RNA–Protein interactions for RNA: ENST00000595357.5

STRN4-211, Transcript of striatin 4, humanhuman

TSL 2

Gene STRN4, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-211ENST00000595357 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
STRN4-211ENST00000595357 CCDC180Q9P1Z9 1646 aa29.19■■■□□ 2.26
STRN4-211ENST00000595357 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
STRN4-211ENST00000595357 SHROOM4Q9ULL8 1493 aa28.49■■■□□ 2.15
STRN4-211ENST00000595357 DCAF1Q9Y4B6 1507 aa28.1■■■□□ 2.09
STRN4-211ENST00000595357 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
STRN4-211ENST00000595357 ABCC9O60706 1549 aa27.51■■□□□ 1.99
STRN4-211ENST00000595357 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.99
STRN4-211ENST00000595357 MYO15BQ96JP2 1530 aa27.42■■□□□ 1.98
STRN4-211ENST00000595357 CHIC1Q5VXU3 224 aa27.4■■□□□ 1.98
STRN4-211ENST00000595357 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
STRN4-211ENST00000595357 NACADO15069 1562 aa26.79■■□□□ 1.88
STRN4-211ENST00000595357 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
STRN4-211ENST00000595357 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
STRN4-211ENST00000595357 HRCP23327 699 aa26.65■■□□□ 1.86
STRN4-211ENST00000595357 LOC105371045A0A1W2PR82 267 aa26.39■■□□□ 1.81
STRN4-211ENST00000595357 PCGF6Q9BYE7 350 aa26.39■■□□□ 1.81
STRN4-211ENST00000595357 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
STRN4-211ENST00000595357 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.81
STRN4-211ENST00000595357 WIZO95785 1651 aa26.27■■□□□ 1.8
STRN4-211ENST00000595357 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
STRN4-211ENST00000595357 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
STRN4-211ENST00000595357 DNAJC5BQ9UF47 199 aa26.13■■□□□ 1.77
STRN4-211ENST00000595357 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
STRN4-211ENST00000595357 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
STRN4-211ENST00000595357 TRIM26Q12899 539 aaPredicted RBP26.09■■□□□ 1.77
STRN4-211ENST00000595357 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
STRN4-211ENST00000595357 TOP2AP11388 1531 aaKnown RBP25.94■■□□□ 1.74
STRN4-211ENST00000595357 PPARGC1BQ86YN6 1023 aaKnown RBP25.86■■□□□ 1.73
STRN4-211ENST00000595357 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
STRN4-211ENST00000595357 FAM9AQ8IZU1 332 aaPredicted RBP25.71■■□□□ 1.71
STRN4-211ENST00000595357 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
STRN4-211ENST00000595357 ZEB1P37275 1124 aaPredicted RBP25.63■■□□□ 1.69
STRN4-211ENST00000595357 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.691e-8■□□□□ 9.8
STRN4-211ENST00000595357 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
STRN4-211ENST00000595357 ABCC8Q09428 1581 aa25.57■■□□□ 1.68
STRN4-211ENST00000595357 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
STRN4-211ENST00000595357 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.65
STRN4-211ENST00000595357 EEA1Q15075 1411 aa25.39■■□□□ 1.65
STRN4-211ENST00000595357 EHMT2Q96KQ7 1210 aa25.31■■□□□ 1.64
STRN4-211ENST00000595357 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
STRN4-211ENST00000595357 SOGA1O94964 1423 aa25.24■■□□□ 1.63
STRN4-211ENST00000595357 CEP162Q5TB80 1403 aa25.22■■□□□ 1.63
STRN4-211ENST00000595357 RUSC2Q8N2Y8 1516 aa25.14■■□□□ 1.62
STRN4-211ENST00000595357 KIF21BO75037 1637 aa25.14■■□□□ 1.62
STRN4-211ENST00000595357 SYNJ1O43426 1573 aa25.14■■□□□ 1.62
STRN4-211ENST00000595357 GOLGA3Q08378 1498 aa25.13■■□□□ 1.61
STRN4-211ENST00000595357 ATAD2BQ9ULI0 1458 aa25.13■■□□□ 1.61
STRN4-211ENST00000595357 CSRNP3Q8WYN3 585 aa25.07■■□□□ 1.6
STRN4-211ENST00000595357 BAZ1BQ9UIG0 1483 aaKnown RBP25.03■■□□□ 1.6
STRN4-211ENST00000595357 CEP164Q9UPV0 1460 aa24.99■■□□□ 1.59
STRN4-211ENST00000595357 BIVM-ERCC5R4GMW8 1640 aa24.95■■□□□ 1.58
STRN4-211ENST00000595357 TOP2BQ02880 1626 aa24.91■■□□□ 1.58
STRN4-211ENST00000595357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.85■■□□□ 1.57
STRN4-211ENST00000595357 HMGXB3Q12766 1538 aa24.82■■□□□ 1.56
STRN4-211ENST00000595357 CCER1Q8TC90 406 aaPredicted RBP24.82■■□□□ 1.56
STRN4-211ENST00000595357 CC2D2AQ9P2K1 1620 aa24.8■■□□□ 1.56
STRN4-211ENST00000595357 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
STRN4-211ENST00000595357 CLIP1P30622 1438 aa24.73■■□□□ 1.55
STRN4-211ENST00000595357 VPS8Q8N3P4 1428 aa24.72■■□□□ 1.55
STRN4-211ENST00000595357 PRDM2Q13029 1718 aa24.71■■□□□ 1.55
STRN4-211ENST00000595357 ERICH3Q5RHP9 1530 aa24.7■■□□□ 1.55
STRN4-211ENST00000595357 RAPGEF2Q9Y4G8 1499 aa24.69■■□□□ 1.54
STRN4-211ENST00000595357 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
STRN4-211ENST00000595357 PRXQ9BXM0 1461 aa24.57■■□□□ 1.52
STRN4-211ENST00000595357 TTBK1Q5TCY1 1321 aaPredicted RBP24.57■■□□□ 1.52
STRN4-211ENST00000595357 CUX1P39880 1505 aa24.55■■□□□ 1.52
STRN4-211ENST00000595357 SCAF1Q9H7N4 1312 aaKnown RBP24.49■■□□□ 1.51
STRN4-211ENST00000595357 CFTRP13569 1480 aa24.48■■□□□ 1.51
STRN4-211ENST00000595357 ARAP1Q96P48 1450 aa24.45■■□□□ 1.5
STRN4-211ENST00000595357 DIEXFQ68CQ4 756 aaKnown RBP24.42■■□□□ 1.5
STRN4-211ENST00000595357 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
STRN4-211ENST00000595357 ACIN1Q9UKV3 1341 aaKnown RBP24.32■■□□□ 1.48
STRN4-211ENST00000595357 ZNF316A6NFI3 1004 aaPredicted RBP24.31■■□□□ 1.48
STRN4-211ENST00000595357 APLP2Q06481 763 aa24.3■■□□□ 1.48
STRN4-211ENST00000595357 HNRNPUL2Q1KMD3 747 aaKnown RBP24.24■■□□□ 1.47
STRN4-211ENST00000595357 ARHGAP35Q9NRY4 1499 aa24.2■■□□□ 1.46
STRN4-211ENST00000595357 RRBP1Q9P2E9 1410 aaKnown RBP24.2■■□□□ 1.46
STRN4-211ENST00000595357 NEUROD1Q13562 356 aa24.2■■□□□ 1.46
STRN4-211ENST00000595357 PELP1Q8IZL8 1130 aaKnown RBP24.2■■□□□ 1.46
STRN4-211ENST00000595357 CLSPNQ9HAW4 1339 aa24.17■■□□□ 1.46
STRN4-211ENST00000595357 CUX2O14529 1486 aa24.16■■□□□ 1.46
STRN4-211ENST00000595357 CENPBP07199 599 aaPredicted RBP24.16■■□□□ 1.46
STRN4-211ENST00000595357 MAP3K1Q13233 1512 aa24.13■■□□□ 1.45
STRN4-211ENST00000595357 DNAJC5Q9H3Z4 198 aa24.11■■□□□ 1.45
STRN4-211ENST00000595357 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
STRN4-211ENST00000595357 DHX57Q6P158 1386 aaKnown RBP24.08■■□□□ 1.45
STRN4-211ENST00000595357 RANGAP1P46060 587 aaPredicted RBP24.06■■□□□ 1.44
STRN4-211ENST00000595357 TIAM1Q13009 1591 aa24.05■■□□□ 1.44
STRN4-211ENST00000595357 FGD5Q6ZNL6 1462 aa24.05■■□□□ 1.44
STRN4-211ENST00000595357 KANK4Q5T7N3 995 aaPredicted RBP24.05■■□□□ 1.44
STRN4-211ENST00000595357 CFAP43Q8NDM7 1665 aa24.04■■□□□ 1.44
STRN4-211ENST00000595357 IGF1RP08069 1367 aa24.04■■□□□ 1.44
STRN4-211ENST00000595357 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
STRN4-211ENST00000595357 CCNB3Q8WWL7 1395 aa23.95■■□□□ 1.42
STRN4-211ENST00000595357 CARMIL1Q5VZK9 1371 aa23.93■■□□□ 1.42
STRN4-211ENST00000595357 GTF3C3Q9Y5Q9 886 aa23.92■■□□□ 1.42
STRN4-211ENST00000595357 CTTNBP2Q8WZ74 1663 aa23.91■■□□□ 1.42
STRN4-211ENST00000595357 CUL7Q14999 1698 aa23.9■■□□□ 1.42
STRN4-211ENST00000595357 FANCD2Q9BXW9 1451 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms