RNA–Protein interactions for RNA: ENST00000600358.7

STRN4-218, Transcript of striatin 4, humanhuman

TSL 5

Gene STRN4, Length 1,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-218ENST00000600358 NISCHQ9Y2I1 1504 aa38.64■■■■□ 3.78
STRN4-218ENST00000600358 CCDC180Q9P1Z9 1646 aa34.22■■■■□ 3.07
STRN4-218ENST00000600358 ABCC9O60706 1549 aa32.47■■■□□ 2.79
STRN4-218ENST00000600358 ZCCHC6Q5VYS8 1495 aaKnown RBP32.39■■■□□ 2.78
STRN4-218ENST00000600358 DCAF1Q9Y4B6 1507 aa32.14■■■□□ 2.74
STRN4-218ENST00000600358 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
STRN4-218ENST00000600358 NACADO15069 1562 aa31.9■■■□□ 2.7
STRN4-218ENST00000600358 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
STRN4-218ENST00000600358 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
STRN4-218ENST00000600358 UNC13AQ9UPW8 1703 aa31.12■■■□□ 2.57
STRN4-218ENST00000600358 SCRIBQ14160 1630 aa31.08■■■□□ 2.57
STRN4-218ENST00000600358 BICRAQ9NZM4 1560 aa30.75■■■□□ 2.51
STRN4-218ENST00000600358 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
STRN4-218ENST00000600358 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
STRN4-218ENST00000600358 BAZ1AQ9NRL2 1556 aaPredicted RBP29.94■■■□□ 2.38
STRN4-218ENST00000600358 CECR2Q9BXF3 1484 aa29.92■■■□□ 2.38
STRN4-218ENST00000600358 SMARCA4P51532 1647 aa29.88■■■□□ 2.37
STRN4-218ENST00000600358 EIF4G1Q04637 1599 aaKnown RBP29.86■■■□□ 2.37
STRN4-218ENST00000600358 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
STRN4-218ENST00000600358 PEG3Q9GZU2 1588 aa29.65■■■□□ 2.34
STRN4-218ENST00000600358 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
STRN4-218ENST00000600358 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
STRN4-218ENST00000600358 SMARCA2P51531 1590 aa29.53■■■□□ 2.32
STRN4-218ENST00000600358 WIZO95785 1651 aa29.49■■■□□ 2.31
STRN4-218ENST00000600358 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
STRN4-218ENST00000600358 HMGXB3Q12766 1538 aa29.38■■■□□ 2.29
STRN4-218ENST00000600358 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
STRN4-218ENST00000600358 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
STRN4-218ENST00000600358 BAZ1BQ9UIG0 1483 aaKnown RBP29.24■■■□□ 2.27
STRN4-218ENST00000600358 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
STRN4-218ENST00000600358 DNAJC5BQ9UF47 199 aa29.04■■■□□ 2.24
STRN4-218ENST00000600358 CCDC88BA6NC98 1476 aa28.81■■■□□ 2.2
STRN4-218ENST00000600358 PRDM2Q13029 1718 aa28.59■■■□□ 2.17
STRN4-218ENST00000600358 LAMC3Q9Y6N6 1575 aa28.54■■■□□ 2.16
STRN4-218ENST00000600358 CFTRP13569 1480 aa28.52■■■□□ 2.16
STRN4-218ENST00000600358 CADPSQ9ULU8 1353 aa28.47■■■□□ 2.15
STRN4-218ENST00000600358 NESP48681 1621 aa28.33■■■□□ 2.13
STRN4-218ENST00000600358 PDS5BQ9NTI5 1447 aa28.21■■■□□ 2.11
STRN4-218ENST00000600358 KIF21AQ7Z4S6 1674 aa28.18■■■□□ 2.1
STRN4-218ENST00000600358 FANCD2Q9BXW9 1451 aa28.16■■■□□ 2.1
STRN4-218ENST00000600358 CEP164Q9UPV0 1460 aa28.09■■■□□ 2.09
STRN4-218ENST00000600358 ABCC8Q09428 1581 aa27.98■■■□□ 2.07
STRN4-218ENST00000600358 BIVM-ERCC5R4GMW8 1640 aa27.96■■■□□ 2.07
STRN4-218ENST00000600358 ERCC6Q03468 1493 aa27.95■■■□□ 2.07
STRN4-218ENST00000600358 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
STRN4-218ENST00000600358 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
STRN4-218ENST00000600358 DNMBPQ6XZF7 1577 aa27.92■■■□□ 2.06
STRN4-218ENST00000600358 MRC2Q9UBG0 1479 aa27.91■■■□□ 2.06
STRN4-218ENST00000600358 TOP2BQ02880 1626 aa27.9■■■□□ 2.06
STRN4-218ENST00000600358 CUX1P39880 1505 aa27.88■■■□□ 2.05
STRN4-218ENST00000600358 SYNJ1O43426 1573 aa27.88■■■□□ 2.05
STRN4-218ENST00000600358 WDR62O43379 1518 aa27.87■■■□□ 2.05
STRN4-218ENST00000600358 URB2Q14146 1524 aaKnown RBP27.86■■■□□ 2.05
STRN4-218ENST00000600358 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
STRN4-218ENST00000600358 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
STRN4-218ENST00000600358 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
STRN4-218ENST00000600358 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.01
STRN4-218ENST00000600358 WDR97A6NE52 1622 aa27.59■■■□□ 2.01
STRN4-218ENST00000600358 TRIM41Q8WV44 630 aa27.58■■■□□ 2.01
STRN4-218ENST00000600358 CUX2O14529 1486 aa27.54■■■□□ 2
STRN4-218ENST00000600358 TARBP1Q13395 1621 aaKnown RBP27.54■■■□□ 2
STRN4-218ENST00000600358 ABCA10Q8WWZ4 1543 aa27.48■■□□□ 1.99
STRN4-218ENST00000600358 IFT140Q96RY7 1462 aa27.48■■□□□ 1.99
STRN4-218ENST00000600358 SOGA1O94964 1423 aa27.44■■□□□ 1.98
STRN4-218ENST00000600358 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
STRN4-218ENST00000600358 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
STRN4-218ENST00000600358 EEA1Q15075 1411 aa27.33■■□□□ 1.96
STRN4-218ENST00000600358 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
STRN4-218ENST00000600358 EIF4G3O43432 1585 aaKnown RBP27.28■■□□□ 1.96
STRN4-218ENST00000600358 PBRM1Q86U86 1689 aa27.25■■□□□ 1.95
STRN4-218ENST00000600358 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
STRN4-218ENST00000600358 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
STRN4-218ENST00000600358 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
STRN4-218ENST00000600358 RUSC2Q8N2Y8 1516 aa27.18■■□□□ 1.94
STRN4-218ENST00000600358 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.94
STRN4-218ENST00000600358 CUL7Q14999 1698 aa27.14■■□□□ 1.93
STRN4-218ENST00000600358 GRIN2BQ13224 1484 aa27.12■■□□□ 1.93
STRN4-218ENST00000600358 AQRO60306 1485 aaKnown RBP eCLIP27.11■■□□□ 1.932e-7■■■■■ 28.7
STRN4-218ENST00000600358 ADAMTS12P58397 1594 aa27.04■■□□□ 1.92
STRN4-218ENST00000600358 KIF21BO75037 1637 aa27.04■■□□□ 1.92
STRN4-218ENST00000600358 IGF1RP08069 1367 aa27.03■■□□□ 1.92
STRN4-218ENST00000600358 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
STRN4-218ENST00000600358 PRXQ9BXM0 1461 aa27■■□□□ 1.91
STRN4-218ENST00000600358 CSRNP3Q8WYN3 585 aa26.98■■□□□ 1.91
STRN4-218ENST00000600358 SNAPC4Q5SXM2 1469 aa26.97■■□□□ 1.91
STRN4-218ENST00000600358 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
STRN4-218ENST00000600358 CARMIL1Q5VZK9 1371 aa26.89■■□□□ 1.9
STRN4-218ENST00000600358 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
STRN4-218ENST00000600358 SYNJ2O15056 1496 aa26.87■■□□□ 1.89
STRN4-218ENST00000600358 RAPGEF2Q9Y4G8 1499 aa26.87■■□□□ 1.89
STRN4-218ENST00000600358 GOLGA3Q08378 1498 aa26.84■■□□□ 1.89
STRN4-218ENST00000600358 CHD1O14646 1710 aa26.82■■□□□ 1.88
STRN4-218ENST00000600358 GRIN2AQ12879 1464 aa26.79■■□□□ 1.88
STRN4-218ENST00000600358 CTTNBP2Q8WZ74 1663 aa26.75■■□□□ 1.87
STRN4-218ENST00000600358 NUP160Q12769 1436 aa26.66■■□□□ 1.86
STRN4-218ENST00000600358 CEP170Q5SW79 1584 aa26.65■■□□□ 1.86
STRN4-218ENST00000600358 CHMP7Q8WUX9 453 aaPredicted RBP26.62■■□□□ 1.85
STRN4-218ENST00000600358 TNIKQ9UKE5 1360 aa26.59■■□□□ 1.85
STRN4-218ENST00000600358 KIAA0586Q9BVV6 1533 aa26.55■■□□□ 1.84
STRN4-218ENST00000600358 IQGAP2Q13576 1575 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms