RNA–Protein interactions for RNA: ENST00000552583.1

ITGA5-212, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-212ENST00000552583 NISCHQ9Y2I1 1504 aa34.97■■■■□ 3.19
ITGA5-212ENST00000552583 CCDC180Q9P1Z9 1646 aa31.33■■■□□ 2.61
ITGA5-212ENST00000552583 ABCC9O60706 1549 aa30.61■■■□□ 2.49
ITGA5-212ENST00000552583 RB1CC1Q8TDY2 1594 aa29.52■■■□□ 2.32
ITGA5-212ENST00000552583 NACADO15069 1562 aa29.44■■■□□ 2.3
ITGA5-212ENST00000552583 MYO15BQ96JP2 1530 aa29.26■■■□□ 2.27
ITGA5-212ENST00000552583 ZCCHC6Q5VYS8 1495 aaKnown RBP29.12■■■□□ 2.25
ITGA5-212ENST00000552583 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
ITGA5-212ENST00000552583 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
ITGA5-212ENST00000552583 UNC13AQ9UPW8 1703 aa28.82■■■□□ 2.2
ITGA5-212ENST00000552583 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
ITGA5-212ENST00000552583 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
ITGA5-212ENST00000552583 SHROOM4Q9ULL8 1493 aa28.43■■■□□ 2.14
ITGA5-212ENST00000552583 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
ITGA5-212ENST00000552583 DNAJC5BQ9UF47 199 aa28.15■■■□□ 2.1
ITGA5-212ENST00000552583 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
ITGA5-212ENST00000552583 CC2D2AQ9P2K1 1620 aa27.77■■■□□ 2.04
ITGA5-212ENST00000552583 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
ITGA5-212ENST00000552583 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
ITGA5-212ENST00000552583 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
ITGA5-212ENST00000552583 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
ITGA5-212ENST00000552583 NCAPD3P42695 1498 aa27.11■■□□□ 1.93
ITGA5-212ENST00000552583 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
ITGA5-212ENST00000552583 HMGXB3Q12766 1538 aa27.04■■□□□ 1.92
ITGA5-212ENST00000552583 PEG3Q9GZU2 1588 aa27■■□□□ 1.91
ITGA5-212ENST00000552583 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
ITGA5-212ENST00000552583 BAZ1BQ9UIG0 1483 aaKnown RBP26.86■■□□□ 1.89
ITGA5-212ENST00000552583 WIZO95785 1651 aa26.6■■□□□ 1.85
ITGA5-212ENST00000552583 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
ITGA5-212ENST00000552583 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
ITGA5-212ENST00000552583 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
ITGA5-212ENST00000552583 NESP48681 1621 aa26.41■■□□□ 1.82
ITGA5-212ENST00000552583 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
ITGA5-212ENST00000552583 CUX2O14529 1486 aa26.35■■□□□ 1.81
ITGA5-212ENST00000552583 CADPSQ9ULU8 1353 aa26.27■■□□□ 1.8
ITGA5-212ENST00000552583 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
ITGA5-212ENST00000552583 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.79
ITGA5-212ENST00000552583 KIF21AQ7Z4S6 1674 aa26.2■■□□□ 1.78
ITGA5-212ENST00000552583 CFTRP13569 1480 aa26.11■■□□□ 1.77
ITGA5-212ENST00000552583 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
ITGA5-212ENST00000552583 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
ITGA5-212ENST00000552583 CEP164Q9UPV0 1460 aa26.01■■□□□ 1.75
ITGA5-212ENST00000552583 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
ITGA5-212ENST00000552583 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
ITGA5-212ENST00000552583 WDR62O43379 1518 aa25.96■■□□□ 1.75
ITGA5-212ENST00000552583 URB2Q14146 1524 aaKnown RBP25.72■■□□□ 1.71
ITGA5-212ENST00000552583 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
ITGA5-212ENST00000552583 DNAJC5Q9H3Z4 198 aa25.61■■□□□ 1.69
ITGA5-212ENST00000552583 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
ITGA5-212ENST00000552583 TOPBP1Q92547 1522 aa25.55■■□□□ 1.68
ITGA5-212ENST00000552583 SUPT5HO00267 1087 aaKnown RBP25.53■■□□□ 1.68
ITGA5-212ENST00000552583 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
ITGA5-212ENST00000552583 POLA1P09884 1462 aaPredicted RBP25.32■■□□□ 1.64
ITGA5-212ENST00000552583 TARBP1Q13395 1621 aaKnown RBP25.31■■□□□ 1.64
ITGA5-212ENST00000552583 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
ITGA5-212ENST00000552583 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
ITGA5-212ENST00000552583 CUX1P39880 1505 aa25.27■■□□□ 1.64
ITGA5-212ENST00000552583 WDR97A6NE52 1622 aa25.24■■□□□ 1.63
ITGA5-212ENST00000552583 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
ITGA5-212ENST00000552583 SOGA1O94964 1423 aa25.16■■□□□ 1.62
ITGA5-212ENST00000552583 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
ITGA5-212ENST00000552583 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.61
ITGA5-212ENST00000552583 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.6
ITGA5-212ENST00000552583 OSCARQ8IYS5 282 aa25.07■■□□□ 1.6
ITGA5-212ENST00000552583 TOP2BQ02880 1626 aa25.05■■□□□ 1.6
ITGA5-212ENST00000552583 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
ITGA5-212ENST00000552583 ABCA10Q8WWZ4 1543 aa25.01■■□□□ 1.59
ITGA5-212ENST00000552583 CHD1O14646 1710 aa24.99■■□□□ 1.59
ITGA5-212ENST00000552583 TDRD9Q8NDG6 1382 aaKnown RBP24.99■■□□□ 1.59
ITGA5-212ENST00000552583 SYNJ1O43426 1573 aa24.98■■□□□ 1.59
ITGA5-212ENST00000552583 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
ITGA5-212ENST00000552583 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
ITGA5-212ENST00000552583 ABCA5Q8WWZ7 1642 aa24.96■■□□□ 1.59
ITGA5-212ENST00000552583 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
ITGA5-212ENST00000552583 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
ITGA5-212ENST00000552583 GAPVD1Q14C86 1478 aa24.91■■□□□ 1.58
ITGA5-212ENST00000552583 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
ITGA5-212ENST00000552583 RIMBP3CA6NJZ7 1639 aa24.77■■□□□ 1.56
ITGA5-212ENST00000552583 RIMBP3BA6NNM3 1639 aa24.77■■□□□ 1.56
ITGA5-212ENST00000552583 RIMBP3Q9UFD9 1639 aa24.77■■□□□ 1.56
ITGA5-212ENST00000552583 FBLN2P98095 1184 aa24.77■■□□□ 1.56
ITGA5-212ENST00000552583 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
ITGA5-212ENST00000552583 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
ITGA5-212ENST00000552583 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
ITGA5-212ENST00000552583 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
ITGA5-212ENST00000552583 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
ITGA5-212ENST00000552583 GRIN2AQ12879 1464 aa24.64■■□□□ 1.53
ITGA5-212ENST00000552583 FHAD1B1AJZ9 1412 aa24.63■■□□□ 1.53
ITGA5-212ENST00000552583 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
ITGA5-212ENST00000552583 NUP160Q12769 1436 aa24.55■■□□□ 1.52
ITGA5-212ENST00000552583 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
ITGA5-212ENST00000552583 CUL7Q14999 1698 aa24.51■■□□□ 1.51
ITGA5-212ENST00000552583 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
ITGA5-212ENST00000552583 CEP170Q5SW79 1584 aa24.5■■□□□ 1.51
ITGA5-212ENST00000552583 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
ITGA5-212ENST00000552583 IGF1RP08069 1367 aa24.39■■□□□ 1.49
ITGA5-212ENST00000552583 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
ITGA5-212ENST00000552583 RUSC2Q8N2Y8 1516 aa24.37■■□□□ 1.49
ITGA5-212ENST00000552583 CARMIL1Q5VZK9 1371 aa24.27■■□□□ 1.48
ITGA5-212ENST00000552583 KIAA0586Q9BVV6 1533 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms