42.84■■■■■ 4.45
UBE2A-205ENST00000625379 CLASP1Q7Z460 1538 aa42.82■■■■■ 4.45
UBE2A-205ENST00000625379 ARAP1Q96P48 1450 aa42.82■■■■■ 4.45
UBE2A-205ENST00000625379 SYNJ1O43426 1573 aa42.79■■■■■ 4.44
UBE2A-205ENST00000625379 TOP2BQ02880 1626 aa42.76■■■■■ 4.44
UBE2A-205ENST00000625379 BIVM-ERCC5R4GMW8 1640 aa42.76■■■■■ 4.44
UBE2A-205ENST00000625379 WRNQ14191 1432 aaPredicted RBP eCLIP42.75■■■■■ 4.43
UBE2A-205ENST00000625379 ADAMTS12P58397 1594 aa42.52■■■■■ 4.4
UBE2A-205ENST00000625379 GRIN2AQ12879 1464 aa42.47■■■■■ 4.39
UBE2A-205ENST00000625379 CEP170Q5SW79 1584 aa42.35■■■■■ 4.37
UBE2A-205ENST00000625379 FHAD1B1AJZ9 1412 aa42.34■■■■■ 4.37
UBE2A-205ENST00000625379 ERICH3Q5RHP9 1530 aa42.34■■■■■ 4.37
UBE2A-205ENST00000625379 TRHP20396 242 aaPredicted RBP42.3■■■■■ 4.36
UBE2A-205ENST00000625379 NUP160Q12769 1436 aa42.29■■■■■ 4.36
UBE2A-205ENST00000625379 ERCC6L2Q5T890 1561 aa42.24■■■■■ 4.35
UBE2A-205ENST00000625379 SHROOM2Q13796 1616 aa42.1■■■■■ 4.33
UBE2A-205ENST00000625379 RUSC2Q8N2Y8 1516 aa41.92■■■■■ 4.3
UBE2A-205ENST00000625379 KIF27Q86VH2 1401 aa41.9■■■■■ 4.3
UBE2A-205ENST00000625379 PRG4Q92954 1404 aaPredicted RBP41.89■■■■■ 4.3
UBE2A-205ENST00000625379 IGF1RP08069 1367 aa41.86■■■■■ 4.29
Retrieved 100 of 20,778 RNA–protein pairs in 234.1 ms