RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 NISCHQ9Y2I1 1504 aa30.42■■■□□ 2.46
SAFB2-201ENST00000252542 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
SAFB2-201ENST00000252542 SHROOM4Q9ULL8 1493 aa27.22■■□□□ 1.95
SAFB2-201ENST00000252542 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
SAFB2-201ENST00000252542 ZCCHC6Q5VYS8 1495 aaKnown RBP25.51■■□□□ 1.67
SAFB2-201ENST00000252542 CCDC180Q9P1Z9 1646 aa25.32■■□□□ 1.64
SAFB2-201ENST00000252542 EHMT2Q96KQ7 1210 aa25.22■■□□□ 1.63
SAFB2-201ENST00000252542 ABCC9O60706 1549 aa25.12■■□□□ 1.61
SAFB2-201ENST00000252542 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
SAFB2-201ENST00000252542 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
SAFB2-201ENST00000252542 LOC105371045A0A1W2PR82 267 aa24.87■■□□□ 1.57
SAFB2-201ENST00000252542 SCRIBQ14160 1630 aa24.71■■□□□ 1.55
SAFB2-201ENST00000252542 PCGF6Q9BYE7 350 aa24.68■■□□□ 1.54
SAFB2-201ENST00000252542 MYO15BQ96JP2 1530 aa24.65■■□□□ 1.54
SAFB2-201ENST00000252542 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
SAFB2-201ENST00000252542 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.51e-7■■■□□ 15.3
SAFB2-201ENST00000252542 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
SAFB2-201ENST00000252542 PPARGC1BQ86YN6 1023 aaKnown RBP24.28■■□□□ 1.48
SAFB2-201ENST00000252542 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
SAFB2-201ENST00000252542 TTBK1Q5TCY1 1321 aaPredicted RBP24.22■■□□□ 1.47
SAFB2-201ENST00000252542 CECR2Q9BXF3 1484 aa24.18■■□□□ 1.46
SAFB2-201ENST00000252542 HRCP23327 699 aa24.11■■□□□ 1.45
SAFB2-201ENST00000252542 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
SAFB2-201ENST00000252542 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.42
SAFB2-201ENST00000252542 MROH2BQ7Z745 1585 aa23.87■■□□□ 1.41
SAFB2-201ENST00000252542 NACADO15069 1562 aa23.86■■□□□ 1.41
SAFB2-201ENST00000252542 TRIM26Q12899 539 aaPredicted RBP23.72■■□□□ 1.39
SAFB2-201ENST00000252542 UBTFP17480 764 aaKnown RBP23.68■■□□□ 1.38
SAFB2-201ENST00000252542 WIZO95785 1651 aa23.66■■□□□ 1.38
SAFB2-201ENST00000252542 BAZ1AQ9NRL2 1556 aaPredicted RBP23.36■■□□□ 1.33
SAFB2-201ENST00000252542 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
SAFB2-201ENST00000252542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.35■■□□□ 1.33
SAFB2-201ENST00000252542 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
SAFB2-201ENST00000252542 CCER1Q8TC90 406 aaPredicted RBP23.27■■□□□ 1.32
SAFB2-201ENST00000252542 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
SAFB2-201ENST00000252542 SOGA1O94964 1423 aa23.21■■□□□ 1.31
SAFB2-201ENST00000252542 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
SAFB2-201ENST00000252542 HNRNPUL2Q1KMD3 747 aaKnown RBP23.09■■□□□ 1.29
SAFB2-201ENST00000252542 APLP2Q06481 763 aa23.09■■□□□ 1.29
SAFB2-201ENST00000252542 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
SAFB2-201ENST00000252542 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
SAFB2-201ENST00000252542 BAZ1BQ9UIG0 1483 aaKnown RBP22.96■■□□□ 1.27
SAFB2-201ENST00000252542 ATP1B4Q9UN42 357 aaPredicted RBP22.95■■□□□ 1.27
SAFB2-201ENST00000252542 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
SAFB2-201ENST00000252542 WRNQ14191 1432 aaPredicted RBP eCLIP22.95■■□□□ 1.26
SAFB2-201ENST00000252542 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
SAFB2-201ENST00000252542 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
SAFB2-201ENST00000252542 BICRAQ9NZM4 1560 aa22.91■■□□□ 1.26
SAFB2-201ENST00000252542 CEP162Q5TB80 1403 aa22.88■■□□□ 1.25
SAFB2-201ENST00000252542 ITGAEP38570 1179 aa22.86■■□□□ 1.25
SAFB2-201ENST00000252542 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
SAFB2-201ENST00000252542 P3H3Q8IVL6 736 aa22.73■■□□□ 1.23
SAFB2-201ENST00000252542 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
SAFB2-201ENST00000252542 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
SAFB2-201ENST00000252542 TNIKQ9UKE5 1360 aa22.66■■□□□ 1.22
SAFB2-201ENST00000252542 CLIP1P30622 1438 aa22.61■■□□□ 1.21
SAFB2-201ENST00000252542 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
SAFB2-201ENST00000252542 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
SAFB2-201ENST00000252542 RAPGEF2Q9Y4G8 1499 aa22.53■■□□□ 1.2
SAFB2-201ENST00000252542 YTHDC1Q96MU7 727 aaKnown RBP22.52■■□□□ 1.2
SAFB2-201ENST00000252542 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
SAFB2-201ENST00000252542 EEA1Q15075 1411 aa22.48■■□□□ 1.19
SAFB2-201ENST00000252542 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
SAFB2-201ENST00000252542 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
SAFB2-201ENST00000252542 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
SAFB2-201ENST00000252542 KANK4Q5T7N3 995 aaPredicted RBP22.4■■□□□ 1.18
SAFB2-201ENST00000252542 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
SAFB2-201ENST00000252542 FAM50AQ14320 339 aaKnown RBP22.34■■□□□ 1.17
SAFB2-201ENST00000252542 NEUROD1Q13562 356 aa22.29■■□□□ 1.16
SAFB2-201ENST00000252542 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
SAFB2-201ENST00000252542 CUX2O14529 1486 aa22.27■■□□□ 1.16
SAFB2-201ENST00000252542 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
SAFB2-201ENST00000252542 ACIN1Q9UKV3 1341 aaKnown RBP22.25■■□□□ 1.15
SAFB2-201ENST00000252542 GTF3C3Q9Y5Q9 886 aa22.24■■□□□ 1.15
SAFB2-201ENST00000252542 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
SAFB2-201ENST00000252542 VPS8Q8N3P4 1428 aa22.21■■□□□ 1.15
SAFB2-201ENST00000252542 CADPSQ9ULU8 1353 aa22.19■■□□□ 1.14
SAFB2-201ENST00000252542 CENPBP07199 599 aaPredicted RBP22.18■■□□□ 1.14
SAFB2-201ENST00000252542 CUX1P39880 1505 aa22.15■■□□□ 1.14
SAFB2-201ENST00000252542 ZNF316A6NFI3 1004 aaPredicted RBP22.14■■□□□ 1.13
SAFB2-201ENST00000252542 NESP48681 1621 aa22.13■■□□□ 1.13
SAFB2-201ENST00000252542 CARMIL1Q5VZK9 1371 aa22.11■■□□□ 1.13
SAFB2-201ENST00000252542 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.13
SAFB2-201ENST00000252542 CFTRP13569 1480 aa22.08■■□□□ 1.12
SAFB2-201ENST00000252542 RAD54L2Q9Y4B4 1467 aa22.06■■□□□ 1.12
SAFB2-201ENST00000252542 FBLN2P98095 1184 aa22.05■■□□□ 1.12
SAFB2-201ENST00000252542 KIF21BO75037 1637 aa22.04■■□□□ 1.12
SAFB2-201ENST00000252542 IGF1RP08069 1367 aa22.04■■□□□ 1.12
SAFB2-201ENST00000252542 TOP2BQ02880 1626 aa22.04■■□□□ 1.12
SAFB2-201ENST00000252542 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
SAFB2-201ENST00000252542 FGD5Q6ZNL6 1462 aa22■■□□□ 1.11
SAFB2-201ENST00000252542 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
SAFB2-201ENST00000252542 FANCD2Q9BXW9 1451 aa21.98■■□□□ 1.11
SAFB2-201ENST00000252542 MIER1Q8N108 512 aa21.98■■□□□ 1.11
SAFB2-201ENST00000252542 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
SAFB2-201ENST00000252542 HIRIP3Q9BW71 556 aaPredicted RBP21.95■■□□□ 1.1
SAFB2-201ENST00000252542 PRXQ9BXM0 1461 aa21.94■■□□□ 1.1
SAFB2-201ENST00000252542 CHIC2Q9UKJ5 165 aa21.89■■□□□ 1.09
SAFB2-201ENST00000252542 FHOD3Q2V2M9 1422 aa21.88■■□□□ 1.09
SAFB2-201ENST00000252542 SIN3AQ96ST3 1273 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms