RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 NISCHQ9Y2I1 1504 aa27.98■■■□□ 2.07
SNAI1-201ENST00000244050 ABCC9O60706 1549 aa24.96■■□□□ 1.59
SNAI1-201ENST00000244050 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
SNAI1-201ENST00000244050 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
SNAI1-201ENST00000244050 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
SNAI1-201ENST00000244050 ZCCHC6Q5VYS8 1495 aaKnown RBP23.53■■□□□ 1.36
SNAI1-201ENST00000244050 NACADO15069 1562 aa23.49■■□□□ 1.35
SNAI1-201ENST00000244050 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
SNAI1-201ENST00000244050 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.31
SNAI1-201ENST00000244050 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
SNAI1-201ENST00000244050 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
SNAI1-201ENST00000244050 DCAF1Q9Y4B6 1507 aa23.11■■□□□ 1.29
SNAI1-201ENST00000244050 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
SNAI1-201ENST00000244050 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
SNAI1-201ENST00000244050 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
SNAI1-201ENST00000244050 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
SNAI1-201ENST00000244050 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
SNAI1-201ENST00000244050 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
SNAI1-201ENST00000244050 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
SNAI1-201ENST00000244050 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
SNAI1-201ENST00000244050 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
SNAI1-201ENST00000244050 DNAJC5Q9H3Z4 198 aa21.7■■□□□ 1.06
SNAI1-201ENST00000244050 ATAD2BQ9ULI0 1458 aa21.65■■□□□ 1.06
SNAI1-201ENST00000244050 MROH2BQ7Z745 1585 aa21.64■■□□□ 1.05
SNAI1-201ENST00000244050 BAZ1AQ9NRL2 1556 aaPredicted RBP21.63■■□□□ 1.05
SNAI1-201ENST00000244050 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
SNAI1-201ENST00000244050 CUX2O14529 1486 aa21.54■■□□□ 1.04
SNAI1-201ENST00000244050 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
SNAI1-201ENST00000244050 HMGXB3Q12766 1538 aa21.52■■□□□ 1.04
SNAI1-201ENST00000244050 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
SNAI1-201ENST00000244050 WIZO95785 1651 aa21.5■■□□□ 1.03
SNAI1-201ENST00000244050 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
SNAI1-201ENST00000244050 NESP48681 1621 aa21.44■■□□□ 1.02
SNAI1-201ENST00000244050 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
SNAI1-201ENST00000244050 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
SNAI1-201ENST00000244050 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
SNAI1-201ENST00000244050 THOC2Q8NI27 1593 aaKnown RBP21.22■□□□□ 0.99
SNAI1-201ENST00000244050 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
SNAI1-201ENST00000244050 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
SNAI1-201ENST00000244050 PDS5BQ9NTI5 1447 aa21.09■□□□□ 0.97
SNAI1-201ENST00000244050 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
SNAI1-201ENST00000244050 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
SNAI1-201ENST00000244050 MRC2Q9UBG0 1479 aa20.93■□□□□ 0.94
SNAI1-201ENST00000244050 WDR62O43379 1518 aa20.9■□□□□ 0.94
SNAI1-201ENST00000244050 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
SNAI1-201ENST00000244050 FANCD2Q9BXW9 1451 aa20.8■□□□□ 0.92
SNAI1-201ENST00000244050 CFTRP13569 1480 aa20.79■□□□□ 0.92
SNAI1-201ENST00000244050 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
SNAI1-201ENST00000244050 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
SNAI1-201ENST00000244050 URB2Q14146 1524 aaKnown RBP20.67■□□□□ 0.9
SNAI1-201ENST00000244050 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
SNAI1-201ENST00000244050 OSCARQ8IYS5 282 aa20.53■□□□□ 0.88
SNAI1-201ENST00000244050 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
SNAI1-201ENST00000244050 WRNQ14191 1432 aaPredicted RBP eCLIP20.47■□□□□ 0.87
SNAI1-201ENST00000244050 ZNF608Q9ULD9 1512 aaPredicted RBP20.44■□□□□ 0.86
SNAI1-201ENST00000244050 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
SNAI1-201ENST00000244050 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
SNAI1-201ENST00000244050 FAM9AQ8IZU1 332 aaPredicted RBP20.4■□□□□ 0.86
SNAI1-201ENST00000244050 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
SNAI1-201ENST00000244050 PCGF6Q9BYE7 350 aa20.36■□□□□ 0.85
SNAI1-201ENST00000244050 TOP2BQ02880 1626 aa20.31■□□□□ 0.84
SNAI1-201ENST00000244050 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
SNAI1-201ENST00000244050 HRCP23327 699 aa20.3■□□□□ 0.84
SNAI1-201ENST00000244050 RIMBP3CA6NJZ7 1639 aa20.3■□□□□ 0.84
SNAI1-201ENST00000244050 RIMBP3BA6NNM3 1639 aa20.3■□□□□ 0.84
SNAI1-201ENST00000244050 RIMBP3Q9UFD9 1639 aa20.3■□□□□ 0.84
SNAI1-201ENST00000244050 DNMBPQ6XZF7 1577 aa20.3■□□□□ 0.84
SNAI1-201ENST00000244050 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
SNAI1-201ENST00000244050 SOGA1O94964 1423 aa20.24■□□□□ 0.83
SNAI1-201ENST00000244050 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
SNAI1-201ENST00000244050 ARHGEF11O15085 1522 aa20.23■□□□□ 0.83
SNAI1-201ENST00000244050 CUX1P39880 1505 aa20.23■□□□□ 0.83
SNAI1-201ENST00000244050 AQRO60306 1485 aaKnown RBP eCLIP20.22■□□□□ 0.833e-9■■□□□ 12.4
SNAI1-201ENST00000244050 TRIM26Q12899 539 aaPredicted RBP20.22■□□□□ 0.83
SNAI1-201ENST00000244050 EEA1Q15075 1411 aa20.21■□□□□ 0.83
SNAI1-201ENST00000244050 POLA1P09884 1462 aaPredicted RBP20.19■□□□□ 0.82
SNAI1-201ENST00000244050 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
SNAI1-201ENST00000244050 EHMT2Q96KQ7 1210 aa20.15■□□□□ 0.82
SNAI1-201ENST00000244050 CHD1O14646 1710 aa20.13■□□□□ 0.81
SNAI1-201ENST00000244050 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
SNAI1-201ENST00000244050 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
SNAI1-201ENST00000244050 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
SNAI1-201ENST00000244050 CYB5RLQ6IPT4 315 aa20.07■□□□□ 0.8
SNAI1-201ENST00000244050 FBLN2P98095 1184 aa20.05■□□□□ 0.8
SNAI1-201ENST00000244050 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
SNAI1-201ENST00000244050 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
SNAI1-201ENST00000244050 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
SNAI1-201ENST00000244050 KIF21BO75037 1637 aa19.98■□□□□ 0.79
SNAI1-201ENST00000244050 WDR97A6NE52 1622 aa19.97■□□□□ 0.79
SNAI1-201ENST00000244050 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
SNAI1-201ENST00000244050 KIF27Q86VH2 1401 aa19.95■□□□□ 0.78
SNAI1-201ENST00000244050 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
SNAI1-201ENST00000244050 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
SNAI1-201ENST00000244050 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
SNAI1-201ENST00000244050 TNIKQ9UKE5 1360 aa19.89■□□□□ 0.77
SNAI1-201ENST00000244050 CHMP7Q8WUX9 453 aaPredicted RBP19.89■□□□□ 0.77
SNAI1-201ENST00000244050 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
SNAI1-201ENST00000244050 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
SNAI1-201ENST00000244050 TRHP20396 242 aaPredicted RBP19.84■□□□□ 0.77
SNAI1-201ENST00000244050 GAPVD1Q14C86 1478 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms