Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SNHG1-203ENST00000537024 532 ntTSL 54.92□□□□□ -1.621e-6■■□□□ 14.4
XRN2Q9H0D6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.83□□□□□ -1.641e-6■■□□□ 14.4
XRN2Q9H0D6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.655e-8■■□□□ 14.4
XRN2Q9H0D6 RBPJ-218ENST00000510778 716 ntTSL 54.68□□□□□ -1.665e-8■■□□□ 14.4
XRN2Q9H0D6 CCAR1-211ENST00000539539 3224 ntTSL 24.61□□□□□ -1.679e-12■■□□□ 14.4
XRN2Q9H0D6 CCAR1-212ENST00000540210 3415 ntTSL 1 (best)4.6□□□□□ -1.679e-12■■□□□ 14.4
XRN2Q9H0D6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.41□□□□□ -1.71e-6■■□□□ 14.4
XRN2Q9H0D6 WDR43-201ENST00000296126 787 ntTSL 54.39□□□□□ -1.713e-6■■□□□ 14.4
XRN2Q9H0D6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.29□□□□□ -1.721e-6■■□□□ 14.4
XRN2Q9H0D6 MARS-224ENST00000551805 479 ntTSL 24.25□□□□□ -1.733e-6■■□□□ 14.4
XRN2Q9H0D6 RBPJ-219ENST00000511401 577 ntTSL 53.96□□□□□ -1.785e-8■■□□□ 14.4
XRN2Q9H0D6 SNHG1-202ENST00000535689 550 ntTSL 23.55□□□□□ -1.841e-6■■□□□ 14.4
XRN2Q9H0D6 RBPJ-230ENST00000515023 388 ntTSL 53.43□□□□□ -1.865e-8■■□□□ 14.4
XRN2Q9H0D6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.36□□□□□ -1.871e-6■■□□□ 14.4
XRN2Q9H0D6 NAP1L4-205ENST00000455338 352 ntTSL 53.05□□□□□ -1.923e-6■■□□□ 14.4
XRN2Q9H0D6 RBPJ-229ENST00000514807 340 ntTSL 33.02□□□□□ -1.935e-8■■□□□ 14.4
XRN2Q9H0D6 ZNF706-214ENST00000523146 476 ntTSL 52.71□□□□□ -1.985e-14■■□□□ 14.4
XRN2Q9H0D6 C10orf10-203ENST00000496638 868 ntTSL 325.12■■□□□ 1.615e-6■■□□□ 14.4
XRN2Q9H0D6 ACTB-208ENST00000464611 715 ntTSL 58.75□□□□□ -1.017e-17■■□□□ 14.4
XRN2Q9H0D6 RER1-201ENST00000306256 695 ntTSL 524.87■■□□□ 1.573e-15■■□□□ 14.4
XRN2Q9H0D6 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.08■■□□□ 1.293e-15■■□□□ 14.4
XRN2Q9H0D6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.25■□□□□ 0.833e-15■■□□□ 14.4
XRN2Q9H0D6 RER1-208ENST00000493207 686 ntTSL 219.38■□□□□ 0.693e-15■■□□□ 14.4
XRN2Q9H0D6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.09■□□□□ 0.013e-15■■□□□ 14.4
XRN2Q9H0D6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.123e-15■■□□□ 14.4
XRN2Q9H0D6 UBALD1-207ENST00000591113 659 ntTSL 526.89■■□□□ 1.91e-6■■□□□ 14.4
XRN2Q9H0D6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.091e-16■■□□□ 14.4
XRN2Q9H0D6 CIRBP-223ENST00000589266 616 ntTSL 329.07■■■□□ 2.246e-8■■□□□ 14.4
XRN2Q9H0D6 CIRBP-219ENST00000588411 619 ntTSL 526.03■■□□□ 1.766e-8■■□□□ 14.4
XRN2Q9H0D6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.872e-7■■□□□ 14.4
XRN2Q9H0D6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.43■□□□□ 0.862e-7■■□□□ 14.4
XRN2Q9H0D6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.32■□□□□ 0.682e-7■■□□□ 14.4
XRN2Q9H0D6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.332e-7■■□□□ 14.4
XRN2Q9H0D6 SRRM2-220ENST00000574593 1440 ntTSL 318.74■□□□□ 0.594e-8■■□□□ 14.4
XRN2Q9H0D6 SUB1-207ENST00000510442 580 ntTSL 323.92■■□□□ 1.427e-10■■□□□ 14.4
XRN2Q9H0D6 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.267e-10■■□□□ 14.4
XRN2Q9H0D6 SUB1-209ENST00000511615 1658 ntTSL 1 (best)9.8□□□□□ -0.847e-10■■□□□ 14.4
XRN2Q9H0D6 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.957e-10■■□□□ 14.4
XRN2Q9H0D6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.657e-10■■□□□ 14.4
XRN2Q9H0D6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.77e-10■■□□□ 14.4
XRN2Q9H0D6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.87e-10■■□□□ 14.4
XRN2Q9H0D6 SUB1-212ENST00000513013 493 ntTSL 53.71□□□□□ -1.827e-10■■□□□ 14.4
XRN2Q9H0D6 PTOV1-202ENST00000594151 995 ntTSL 517.08■□□□□ 0.322e-9■■□□□ 14.4
XRN2Q9H0D6 PTOV1-215ENST00000600793 426 ntTSL 514.94□□□□□ -0.022e-9■■□□□ 14.4
XRN2Q9H0D6 WDR26-203ENST00000445239 784 ntTSL 57.14□□□□□ -1.272e-19■■□□□ 14.4
XRN2Q9H0D6 UBE2D3-214ENST00000503282 584 ntTSL 225.63■■□□□ 1.692e-17■■□□□ 14.3
XRN2Q9H0D6 UBE2D3-229ENST00000510129 582 ntTSL 325.15■■□□□ 1.622e-17■■□□□ 14.3
XRN2Q9H0D6 UBE2D3-220ENST00000505307 743 ntTSL 524.12■■□□□ 1.452e-17■■□□□ 14.3
XRN2Q9H0D6 UBE2D3-228ENST00000508974 568 ntTSL 417.67■□□□□ 0.422e-17■■□□□ 14.3
XRN2Q9H0D6 SH3BP2-214ENST00000509677 1087 ntTSL 321.08■□□□□ 0.974e-9■■□□□ 14.3
XRN2Q9H0D6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.012e-7■■□□□ 14.3
XRN2Q9H0D6 SEPT9-245ENST00000592481 1291 ntTSL 523.24■■□□□ 1.312e-6■■□□□ 14.3
XRN2Q9H0D6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.032e-6■■□□□ 14.3
XRN2Q9H0D6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.112e-6■■□□□ 14.3
XRN2Q9H0D6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.12e-6■■□□□ 14.3
XRN2Q9H0D6 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.61e-7■■□□□ 14.3
XRN2Q9H0D6 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC9.32□□□□□ -0.921e-7■■□□□ 14.3
XRN2Q9H0D6 ASGR2-206ENST00000576487 1055 ntTSL 1 (best)18.04■□□□□ 0.481e-7■■□□□ 14.3
XRN2Q9H0D6 ASGR2-205ENST00000574868 1202 ntTSL 516.95■□□□□ 0.31e-7■■□□□ 14.3
XRN2Q9H0D6 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.211e-7■■□□□ 14.3
XRN2Q9H0D6 ASGR2-204ENST00000450034 932 ntTSL 216.29■□□□□ 0.21e-7■■□□□ 14.3
XRN2Q9H0D6 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.061e-7■■□□□ 14.3
XRN2Q9H0D6 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC14.67□□□□□ -0.061e-7■■□□□ 14.3
XRN2Q9H0D6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.939e-7■■□□□ 14.3
XRN2Q9H0D6 GAK-209ENST00000507580 468 ntTSL 425.25■■□□□ 1.634e-6■■□□□ 14.3
XRN2Q9H0D6 GAK-207ENST00000505819 1326 ntTSL 524.01■■□□□ 1.434e-6■■□□□ 14.3
XRN2Q9H0D6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.44■□□□□ 0.863e-6■■□□□ 14.3
XRN2Q9H0D6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.033e-6■■□□□ 14.3
XRN2Q9H0D6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.52□□□□□ -0.093e-6■■□□□ 14.3
XRN2Q9H0D6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.383e-7■■□□□ 14.3
XRN2Q9H0D6 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.153e-6■■□□□ 14.3
XRN2Q9H0D6 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.26■□□□□ 0.351e-323■■□□□ 14.3
XRN2Q9H0D6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.2■□□□□ 0.021e-323■■□□□ 14.3
XRN2Q9H0D6 GAK-219ENST00000512325 577 ntTSL 325.25■■□□□ 1.634e-6■■□□□ 14.3
XRN2Q9H0D6 GAK-202ENST00000502656 554 ntTSL 422.78■■□□□ 1.244e-6■■□□□ 14.3
XRN2Q9H0D6 ENO1-204ENST00000489867 732 ntTSL 1 (best)18.65■□□□□ 0.583e-7■■□□□ 14.3
XRN2Q9H0D6 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.363e-7■■□□□ 14.3
XRN2Q9H0D6 GAK-212ENST00000510022 618 ntTSL 410.12□□□□□ -0.794e-6■■□□□ 14.3
XRN2Q9H0D6 ENO1-205ENST00000492343 826 ntTSL 1 (best)9.59□□□□□ -0.873e-7■■□□□ 14.3
XRN2Q9H0D6 ENO1-203ENST00000486051 536 ntTSL 37.86□□□□□ -1.153e-7■■□□□ 14.3
XRN2Q9H0D6 GAK-215ENST00000511229 568 ntTSL 36.71□□□□□ -1.344e-6■■□□□ 14.3
XRN2Q9H0D6 PKP4-209ENST00000479398 550 ntTSL 524.37■■□□□ 1.494e-7■■□□□ 14.3
XRN2Q9H0D6 PKP4-203ENST00000411900 552 ntTSL 412.05□□□□□ -0.484e-7■■□□□ 14.3
XRN2Q9H0D6 PKP4-206ENST00000452162 2359 ntTSL 1 (best)11.81□□□□□ -0.524e-7■■□□□ 14.3
XRN2Q9H0D6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.82e-6■■□□□ 14.3
XRN2Q9H0D6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.172e-6■■□□□ 14.3
XRN2Q9H0D6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.892e-6■■□□□ 14.3
XRN2Q9H0D6 NEU4-206ENST00000415936 860 ntTSL 322.22■■□□□ 1.153e-6■■□□□ 14.3
XRN2Q9H0D6 NEU4-208ENST00000423583 753 ntTSL 520.73■□□□□ 0.913e-6■■□□□ 14.3
XRN2Q9H0D6 TNRC18-204ENST00000413081 925 ntTSL 323.32■■□□□ 1.321e-6■■□□□ 14.3
XRN2Q9H0D6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.757e-7■■□□□ 14.3
XRN2Q9H0D6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.147e-7■■□□□ 14.3
XRN2Q9H0D6 ARFGAP1-213ENST00000520022 558 ntTSL 421.06■□□□□ 0.964e-8■■□□□ 14.3
XRN2Q9H0D6 SCARNA17-201ENST00000516183 144 ntBASIC-0.47□□□□□ -2.481e-323■■□□□ 14.3
XRN2Q9H0D6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.925e-7■■□□□ 14.3
XRN2Q9H0D6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.512e-6■■□□□ 14.3
XRN2Q9H0D6 RABL6-210ENST00000484471 2746 ntTSL 519.12■□□□□ 0.652e-6■■□□□ 14.3
XRN2Q9H0D6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.312e-6■■□□□ 14.3
XRN2Q9H0D6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.32e-6■■□□□ 14.3
XRN2Q9H0D6 NOC2L-205ENST00000487214 865 ntTSL 322.87■■□□□ 1.251e-6■■□□□ 14.2
Retrieved 100 of 21,068 protein–RNA pairs in 92.8 ms