RNA–Protein interactions for RNA: ENST00000581795.5

NARF-218, Transcript of nuclear prelamin A recognition factor, human

TSL 2

Gene NARF, Length 1,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-218	ENST00000581795	NISCH	Q9Y2I1	1504 aa		40.97	■■■■■ 4.15
NARF-218	ENST00000581795	CCDC180	Q9P1Z9	1646 aa		36.54	■■■■□ 3.44
NARF-218	ENST00000581795	ABCC9	O60706	1549 aa		36.4	■■■■□ 3.42
NARF-218	ENST00000581795	RB1CC1	Q8TDY2	1594 aa		34.69	■■■■□ 3.14
NARF-218	ENST00000581795	DCAF8L2	P0C7V8	631 aa		34.55	■■■■□ 3.12
NARF-218	ENST00000581795	NACAD	O15069	1562 aa		34.54	■■■■□ 3.12
NARF-218	ENST00000581795	MYO15B	Q96JP2	1530 aa		34.17	■■■■□ 3.06
NARF-218	ENST00000581795	DNAJC5B	Q9UF47	199 aa		34.04	■■■■□ 3.04
NARF-218	ENST00000581795	PABPN1	Q86U42	306 aa	Known RBP eCLIP	34.01	■■■■□ 3.03
NARF-218	ENST00000581795	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.98	■■■■□ 3.03
NARF-218	ENST00000581795	UNC13A	Q9UPW8	1703 aa		33.9	■■■■□ 3.02
NARF-218	ENST00000581795	DCAF1	Q9Y4B6	1507 aa		33.83	■■■■□ 3.01
NARF-218	ENST00000581795	BICRA	Q9NZM4	1560 aa		33.73	■■■□□ 2.99
NARF-218	ENST00000581795	SCRIB	Q14160	1630 aa		33.36	■■■□□ 2.93
NARF-218	ENST00000581795	SHROOM4	Q9ULL8	1493 aa		33.23	■■■□□ 2.91
NARF-218	ENST00000581795	CC2D2A	Q9P2K1	1620 aa		32.86	■■■□□ 2.85
NARF-218	ENST00000581795	EIF4G1	Q04637	1599 aa	Known RBP	32.85	■■■□□ 2.85
NARF-218	ENST00000581795	CECR2	Q9BXF3	1484 aa		32.75	■■■□□ 2.83
NARF-218	ENST00000581795	NCAPD3	P42695	1498 aa		31.95	■■■□□ 2.71
NARF-218	ENST00000581795	ATAD2B	Q9ULI0	1458 aa		31.88	■■■□□ 2.69
NARF-218	ENST00000581795	SMARCA4	P51532	1647 aa		31.86	■■■□□ 2.69
NARF-218	ENST00000581795	SMARCA2	P51531	1590 aa		31.75	■■■□□ 2.67
NARF-218	ENST00000581795	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	31.74	■■■□□ 2.67
NARF-218	ENST00000581795	HMGXB3	Q12766	1538 aa		31.66	■■■□□ 2.66
NARF-218	ENST00000581795	MROH2B	Q7Z745	1585 aa		31.59	■■■□□ 2.65
NARF-218	ENST00000581795	PEG3	Q9GZU2	1588 aa		31.57	■■■□□ 2.64
NARF-218	ENST00000581795	BAZ1B	Q9UIG0	1483 aa	Known RBP	31.55	■■■□□ 2.64
NARF-218	ENST00000581795	ERCC6	Q03468	1493 aa		31.36	■■■□□ 2.61
NARF-218	ENST00000581795	NES	P48681	1621 aa		31.36	■■■□□ 2.61
NARF-218	ENST00000581795	CUX2	O14529	1486 aa		31.22	■■■□□ 2.59
NARF-218	ENST00000581795	WIZ	O95785	1651 aa		31.19	■■■□□ 2.58
NARF-218	ENST00000581795	LAMC3	Q9Y6N6	1575 aa		31.11	■■■□□ 2.57
NARF-218	ENST00000581795	RSF1	Q96T23	1441 aa	Predicted RBP	31.06	■■■□□ 2.56
NARF-218	ENST00000581795	DNAJC5	Q9H3Z4	198 aa		31.02	■■■□□ 2.56
NARF-218	ENST00000581795	CADPS	Q9ULU8	1353 aa		31	■■■□□ 2.55
NARF-218	ENST00000581795	PDS5B	Q9NTI5	1447 aa		30.97	■■■□□ 2.55
NARF-218	ENST00000581795	THOC2	Q8NI27	1593 aa	Known RBP	30.91	■■■□□ 2.54
NARF-218	ENST00000581795	KIF21A	Q7Z4S6	1674 aa		30.88	■■■□□ 2.53
NARF-218	ENST00000581795	TOP2A	P11388	1531 aa	Known RBP	30.79	■■■□□ 2.52
NARF-218	ENST00000581795	CFTR	P13569	1480 aa		30.68	■■■□□ 2.5
NARF-218	ENST00000581795	MRC2	Q9UBG0	1479 aa		30.67	■■■□□ 2.5
NARF-218	ENST00000581795	FANCD2	Q9BXW9	1451 aa		30.6	■■■□□ 2.49
NARF-218	ENST00000581795	CEP164	Q9UPV0	1460 aa		30.58	■■■□□ 2.49
NARF-218	ENST00000581795	WDR62	O43379	1518 aa		30.57	■■■□□ 2.48
NARF-218	ENST00000581795	CCDC88B	A6NC98	1476 aa		30.51	■■■□□ 2.47
NARF-218	ENST00000581795	URB2	Q14146	1524 aa	Known RBP	30.36	■■■□□ 2.45
NARF-218	ENST00000581795	PRDM2	Q13029	1718 aa		30.26	■■■□□ 2.43
NARF-218	ENST00000581795	TOPBP1	Q92547	1522 aa		30.06	■■■□□ 2.4
NARF-218	ENST00000581795	ABCC8	Q09428	1581 aa		29.99	■■■□□ 2.39
NARF-218	ENST00000581795	IFT140	Q96RY7	1462 aa		29.99	■■■□□ 2.39
NARF-218	ENST00000581795	ZNF608	Q9ULD9	1512 aa	Predicted RBP	29.95	■■■□□ 2.39
NARF-218	ENST00000581795	OSCAR	Q8IYS5	282 aa		29.94	■■■□□ 2.38
NARF-218	ENST00000581795	DNMBP	Q6XZF7	1577 aa		29.94	■■■□□ 2.38
NARF-218	ENST00000581795	SUPT5H	O00267	1087 aa	Known RBP	29.91	■■■□□ 2.38
NARF-218	ENST00000581795	POLA1	P09884	1462 aa	Predicted RBP	29.77	■■■□□ 2.36
NARF-218	ENST00000581795	TARBP1	Q13395	1621 aa	Known RBP	29.76	■■■□□ 2.35
NARF-218	ENST00000581795	TRIM41	Q8WV44	630 aa		29.73	■■■□□ 2.35
NARF-218	ENST00000581795	AQR	O60306	1485 aa	Known RBP eCLIP	29.73	■■■□□ 2.35	2e-11	■■■■□ 23.3
NARF-218	ENST00000581795	EIF4G3	O43432	1585 aa	Known RBP	29.71	■■■□□ 2.35
NARF-218	ENST00000581795	RAD54L2	Q9Y4B4	1467 aa		29.69	■■■□□ 2.34
NARF-218	ENST00000581795	SOGA1	O94964	1423 aa		29.68	■■■□□ 2.34
NARF-218	ENST00000581795	CUX1	P39880	1505 aa		29.65	■■■□□ 2.34
NARF-218	ENST00000581795	FGD5	Q6ZNL6	1462 aa		29.61	■■■□□ 2.33
NARF-218	ENST00000581795	TDRD9	Q8NDG6	1382 aa	Known RBP	29.6	■■■□□ 2.33
NARF-218	ENST00000581795	FBLN2	P98095	1184 aa		29.48	■■■□□ 2.31
NARF-218	ENST00000581795	CHD1	O14646	1710 aa		29.44	■■■□□ 2.3
NARF-218	ENST00000581795	WDR97	A6NE52	1622 aa		29.41	■■■□□ 2.3
NARF-218	ENST00000581795	RIMBP3C	A6NJZ7	1639 aa		29.41	■■■□□ 2.3
NARF-218	ENST00000581795	RIMBP3B	A6NNM3	1639 aa		29.41	■■■□□ 2.3
NARF-218	ENST00000581795	RIMBP3	Q9UFD9	1639 aa		29.41	■■■□□ 2.3
NARF-218	ENST00000581795	SNAPC4	Q5SXM2	1469 aa		29.38	■■■□□ 2.29
NARF-218	ENST00000581795	ARHGEF11	O15085	1522 aa		29.37	■■■□□ 2.29
NARF-218	ENST00000581795	GRIN2B	Q13224	1484 aa		29.35	■■■□□ 2.29
NARF-218	ENST00000581795	CHMP7	Q8WUX9	453 aa	Predicted RBP	29.32	■■■□□ 2.28
NARF-218	ENST00000581795	MAGI1	Q96QZ7	1491 aa	Predicted RBP	29.3	■■■□□ 2.28
NARF-218	ENST00000581795	ABCA10	Q8WWZ4	1543 aa		29.3	■■■□□ 2.28
NARF-218	ENST00000581795	GAPVD1	Q14C86	1478 aa		29.29	■■■□□ 2.28
NARF-218	ENST00000581795	WRN	Q14191	1432 aa	Predicted RBP eCLIP	29.25	■■■□□ 2.27	3e-6	■□□□□ 10.3
NARF-218	ENST00000581795	CYB5RL	Q6IPT4	315 aa		29.22	■■■□□ 2.27
NARF-218	ENST00000581795	SYNJ2	O15056	1496 aa		29.21	■■■□□ 2.27
NARF-218	ENST00000581795	TOP2B	Q02880	1626 aa		29.2	■■■□□ 2.27
NARF-218	ENST00000581795	SYNJ1	O43426	1573 aa		29.2	■■■□□ 2.26
NARF-218	ENST00000581795	ABCA5	Q8WWZ7	1642 aa		29.19	■■■□□ 2.26
NARF-218	ENST00000581795	BIVM-ERCC5	R4GMW8	1640 aa		29.18	■■■□□ 2.26
NARF-218	ENST00000581795	PBRM1	Q86U86	1689 aa		29.17	■■■□□ 2.26
NARF-218	ENST00000581795	CLASP1	Q7Z460	1538 aa		29.14	■■■□□ 2.26
NARF-218	ENST00000581795	ARAP1	Q96P48	1450 aa		29.12	■■■□□ 2.25
NARF-218	ENST00000581795	GRIN2A	Q12879	1464 aa		28.96	■■■□□ 2.23
NARF-218	ENST00000581795	ADAMTS12	P58397	1594 aa		28.94	■■■□□ 2.22
NARF-218	ENST00000581795	FHAD1	B1AJZ9	1412 aa		28.93	■■■□□ 2.22
NARF-218	ENST00000581795	ERICH3	Q5RHP9	1530 aa		28.91	■■■□□ 2.22
NARF-218	ENST00000581795	NUP160	Q12769	1436 aa		28.88	■■■□□ 2.21
NARF-218	ENST00000581795	CEP170	Q5SW79	1584 aa		28.84	■■■□□ 2.21
NARF-218	ENST00000581795	TRH	P20396	242 aa	Predicted RBP	28.78	■■■□□ 2.2
NARF-218	ENST00000581795	ERCC6L2	Q5T890	1561 aa		28.76	■■■□□ 2.19
NARF-218	ENST00000581795	IGF1R	P08069	1367 aa		28.71	■■■□□ 2.19
NARF-218	ENST00000581795	SHROOM2	Q13796	1616 aa		28.68	■■■□□ 2.18
NARF-218	ENST00000581795	KIF27	Q86VH2	1401 aa		28.68	■■■□□ 2.18
NARF-218	ENST00000581795	JPH4	Q96JJ6	628 aa		28.65	■■■□□ 2.18
NARF-218	ENST00000581795	PRG4	Q92954	1404 aa	Predicted RBP	28.6	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms