RNA–Protein interactions for RNA: ENST00000619952.2

KRT8-217, Transcript of keratin 8, humanhuman

TSL 2 BASIC

Gene KRT8, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT8-217ENST00000619952 NISCHQ9Y2I1 1504 aa37.02■■■■□ 3.52
KRT8-217ENST00000619952 SHROOM4Q9ULL8 1493 aa32.43■■■□□ 2.78
KRT8-217ENST00000619952 SUPT5HO00267 1087 aaKnown RBP32.1■■■□□ 2.73
KRT8-217ENST00000619952 HRCP23327 699 aa31.73■■■□□ 2.67
KRT8-217ENST00000619952 MYO15BQ96JP2 1530 aa31.62■■■□□ 2.65
KRT8-217ENST00000619952 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.62
KRT8-217ENST00000619952 CHIC1Q5VXU3 224 aa31.44■■■□□ 2.62
KRT8-217ENST00000619952 PCGF6Q9BYE7 350 aa31.32■■■□□ 2.6
KRT8-217ENST00000619952 PPARGC1BQ86YN6 1023 aaKnown RBP31.16■■■□□ 2.58
KRT8-217ENST00000619952 CCDC180Q9P1Z9 1646 aa30.99■■■□□ 2.55
KRT8-217ENST00000619952 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
KRT8-217ENST00000619952 DCAF1Q9Y4B6 1507 aa30.76■■■□□ 2.52
KRT8-217ENST00000619952 LOC105371045A0A1W2PR82 267 aa30.68■■■□□ 2.5
KRT8-217ENST00000619952 TRIM26Q12899 539 aaPredicted RBP30.39■■■□□ 2.46
KRT8-217ENST00000619952 ZEB1P37275 1124 aaPredicted RBP29.95■■■□□ 2.38
KRT8-217ENST00000619952 ABCC9O60706 1549 aa29.83■■■□□ 2.37
KRT8-217ENST00000619952 PELP1Q8IZL8 1130 aaKnown RBP29.81■■■□□ 2.36
KRT8-217ENST00000619952 SCAF1Q9H7N4 1312 aaKnown RBP29.79■■■□□ 2.36
KRT8-217ENST00000619952 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
KRT8-217ENST00000619952 FAM9AQ8IZU1 332 aaPredicted RBP29.7■■■□□ 2.34
KRT8-217ENST00000619952 RSF1Q96T23 1441 aaPredicted RBP29.64■■■□□ 2.34
KRT8-217ENST00000619952 EHMT2Q96KQ7 1210 aa29.57■■■□□ 2.32
KRT8-217ENST00000619952 RB1CC1Q8TDY2 1594 aa29.53■■■□□ 2.32
KRT8-217ENST00000619952 SCRIBQ14160 1630 aa29.46■■■□□ 2.31
KRT8-217ENST00000619952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.2■■■□□ 2.27
KRT8-217ENST00000619952 ACIN1Q9UKV3 1341 aaKnown RBP29.17■■■□□ 2.26
KRT8-217ENST00000619952 NEUROD1Q13562 356 aa29.14■■■□□ 2.26
KRT8-217ENST00000619952 CCER1Q8TC90 406 aaPredicted RBP29.1■■■□□ 2.25
KRT8-217ENST00000619952 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
KRT8-217ENST00000619952 DIEXFQ68CQ4 756 aaKnown RBP28.92■■■□□ 2.22
KRT8-217ENST00000619952 GTF3C3Q9Y5Q9 886 aa28.92■■■□□ 2.22
KRT8-217ENST00000619952 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
KRT8-217ENST00000619952 WIZO95785 1651 aa28.84■■■□□ 2.21
KRT8-217ENST00000619952 CENPBP07199 599 aaPredicted RBP28.81■■■□□ 2.2
KRT8-217ENST00000619952 TTBK1Q5TCY1 1321 aaPredicted RBP28.79■■■□□ 2.2
KRT8-217ENST00000619952 EIF4G1Q04637 1599 aaKnown RBP28.67■■■□□ 2.18
KRT8-217ENST00000619952 BAZ1AQ9NRL2 1556 aaPredicted RBP28.59■■■□□ 2.17
KRT8-217ENST00000619952 WRNQ14191 1432 aaPredicted RBP eCLIP28.58■■■□□ 2.17
KRT8-217ENST00000619952 CEP162Q5TB80 1403 aa28.53■■■□□ 2.16
KRT8-217ENST00000619952 NACADO15069 1562 aa28.51■■■□□ 2.15
KRT8-217ENST00000619952 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
KRT8-217ENST00000619952 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
KRT8-217ENST00000619952 ZNF316A6NFI3 1004 aaPredicted RBP28.47■■■□□ 2.15
KRT8-217ENST00000619952 MYT1Q01538 1121 aa28.45■■■□□ 2.14
KRT8-217ENST00000619952 YTHDC1Q96MU7 727 aaKnown RBP28.44■■■□□ 2.14
KRT8-217ENST00000619952 SOGA1O94964 1423 aa28.37■■■□□ 2.13
KRT8-217ENST00000619952 TNIKQ9UKE5 1360 aa28.34■■■□□ 2.13
KRT8-217ENST00000619952 MIER1Q8N108 512 aa28.26■■■□□ 2.11
KRT8-217ENST00000619952 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
KRT8-217ENST00000619952 UBTFP17480 764 aaKnown RBP28.24■■■□□ 2.11
KRT8-217ENST00000619952 RUSC2Q8N2Y8 1516 aa28.23■■■□□ 2.11
KRT8-217ENST00000619952 CSRNP3Q8WYN3 585 aa28.19■■■□□ 2.1
KRT8-217ENST00000619952 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
KRT8-217ENST00000619952 HNRNPUL2Q1KMD3 747 aaKnown RBP28.13■■■□□ 2.09
KRT8-217ENST00000619952 EEA1Q15075 1411 aa28.09■■■□□ 2.09
KRT8-217ENST00000619952 GOLGA3Q08378 1498 aa28.06■■■□□ 2.08
KRT8-217ENST00000619952 SMARCA4P51532 1647 aa28.06■■■□□ 2.08
KRT8-217ENST00000619952 CLIP1P30622 1438 aa27.82■■■□□ 2.04
KRT8-217ENST00000619952 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
KRT8-217ENST00000619952 VPS8Q8N3P4 1428 aa27.76■■■□□ 2.03
KRT8-217ENST00000619952 KIF21BO75037 1637 aa27.76■■■□□ 2.03
KRT8-217ENST00000619952 SYNJ1O43426 1573 aa27.71■■■□□ 2.03
KRT8-217ENST00000619952 RANGAP1P46060 587 aaPredicted RBP27.69■■■□□ 2.02
KRT8-217ENST00000619952 APLP2Q06481 763 aa27.69■■■□□ 2.02
KRT8-217ENST00000619952 UNC13AQ9UPW8 1703 aa27.68■■■□□ 2.02
KRT8-217ENST00000619952 SUPT16HQ9Y5B9 1047 aaKnown RBP27.65■■■□□ 2.02
KRT8-217ENST00000619952 RAPGEF2Q9Y4G8 1499 aa27.61■■■□□ 2.01
KRT8-217ENST00000619952 DHX57Q6P158 1386 aaKnown RBP27.56■■■□□ 2
KRT8-217ENST00000619952 BAZ1BQ9UIG0 1483 aaKnown RBP27.56■■■□□ 2
KRT8-217ENST00000619952 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
KRT8-217ENST00000619952 CLSPNQ9HAW4 1339 aa27.51■■□□□ 1.99
KRT8-217ENST00000619952 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.98
KRT8-217ENST00000619952 TSHZ2Q9NRE2 1034 aa27.4■■□□□ 1.98
KRT8-217ENST00000619952 PEG3Q9GZU2 1588 aa27.36■■□□□ 1.97
KRT8-217ENST00000619952 KANK4Q5T7N3 995 aaPredicted RBP27.35■■□□□ 1.97
KRT8-217ENST00000619952 ARAP1Q96P48 1450 aa27.3■■□□□ 1.96
KRT8-217ENST00000619952 KCNH8Q96L42 1107 aa27.27■■□□□ 1.96
KRT8-217ENST00000619952 BICRAQ9NZM4 1560 aa27.27■■□□□ 1.96
KRT8-217ENST00000619952 ANP32EQ9BTT0 268 aa27.2■■□□□ 1.95
KRT8-217ENST00000619952 RRBP1Q9P2E9 1410 aaKnown RBP27.2■■□□□ 1.94
KRT8-217ENST00000619952 TOP2BQ02880 1626 aa27.2■■□□□ 1.94
KRT8-217ENST00000619952 ATAD2BQ9ULI0 1458 aa27.17■■□□□ 1.94
KRT8-217ENST00000619952 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
KRT8-217ENST00000619952 ITGAEP38570 1179 aa27.15■■□□□ 1.94
KRT8-217ENST00000619952 BCANQ96GW7 911 aa27.15■■□□□ 1.94
KRT8-217ENST00000619952 PRXQ9BXM0 1461 aa27.14■■□□□ 1.94
KRT8-217ENST00000619952 CUX2O14529 1486 aa27.12■■□□□ 1.93
KRT8-217ENST00000619952 CCNB3Q8WWL7 1395 aa27.09■■□□□ 1.93
KRT8-217ENST00000619952 BIVM-ERCC5R4GMW8 1640 aa27.06■■□□□ 1.92
KRT8-217ENST00000619952 FKBP8Q14318 412 aa27.01■■□□□ 1.92
KRT8-217ENST00000619952 MAPKBP1O60336 1514 aa27.01■■□□□ 1.91
KRT8-217ENST00000619952 RAB3GAP2Q9H2M9 1393 aa26.99■■□□□ 1.91
KRT8-217ENST00000619952 DDX10Q13206 875 aaKnown RBP26.95■■□□□ 1.9
KRT8-217ENST00000619952 ARHGAP35Q9NRY4 1499 aa26.93■■□□□ 1.9
KRT8-217ENST00000619952 WDR97A6NE52 1622 aa26.89■■□□□ 1.89
KRT8-217ENST00000619952 SIN3AQ96ST3 1273 aa26.86■■□□□ 1.89
KRT8-217ENST00000619952 CUX1P39880 1505 aa26.85■■□□□ 1.89
KRT8-217ENST00000619952 KIF27Q86VH2 1401 aa26.85■■□□□ 1.89
KRT8-217ENST00000619952 BCL11AQ9H165 835 aa26.84■■□□□ 1.89
KRT8-217ENST00000619952 SETD5Q9C0A6 1442 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms