RNA–Protein interactions for RNA: ENST00000594357.6

STRN4-207, Transcript of striatin 4, humanhuman

TSL 5

Gene STRN4, Length 850 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-207ENST00000594357 NISCHQ9Y2I1 1504 aa38.64■■■■□ 3.78
STRN4-207ENST00000594357 CCDC180Q9P1Z9 1646 aa34.22■■■■□ 3.07
STRN4-207ENST00000594357 ABCC9O60706 1549 aa33.05■■■□□ 2.88
STRN4-207ENST00000594357 ZCCHC6Q5VYS8 1495 aaKnown RBP32.39■■■□□ 2.78
STRN4-207ENST00000594357 DCAF1Q9Y4B6 1507 aa32.14■■■□□ 2.74
STRN4-207ENST00000594357 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
STRN4-207ENST00000594357 NACADO15069 1562 aa32■■■□□ 2.71
STRN4-207ENST00000594357 RB1CC1Q8TDY2 1594 aa31.95■■■□□ 2.71
STRN4-207ENST00000594357 DCAF8L2P0C7V8 631 aa31.75■■■□□ 2.67
STRN4-207ENST00000594357 UNC13AQ9UPW8 1703 aa31.54■■■□□ 2.64
STRN4-207ENST00000594357 SCRIBQ14160 1630 aa31.15■■■□□ 2.58
STRN4-207ENST00000594357 BICRAQ9NZM4 1560 aa31.13■■■□□ 2.57
STRN4-207ENST00000594357 PABPN1Q86U42 306 aaKnown RBP eCLIP30.84■■■□□ 2.53
STRN4-207ENST00000594357 SHROOM4Q9ULL8 1493 aa30.67■■■□□ 2.5
STRN4-207ENST00000594357 EIF4G1Q04637 1599 aaKnown RBP30.19■■■□□ 2.42
STRN4-207ENST00000594357 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
STRN4-207ENST00000594357 CC2D2AQ9P2K1 1620 aa30.01■■■□□ 2.39
STRN4-207ENST00000594357 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
STRN4-207ENST00000594357 BAZ1AQ9NRL2 1556 aaPredicted RBP29.94■■■□□ 2.38
STRN4-207ENST00000594357 SMARCA4P51532 1647 aa29.88■■■□□ 2.37
STRN4-207ENST00000594357 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
STRN4-207ENST00000594357 PEG3Q9GZU2 1588 aa29.65■■■□□ 2.34
STRN4-207ENST00000594357 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
STRN4-207ENST00000594357 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
STRN4-207ENST00000594357 SMARCA2P51531 1590 aa29.53■■■□□ 2.32
STRN4-207ENST00000594357 NCAPD3P42695 1498 aa29.5■■■□□ 2.31
STRN4-207ENST00000594357 WIZO95785 1651 aa29.49■■■□□ 2.31
STRN4-207ENST00000594357 HMGXB3Q12766 1538 aa29.44■■■□□ 2.3
STRN4-207ENST00000594357 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
STRN4-207ENST00000594357 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
STRN4-207ENST00000594357 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
STRN4-207ENST00000594357 CCDC88BA6NC98 1476 aa28.81■■■□□ 2.2
STRN4-207ENST00000594357 NESP48681 1621 aa28.76■■■□□ 2.19
STRN4-207ENST00000594357 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
STRN4-207ENST00000594357 PRDM2Q13029 1718 aa28.6■■■□□ 2.17
STRN4-207ENST00000594357 CADPSQ9ULU8 1353 aa28.59■■■□□ 2.17
STRN4-207ENST00000594357 KIF21AQ7Z4S6 1674 aa28.55■■■□□ 2.16
STRN4-207ENST00000594357 CFTRP13569 1480 aa28.55■■■□□ 2.16
STRN4-207ENST00000594357 PDS5BQ9NTI5 1447 aa28.36■■■□□ 2.13
STRN4-207ENST00000594357 THOC2Q8NI27 1593 aaKnown RBP28.36■■■□□ 2.13
STRN4-207ENST00000594357 ERCC6Q03468 1493 aa28.35■■■□□ 2.13
STRN4-207ENST00000594357 FANCD2Q9BXW9 1451 aa28.29■■■□□ 2.12
STRN4-207ENST00000594357 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
STRN4-207ENST00000594357 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
STRN4-207ENST00000594357 WDR62O43379 1518 aa28.13■■■□□ 2.09
STRN4-207ENST00000594357 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.08
STRN4-207ENST00000594357 CUX2O14529 1486 aa28.06■■■□□ 2.08
STRN4-207ENST00000594357 ABCC8Q09428 1581 aa27.98■■■□□ 2.07
STRN4-207ENST00000594357 BIVM-ERCC5R4GMW8 1640 aa27.96■■■□□ 2.07
STRN4-207ENST00000594357 DNMBPQ6XZF7 1577 aa27.93■■■□□ 2.06
STRN4-207ENST00000594357 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
STRN4-207ENST00000594357 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
STRN4-207ENST00000594357 TOP2BQ02880 1626 aa27.9■■■□□ 2.06
STRN4-207ENST00000594357 CUX1P39880 1505 aa27.88■■■□□ 2.05
STRN4-207ENST00000594357 SYNJ1O43426 1573 aa27.88■■■□□ 2.05
STRN4-207ENST00000594357 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
STRN4-207ENST00000594357 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.03
STRN4-207ENST00000594357 POLA1P09884 1462 aaPredicted RBP27.7■■■□□ 2.03
STRN4-207ENST00000594357 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
STRN4-207ENST00000594357 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
STRN4-207ENST00000594357 IFT140Q96RY7 1462 aa27.61■■■□□ 2.01
STRN4-207ENST00000594357 TRIM41Q8WV44 630 aa27.58■■■□□ 2.01
STRN4-207ENST00000594357 RAD54L2Q9Y4B4 1467 aa27.56■■■□□ 2
STRN4-207ENST00000594357 ZNF608Q9ULD9 1512 aaPredicted RBP27.54■■■□□ 2
STRN4-207ENST00000594357 EIF4G3O43432 1585 aaKnown RBP27.5■■□□□ 1.99
STRN4-207ENST00000594357 SOGA1O94964 1423 aa27.5■■□□□ 1.99
STRN4-207ENST00000594357 ABCA10Q8WWZ4 1543 aa27.48■■□□□ 1.99
STRN4-207ENST00000594357 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
STRN4-207ENST00000594357 AQRO60306 1485 aaKnown RBP eCLIP27.36■■□□□ 1.971e-7■■■■■ 33.7
STRN4-207ENST00000594357 PBRM1Q86U86 1689 aa27.34■■□□□ 1.97
STRN4-207ENST00000594357 EEA1Q15075 1411 aa27.33■■□□□ 1.96
STRN4-207ENST00000594357 TDRD9Q8NDG6 1382 aaKnown RBP27.31■■□□□ 1.96
STRN4-207ENST00000594357 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
STRN4-207ENST00000594357 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
STRN4-207ENST00000594357 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
STRN4-207ENST00000594357 RUSC2Q8N2Y8 1516 aa27.18■■□□□ 1.94
STRN4-207ENST00000594357 CHD1O14646 1710 aa27.18■■□□□ 1.94
STRN4-207ENST00000594357 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
STRN4-207ENST00000594357 CUL7Q14999 1698 aa27.14■■□□□ 1.93
STRN4-207ENST00000594357 SNAPC4Q5SXM2 1469 aa27.12■■□□□ 1.93
STRN4-207ENST00000594357 MAGI1Q96QZ7 1491 aaPredicted RBP27.09■■□□□ 1.93
STRN4-207ENST00000594357 ADAMTS12P58397 1594 aa27.06■■□□□ 1.92
STRN4-207ENST00000594357 KIF21BO75037 1637 aa27.04■■□□□ 1.92
STRN4-207ENST00000594357 IGF1RP08069 1367 aa27.03■■□□□ 1.92
STRN4-207ENST00000594357 PRXQ9BXM0 1461 aa27■■□□□ 1.91
STRN4-207ENST00000594357 CSRNP3Q8WYN3 585 aa26.98■■□□□ 1.91
STRN4-207ENST00000594357 SYNJ2O15056 1496 aa26.98■■□□□ 1.91
STRN4-207ENST00000594357 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
STRN4-207ENST00000594357 CARMIL1Q5VZK9 1371 aa26.89■■□□□ 1.9
STRN4-207ENST00000594357 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
STRN4-207ENST00000594357 RAPGEF2Q9Y4G8 1499 aa26.87■■□□□ 1.89
STRN4-207ENST00000594357 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
STRN4-207ENST00000594357 GOLGA3Q08378 1498 aa26.84■■□□□ 1.89
STRN4-207ENST00000594357 DNAJC5Q9H3Z4 198 aa26.83■■□□□ 1.89
STRN4-207ENST00000594357 CLASP1Q7Z460 1538 aa26.82■■□□□ 1.88
STRN4-207ENST00000594357 OSCARQ8IYS5 282 aa26.81■■□□□ 1.88
STRN4-207ENST00000594357 CEP170Q5SW79 1584 aa26.8■■□□□ 1.88
STRN4-207ENST00000594357 FBLN2P98095 1184 aa26.78■■□□□ 1.88
STRN4-207ENST00000594357 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
STRN4-207ENST00000594357 NUP160Q12769 1436 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms