Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.819e-8■■□□□ 14.1
XRN2Q9H0D6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.059e-8■■□□□ 14.1
XRN2Q9H0D6 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.379e-8■■□□□ 14.1
XRN2Q9H0D6 EEF1A1-204ENST00000356303 635 ntTSL 210.95□□□□□ -0.669e-8■■□□□ 14.1
XRN2Q9H0D6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.48□□□□□ -1.539e-8■■□□□ 14.1
XRN2Q9H0D6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.42□□□□□ -1.79e-8■■□□□ 14.1
XRN2Q9H0D6 PPP6R2-208ENST00000473283 550 ntTSL 417.1■□□□□ 0.332e-8■■□□□ 14.1
XRN2Q9H0D6 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC11.19□□□□□ -0.622e-7■■□□□ 14.1
XRN2Q9H0D6 EIF4G3-206ENST00000411888 1122 ntTSL 532.18■■■□□ 2.741e-7■■□□□ 14.1
XRN2Q9H0D6 EIF4G3-208ENST00000438975 1270 ntTSL 523.02■■□□□ 1.281e-7■■□□□ 14.1
XRN2Q9H0D6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.16■□□□□ 0.51e-7■■□□□ 14.1
XRN2Q9H0D6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.241e-7■■□□□ 14.1
XRN2Q9H0D6 EIF4G3-213ENST00000634778 1343 ntTSL 216.41■□□□□ 0.221e-7■■□□□ 14.1
XRN2Q9H0D6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.131e-7■■□□□ 14.1
XRN2Q9H0D6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.11e-7■■□□□ 14.1
XRN2Q9H0D6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.354e-6■■□□□ 14.1
XRN2Q9H0D6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.71■□□□□ 0.114e-6■■□□□ 14.1
XRN2Q9H0D6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.396e-7■■□□□ 14.1
XRN2Q9H0D6 AC006077.2-201ENST00000623591 457 ntBASIC35.82■■■■□ 3.321e-9■■□□□ 14.1
XRN2Q9H0D6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.751e-9■■□□□ 14.1
XRN2Q9H0D6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.73e-6■■□□□ 14.1
XRN2Q9H0D6 GGA2-215ENST00000569189 586 ntTSL 528.76■■■□□ 2.193e-6■■□□□ 14.1
XRN2Q9H0D6 GGA2-203ENST00000562944 388 ntTSL 527.68■■■□□ 2.023e-6■■□□□ 14.1
XRN2Q9H0D6 URI1-209ENST00000574666 844 ntTSL 527.26■■□□□ 1.953e-6■■□□□ 14.1
XRN2Q9H0D6 GGA2-206ENST00000566547 603 ntTSL 227.05■■□□□ 1.923e-6■■□□□ 14.1
XRN2Q9H0D6 GGA2-204ENST00000563047 366 ntTSL 525.89■■□□□ 1.743e-6■■□□□ 14.1
XRN2Q9H0D6 GGA2-205ENST00000563494 553 ntTSL 525.34■■□□□ 1.653e-6■■□□□ 14.1
XRN2Q9H0D6 GGA2-212ENST00000568799 1403 ntTSL 525.11■■□□□ 1.613e-6■■□□□ 14.1
XRN2Q9H0D6 URI1-206ENST00000574110 2495 ntTSL 1 (best)24.9■■□□□ 1.583e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-206ENST00000526734 570 ntTSL 224.44■■□□□ 1.53e-6■■□□□ 14.1
XRN2Q9H0D6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.75■■□□□ 1.393e-6■■□□□ 14.1
XRN2Q9H0D6 CYBA-203ENST00000562209 624 ntTSL 523.62■■□□□ 1.373e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-212ENST00000530836 1613 ntTSL 523.58■■□□□ 1.363e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-208ENST00000527797 1609 ntTSL 522.84■■□□□ 1.253e-6■■□□□ 14.1
XRN2Q9H0D6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.01■■□□□ 1.113e-6■■□□□ 14.1
XRN2Q9H0D6 JUP-212ENST00000591690 583 ntTSL 321.81■■□□□ 1.083e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-209ENST00000528142 1821 ntTSL 321.72■■□□□ 1.073e-6■■□□□ 14.1
XRN2Q9H0D6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.072e-6■■□□□ 14.1
XRN2Q9H0D6 LCORL-206ENST00000512376 500 ntTSL 521.7■■□□□ 1.063e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-205ENST00000526204 2120 ntTSL 521.29■■□□□ 13e-6■■□□□ 14.1
XRN2Q9H0D6 KRT8-210ENST00000548998 918 ntTSL 521.05■□□□□ 0.963e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-207ENST00000526977 2036 ntTSL 520.54■□□□□ 0.883e-6■■□□□ 14.1
XRN2Q9H0D6 KRT8-204ENST00000546826 1165 ntTSL 520.53■□□□□ 0.883e-6■■□□□ 14.1
XRN2Q9H0D6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.831e-6■■□□□ 14.1
XRN2Q9H0D6 NQO2-207ENST00000397717 833 ntTSL 519.92■□□□□ 0.783e-6■■□□□ 14.1
XRN2Q9H0D6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.82■□□□□ 0.762e-6■■□□□ 14.1
XRN2Q9H0D6 SLC16A1-204ENST00000458229 2201 ntTSL 219.82■□□□□ 0.769e-9■■□□□ 14.1
XRN2Q9H0D6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.76■□□□□ 0.753e-6■■□□□ 14.1
XRN2Q9H0D6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.75■□□□□ 0.753e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-213ENST00000530983 2337 ntTSL 519.01■□□□□ 0.633e-6■■□□□ 14.1
XRN2Q9H0D6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.63e-6■■□□□ 14.1
XRN2Q9H0D6 CYBA-202ENST00000561972 464 ntTSL 318.78■□□□□ 0.63e-6■■□□□ 14.1
XRN2Q9H0D6 NEK7-205ENST00000442588 519 ntTSL 518.7■□□□□ 0.582e-6■■□□□ 14.1
XRN2Q9H0D6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.583e-6■■□□□ 14.1
XRN2Q9H0D6 CYBA-204ENST00000563526 1052 ntTSL 218.54■□□□□ 0.563e-6■■□□□ 14.1
XRN2Q9H0D6 JUP-205ENST00000424457 949 ntTSL 318.24■□□□□ 0.513e-6■■□□□ 14.1
XRN2Q9H0D6 JUP-206ENST00000437187 1029 ntTSL 318.24■□□□□ 0.513e-6■■□□□ 14.1
XRN2Q9H0D6 STRN4-207ENST00000594357 850 ntTSL 518.22■□□□□ 0.513e-6■■□□□ 14.1
XRN2Q9H0D6 STRN4-218ENST00000600358 1267 ntTSL 518.22■□□□□ 0.513e-6■■□□□ 14.1
XRN2Q9H0D6 STRN4-221ENST00000601631 1125 ntTSL 218.22■□□□□ 0.513e-6■■□□□ 14.1
XRN2Q9H0D6 SEMA4C-205ENST00000474420 2625 ntTSL 218.13■□□□□ 0.493e-6■■□□□ 14.1
XRN2Q9H0D6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18■□□□□ 0.473e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-215ENST00000531924 695 ntTSL 317.83■□□□□ 0.443e-6■■□□□ 14.1
XRN2Q9H0D6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.443e-6■■□□□ 14.1
XRN2Q9H0D6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.76■□□□□ 0.433e-6■■□□□ 14.1
XRN2Q9H0D6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.62■□□□□ 0.413e-6■■□□□ 14.1
XRN2Q9H0D6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.43e-6■■□□□ 14.1
XRN2Q9H0D6 STRN4-208ENST00000594581 2692 ntTSL 217.39■□□□□ 0.372e-7■■□□□ 14.1
XRN2Q9H0D6 LCORL-205ENST00000510451 1013 ntTSL 217.36■□□□□ 0.373e-6■■□□□ 14.1
XRN2Q9H0D6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.35■□□□□ 0.373e-6■■□□□ 14.1
XRN2Q9H0D6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.363e-6■■□□□ 14.1
XRN2Q9H0D6 CRELD1-209ENST00000482691 690 ntTSL 317.27■□□□□ 0.361e-6■■□□□ 14.1
XRN2Q9H0D6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.21■□□□□ 0.351e-6■■□□□ 14.1
XRN2Q9H0D6 ITGA5-212ENST00000552583 568 ntTSL 216.81■□□□□ 0.283e-6■■□□□ 14.1
XRN2Q9H0D6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.271e-6■■□□□ 14.1
XRN2Q9H0D6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.243e-6■■□□□ 14.1
XRN2Q9H0D6 CRELD1-205ENST00000435417 966 ntTSL 516.47■□□□□ 0.231e-6■■□□□ 14.1
XRN2Q9H0D6 INTS11-234ENST00000527383 668 ntTSL 316.47■□□□□ 0.233e-6■■□□□ 14.1
XRN2Q9H0D6 STRN4-206ENST00000594287 951 ntTSL 516.28■□□□□ 0.23e-6■■□□□ 14.1
XRN2Q9H0D6 ANKRD23-205ENST00000476975 1132 ntTSL 516.27■□□□□ 0.23e-6■■□□□ 14.1
XRN2Q9H0D6 JUP-211ENST00000589036 566 ntTSL 416.27■□□□□ 0.23e-6■■□□□ 14.1
XRN2Q9H0D6 KRT8-212ENST00000549198 592 ntTSL 216.24■□□□□ 0.193e-6■■□□□ 14.1
XRN2Q9H0D6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.193e-6■■□□□ 14.1
XRN2Q9H0D6 ANKRD23-206ENST00000482175 2040 ntTSL 216.24■□□□□ 0.193e-6■■□□□ 14.1
XRN2Q9H0D6 CYBA-206ENST00000566229 405 ntTSL 316.07■□□□□ 0.166e-7■■□□□ 14.1
XRN2Q9H0D6 CYBA-207ENST00000566534 1006 ntTSL 516.07■□□□□ 0.166e-7■■□□□ 14.1
XRN2Q9H0D6 STRN4-211ENST00000595357 1602 ntTSL 216.06■□□□□ 0.162e-7■■□□□ 14.1
XRN2Q9H0D6 CRELD1-210ENST00000489674 437 ntTSL 516.05■□□□□ 0.161e-6■■□□□ 14.1
XRN2Q9H0D6 KRT8-214ENST00000551318 507 ntTSL 215.96■□□□□ 0.153e-6■■□□□ 14.1
XRN2Q9H0D6 NQO2-204ENST00000380454 851 ntTSL 2 BASIC15.71■□□□□ 0.113e-6■■□□□ 14.1
XRN2Q9H0D6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.083e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.083e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15.53■□□□□ 0.083e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC15.53■□□□□ 0.083e-6■■□□□ 14.1
XRN2Q9H0D6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.072e-6■■□□□ 14.1
XRN2Q9H0D6 CYBA-209ENST00000568278 439 ntTSL 515.42■□□□□ 0.063e-6■■□□□ 14.1
XRN2Q9H0D6 VPS28-216ENST00000533806 650 ntTSL 315.17■□□□□ 0.023e-6■■□□□ 14.1
XRN2Q9H0D6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 03e-6■■□□□ 14.1
XRN2Q9H0D6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -09e-9■■□□□ 14.1
XRN2Q9H0D6 ANKRD39-202ENST00000443120 4965 ntTSL 214.97□□□□□ -0.013e-6■■□□□ 14.1
Retrieved 100 of 21,068 protein–RNA pairs in 140.8 ms