RNA–Protein interactions for RNA: ENST00000594581.5

STRN4-208, Transcript of striatin 4, humanhuman

TSL 2

Gene STRN4, Length 2,692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-208ENST00000594581 NISCHQ9Y2I1 1504 aa36.1■■■■□ 3.37
STRN4-208ENST00000594581 SHROOM4Q9ULL8 1493 aa31.24■■■□□ 2.59
STRN4-208ENST00000594581 SUPT5HO00267 1087 aaKnown RBP30.79■■■□□ 2.52
STRN4-208ENST00000594581 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
STRN4-208ENST00000594581 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.46
STRN4-208ENST00000594581 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
STRN4-208ENST00000594581 MYO15BQ96JP2 1530 aa30.04■■■□□ 2.4
STRN4-208ENST00000594581 CHIC1Q5VXU3 224 aa30.04■■■□□ 2.4
STRN4-208ENST00000594581 HRCP23327 699 aa29.69■■■□□ 2.34
STRN4-208ENST00000594581 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
STRN4-208ENST00000594581 PCGF6Q9BYE7 350 aa29.5■■■□□ 2.31
STRN4-208ENST00000594581 LOC105371045A0A1W2PR82 267 aa29.26■■■□□ 2.27
STRN4-208ENST00000594581 PPARGC1BQ86YN6 1023 aaKnown RBP29.15■■■□□ 2.26
STRN4-208ENST00000594581 ABCC9O60706 1549 aa28.91■■■□□ 2.22
STRN4-208ENST00000594581 TRIM26Q12899 539 aaPredicted RBP28.78■■■□□ 2.2
STRN4-208ENST00000594581 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
STRN4-208ENST00000594581 SCRIBQ14160 1630 aa28.73■■■□□ 2.19
STRN4-208ENST00000594581 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
STRN4-208ENST00000594581 RB1CC1Q8TDY2 1594 aa28.51■■■□□ 2.15
STRN4-208ENST00000594581 FAM9AQ8IZU1 332 aaPredicted RBP28.47■■■□□ 2.15
STRN4-208ENST00000594581 EHMT2Q96KQ7 1210 aa28.3■■■□□ 2.12
STRN4-208ENST00000594581 CECR2Q9BXF3 1484 aa28.25■■■□□ 2.11
STRN4-208ENST00000594581 ZEB1P37275 1124 aaPredicted RBP28.22■■■□□ 2.11
STRN4-208ENST00000594581 MROH2BQ7Z745 1585 aa28.15■■■□□ 2.1
STRN4-208ENST00000594581 PELP1Q8IZL8 1130 aaKnown RBP28.09■■■□□ 2.09
STRN4-208ENST00000594581 NACADO15069 1562 aa28.07■■■□□ 2.08
STRN4-208ENST00000594581 WIZO95785 1651 aa28.01■■■□□ 2.07
STRN4-208ENST00000594581 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
STRN4-208ENST00000594581 EIF4G1Q04637 1599 aaKnown RBP27.72■■■□□ 2.03
STRN4-208ENST00000594581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.66■■■□□ 2.02
STRN4-208ENST00000594581 SCAF1Q9H7N4 1312 aaKnown RBP27.62■■■□□ 2.01
STRN4-208ENST00000594581 CCER1Q8TC90 406 aaPredicted RBP27.55■■■□□ 2
STRN4-208ENST00000594581 ABCC8Q09428 1581 aa27.55■■■□□ 2
STRN4-208ENST00000594581 CCDC88BA6NC98 1476 aa27.51■■■□□ 2
STRN4-208ENST00000594581 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
STRN4-208ENST00000594581 TTBK1Q5TCY1 1321 aaPredicted RBP27.45■■□□□ 1.99
STRN4-208ENST00000594581 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
STRN4-208ENST00000594581 SMARCA2P51531 1590 aa27.39■■□□□ 1.98
STRN4-208ENST00000594581 SOGA1O94964 1423 aa27.38■■□□□ 1.97
STRN4-208ENST00000594581 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
STRN4-208ENST00000594581 CEP162Q5TB80 1403 aa27.36■■□□□ 1.97
STRN4-208ENST00000594581 TNIKQ9UKE5 1360 aa27.27■■□□□ 1.96
STRN4-208ENST00000594581 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
STRN4-208ENST00000594581 CSRNP3Q8WYN3 585 aa27.23■■□□□ 1.95
STRN4-208ENST00000594581 UNC13AQ9UPW8 1703 aa27.2■■□□□ 1.95
STRN4-208ENST00000594581 DIEXFQ68CQ4 756 aaKnown RBP27.2■■□□□ 1.94
STRN4-208ENST00000594581 ACIN1Q9UKV3 1341 aaKnown RBP27.19■■□□□ 1.94
STRN4-208ENST00000594581 UBTFP17480 764 aaKnown RBP27.19■■□□□ 1.94
STRN4-208ENST00000594581 NEUROD1Q13562 356 aa27.18■■□□□ 1.94
STRN4-208ENST00000594581 MYT1Q01538 1121 aa27.15■■□□□ 1.94
STRN4-208ENST00000594581 EEA1Q15075 1411 aa27.13■■□□□ 1.93
STRN4-208ENST00000594581 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.921e-8■□□□□ 9.8
STRN4-208ENST00000594581 GOLGA3Q08378 1498 aa27.02■■□□□ 1.92
STRN4-208ENST00000594581 GTF3C3Q9Y5Q9 886 aa26.93■■□□□ 1.9
STRN4-208ENST00000594581 CENPBP07199 599 aaPredicted RBP26.92■■□□□ 1.9
STRN4-208ENST00000594581 ZNF316A6NFI3 1004 aaPredicted RBP26.89■■□□□ 1.89
STRN4-208ENST00000594581 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
STRN4-208ENST00000594581 SYNJ1O43426 1573 aa26.85■■□□□ 1.89
STRN4-208ENST00000594581 HNRNPUL2Q1KMD3 747 aaKnown RBP26.84■■□□□ 1.89
STRN4-208ENST00000594581 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
STRN4-208ENST00000594581 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
STRN4-208ENST00000594581 CLIP1P30622 1438 aa26.77■■□□□ 1.88
STRN4-208ENST00000594581 KIF21BO75037 1637 aa26.76■■□□□ 1.87
STRN4-208ENST00000594581 VPS8Q8N3P4 1428 aa26.68■■□□□ 1.86
STRN4-208ENST00000594581 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
STRN4-208ENST00000594581 RAPGEF2Q9Y4G8 1499 aa26.66■■□□□ 1.86
STRN4-208ENST00000594581 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
STRN4-208ENST00000594581 YTHDC1Q96MU7 727 aaKnown RBP26.65■■□□□ 1.86
STRN4-208ENST00000594581 MIER1Q8N108 512 aa26.62■■□□□ 1.85
STRN4-208ENST00000594581 APLP2Q06481 763 aa26.6■■□□□ 1.85
STRN4-208ENST00000594581 BAZ1BQ9UIG0 1483 aaKnown RBP26.6■■□□□ 1.85
STRN4-208ENST00000594581 TOP2BQ02880 1626 aa26.43■■□□□ 1.82
STRN4-208ENST00000594581 KANK4Q5T7N3 995 aaPredicted RBP26.32■■□□□ 1.8
STRN4-208ENST00000594581 ARAP1Q96P48 1450 aa26.31■■□□□ 1.8
STRN4-208ENST00000594581 PRXQ9BXM0 1461 aa26.3■■□□□ 1.8
STRN4-208ENST00000594581 BIVM-ERCC5R4GMW8 1640 aa26.29■■□□□ 1.8
STRN4-208ENST00000594581 DHX57Q6P158 1386 aaKnown RBP26.28■■□□□ 1.8
STRN4-208ENST00000594581 ERICH3Q5RHP9 1530 aa26.26■■□□□ 1.79
STRN4-208ENST00000594581 CLSPNQ9HAW4 1339 aa26.21■■□□□ 1.79
STRN4-208ENST00000594581 CUX1P39880 1505 aa26.16■■□□□ 1.78
STRN4-208ENST00000594581 RRBP1Q9P2E9 1410 aaKnown RBP26.1■■□□□ 1.77
STRN4-208ENST00000594581 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
STRN4-208ENST00000594581 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
STRN4-208ENST00000594581 ARHGAP35Q9NRY4 1499 aa26.02■■□□□ 1.76
STRN4-208ENST00000594581 ITGAEP38570 1179 aa26.02■■□□□ 1.76
STRN4-208ENST00000594581 HMGXB3Q12766 1538 aa26■■□□□ 1.75
STRN4-208ENST00000594581 CCNB3Q8WWL7 1395 aa26■■□□□ 1.75
STRN4-208ENST00000594581 CUX2O14529 1486 aa25.97■■□□□ 1.75
STRN4-208ENST00000594581 CFTRP13569 1480 aa25.95■■□□□ 1.74
STRN4-208ENST00000594581 SUPT16HQ9Y5B9 1047 aaKnown RBP25.85■■□□□ 1.73
STRN4-208ENST00000594581 RAB3GAP2Q9H2M9 1393 aa25.85■■□□□ 1.73
STRN4-208ENST00000594581 IGF1RP08069 1367 aa25.84■■□□□ 1.73
STRN4-208ENST00000594581 MAPKBP1O60336 1514 aa25.78■■□□□ 1.72
STRN4-208ENST00000594581 KCNH8Q96L42 1107 aa25.76■■□□□ 1.71
STRN4-208ENST00000594581 TIAM1Q13009 1591 aa25.75■■□□□ 1.71
STRN4-208ENST00000594581 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
STRN4-208ENST00000594581 PHLDB1Q86UU1 1377 aa25.7■■□□□ 1.7
STRN4-208ENST00000594581 SETD5Q9C0A6 1442 aa25.7■■□□□ 1.7
STRN4-208ENST00000594581 LRRC9Q6ZRR7 1453 aa25.68■■□□□ 1.7
STRN4-208ENST00000594581 MAP3K1Q13233 1512 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms