RNA–Protein interactions for RNA: ENST00000562944.5

GGA2-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-203ENST00000562944 NISCHQ9Y2I1 1504 aa57.45■■■■■ 6.79
GGA2-203ENST00000562944 CCDC180Q9P1Z9 1646 aa51.18■■■■■ 5.78
GGA2-203ENST00000562944 ABCC9O60706 1549 aa50.41■■■■■ 5.66
GGA2-203ENST00000562944 RB1CC1Q8TDY2 1594 aa48.34■■■■■ 5.33
GGA2-203ENST00000562944 NACADO15069 1562 aa48.22■■■■■ 5.31
GGA2-203ENST00000562944 DCAF8L2P0C7V8 631 aa48.1■■■■■ 5.29
GGA2-203ENST00000562944 MYO15BQ96JP2 1530 aa47.85■■■■■ 5.25
GGA2-203ENST00000562944 ZCCHC6Q5VYS8 1495 aaKnown RBP47.78■■■■■ 5.24
GGA2-203ENST00000562944 DCAF1Q9Y4B6 1507 aa47.52■■■■■ 5.2
GGA2-203ENST00000562944 UNC13AQ9UPW8 1703 aa47.23■■■■■ 5.15
GGA2-203ENST00000562944 PABPN1Q86U42 306 aaKnown RBP eCLIP47.06■■■■■ 5.12
GGA2-203ENST00000562944 BICRAQ9NZM4 1560 aa46.91■■■■■ 5.1
GGA2-203ENST00000562944 SCRIBQ14160 1630 aa46.67■■■■■ 5.06
GGA2-203ENST00000562944 DNAJC5BQ9UF47 199 aa46.61■■■■■ 5.05
GGA2-203ENST00000562944 SHROOM4Q9ULL8 1493 aa46.38■■■■■ 5.02
GGA2-203ENST00000562944 EIF4G1Q04637 1599 aaKnown RBP45.68■■■■■ 4.9
GGA2-203ENST00000562944 CC2D2AQ9P2K1 1620 aa45.58■■■■■ 4.89
GGA2-203ENST00000562944 CECR2Q9BXF3 1484 aa45.34■■■■■ 4.85
GGA2-203ENST00000562944 SMARCA4P51532 1647 aa44.62■■■■■ 4.73
GGA2-203ENST00000562944 BAZ1AQ9NRL2 1556 aaPredicted RBP44.53■■■■■ 4.72
GGA2-203ENST00000562944 NCAPD3P42695 1498 aa44.53■■■■■ 4.72
GGA2-203ENST00000562944 ATAD2BQ9ULI0 1458 aa44.49■■■■■ 4.71
GGA2-203ENST00000562944 SMARCA2P51531 1590 aa44.39■■■■■ 4.7
GGA2-203ENST00000562944 MROH2BQ7Z745 1585 aa44.26■■■■■ 4.68
GGA2-203ENST00000562944 HMGXB3Q12766 1538 aa44.24■■■■■ 4.67
GGA2-203ENST00000562944 PEG3Q9GZU2 1588 aa44.22■■■■■ 4.67
GGA2-203ENST00000562944 BAZ1BQ9UIG0 1483 aaKnown RBP44.08■■■■■ 4.65
GGA2-203ENST00000562944 WIZO95785 1651 aa43.75■■■■■ 4.59
GGA2-203ENST00000562944 RSF1Q96T23 1441 aaPredicted RBP43.65■■■■■ 4.58
GGA2-203ENST00000562944 NESP48681 1621 aa43.53■■■■■ 4.56
GGA2-203ENST00000562944 ERCC6Q03468 1493 aa43.45■■■■■ 4.55
GGA2-203ENST00000562944 LAMC3Q9Y6N6 1575 aa43.36■■■■■ 4.53
GGA2-203ENST00000562944 TOP2AP11388 1531 aaKnown RBP43.27■■■■■ 4.52
GGA2-203ENST00000562944 CADPSQ9ULU8 1353 aa43.2■■■■■ 4.51
GGA2-203ENST00000562944 CUX2O14529 1486 aa43.13■■■■■ 4.5
GGA2-203ENST00000562944 PDS5BQ9NTI5 1447 aa43.1■■■■■ 4.49
GGA2-203ENST00000562944 KIF21AQ7Z4S6 1674 aa42.98■■■■■ 4.47
GGA2-203ENST00000562944 THOC2Q8NI27 1593 aaKnown RBP42.94■■■■■ 4.46
GGA2-203ENST00000562944 CFTRP13569 1480 aa42.87■■■■■ 4.45
GGA2-203ENST00000562944 CCDC88BA6NC98 1476 aa42.79■■■■■ 4.44
GGA2-203ENST00000562944 FANCD2Q9BXW9 1451 aa42.69■■■■■ 4.42
GGA2-203ENST00000562944 MRC2Q9UBG0 1479 aa42.67■■■■■ 4.42
GGA2-203ENST00000562944 CEP164Q9UPV0 1460 aa42.65■■■■■ 4.42
GGA2-203ENST00000562944 WDR62O43379 1518 aa42.54■■■■■ 4.4
GGA2-203ENST00000562944 PRDM2Q13029 1718 aa42.47■■■■■ 4.39
GGA2-203ENST00000562944 URB2Q14146 1524 aaKnown RBP42.3■■■■■ 4.36
GGA2-203ENST00000562944 SUPT5HO00267 1087 aaKnown RBP42.29■■■■■ 4.36
GGA2-203ENST00000562944 DNAJC5Q9H3Z4 198 aa42.22■■■■■ 4.35
GGA2-203ENST00000562944 TOPBP1Q92547 1522 aa41.98■■■■■ 4.31
GGA2-203ENST00000562944 ABCC8Q09428 1581 aa41.95■■■■■ 4.31
GGA2-203ENST00000562944 DNMBPQ6XZF7 1577 aa41.88■■■■■ 4.3
GGA2-203ENST00000562944 IFT140Q96RY7 1462 aa41.79■■■■■ 4.28
GGA2-203ENST00000562944 ZNF608Q9ULD9 1512 aaPredicted RBP41.64■■■■■ 4.26
GGA2-203ENST00000562944 POLA1P09884 1462 aaPredicted RBP41.6■■■■■ 4.25
GGA2-203ENST00000562944 CUX1P39880 1505 aa41.54■■■■■ 4.24
GGA2-203ENST00000562944 TARBP1Q13395 1621 aaKnown RBP41.54■■■■■ 4.24
GGA2-203ENST00000562944 FGD5Q6ZNL6 1462 aa41.45■■■■■ 4.23
GGA2-203ENST00000562944 RAD54L2Q9Y4B4 1467 aa41.43■■■■■ 4.22
GGA2-203ENST00000562944 SOGA1O94964 1423 aa41.43■■■■■ 4.22
GGA2-203ENST00000562944 EIF4G3O43432 1585 aaKnown RBP41.42■■■■■ 4.22
GGA2-203ENST00000562944 AQRO60306 1485 aaKnown RBP eCLIP41.36■■■■■ 4.211e-8■■■■□ 25.4
GGA2-203ENST00000562944 OSCARQ8IYS5 282 aa41.3■■■■■ 4.2
GGA2-203ENST00000562944 TDRD9Q8NDG6 1382 aaKnown RBP41.24■■■■■ 4.19
GGA2-203ENST00000562944 WDR97A6NE52 1622 aa41.18■■■■■ 4.18
GGA2-203ENST00000562944 WRNQ14191 1432 aaPredicted RBP eCLIP41.16■■■■■ 4.181e-7■■■■■ 66.8
GGA2-203ENST00000562944 TOP2BQ02880 1626 aa41.09■■■■■ 4.17
GGA2-203ENST00000562944 BIVM-ERCC5R4GMW8 1640 aa41.07■■■■■ 4.17
GGA2-203ENST00000562944 SYNJ1O43426 1573 aa41.06■■■■■ 4.16
GGA2-203ENST00000562944 ABCA10Q8WWZ4 1543 aa41.04■■■■■ 4.16
GGA2-203ENST00000562944 GRIN2BQ13224 1484 aa40.97■■■■■ 4.15
GGA2-203ENST00000562944 SNAPC4Q5SXM2 1469 aa40.96■■■■■ 4.15
GGA2-203ENST00000562944 CHD1O14646 1710 aa40.96■■■■■ 4.15
GGA2-203ENST00000562944 GAPVD1Q14C86 1478 aa40.93■■■■■ 4.14
GGA2-203ENST00000562944 FBLN2P98095 1184 aa40.91■■■■■ 4.14
GGA2-203ENST00000562944 MAGI1Q96QZ7 1491 aaPredicted RBP40.9■■■■■ 4.14
GGA2-203ENST00000562944 ABCA5Q8WWZ7 1642 aa40.89■■■■■ 4.14
GGA2-203ENST00000562944 PBRM1Q86U86 1689 aa40.83■■■■■ 4.13
GGA2-203ENST00000562944 CHMP7Q8WUX9 453 aaPredicted RBP40.76■■■■■ 4.12
GGA2-203ENST00000562944 SYNJ2O15056 1496 aa40.75■■■■■ 4.11
GGA2-203ENST00000562944 RIMBP3CA6NJZ7 1639 aa40.65■■■■■ 4.1
GGA2-203ENST00000562944 RIMBP3BA6NNM3 1639 aa40.65■■■■■ 4.1
GGA2-203ENST00000562944 RIMBP3Q9UFD9 1639 aa40.65■■■■■ 4.1
GGA2-203ENST00000562944 TRIM41Q8WV44 630 aa40.65■■■■■ 4.1
GGA2-203ENST00000562944 ARHGEF11O15085 1522 aa40.62■■■■■ 4.09
GGA2-203ENST00000562944 CLASP1Q7Z460 1538 aa40.54■■■■■ 4.08
GGA2-203ENST00000562944 ERICH3Q5RHP9 1530 aa40.53■■■■■ 4.08
GGA2-203ENST00000562944 ADAMTS12P58397 1594 aa40.52■■■■■ 4.08
GGA2-203ENST00000562944 FHAD1B1AJZ9 1412 aa40.45■■■■■ 4.07
GGA2-203ENST00000562944 GRIN2AQ12879 1464 aa40.45■■■■■ 4.07
GGA2-203ENST00000562944 KIF27Q86VH2 1401 aa40.32■■■■■ 4.04
GGA2-203ENST00000562944 NUP160Q12769 1436 aa40.3■■■■■ 4.04
GGA2-203ENST00000562944 ARAP1Q96P48 1450 aa40.28■■■■■ 4.04
GGA2-203ENST00000562944 CYB5RLQ6IPT4 315 aa40.27■■■■■ 4.04
GGA2-203ENST00000562944 CEP170Q5SW79 1584 aa40.26■■■■■ 4.04
GGA2-203ENST00000562944 IGF1RP08069 1367 aa40.23■■■■■ 4.03
GGA2-203ENST00000562944 CUL7Q14999 1698 aa40.08■■■■■ 4.01
GGA2-203ENST00000562944 SHROOM2Q13796 1616 aa40.01■■■■■ 4
GGA2-203ENST00000562944 CARMIL1Q5VZK9 1371 aa39.97■■■■□ 3.99
GGA2-203ENST00000562944 ERCC6L2Q5T890 1561 aa39.96■■■■□ 3.99
GGA2-203ENST00000562944 RUSC2Q8N2Y8 1516 aa39.92■■■■□ 3.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms