RNA–Protein interactions for RNA: ENST00000539539.5

CCAR1-211, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 2

Gene CCAR1, Length 3,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-211ENST00000539539 NISCHQ9Y2I1 1504 aa9.97□□□□□ -0.81
CCAR1-211ENST00000539539 CCDC180Q9P1Z9 1646 aa8.93□□□□□ -0.98
CCAR1-211ENST00000539539 DCAF1Q9Y4B6 1507 aa8.43□□□□□ -1.06
CCAR1-211ENST00000539539 MYO15BQ96JP2 1530 aa8.41□□□□□ -1.06
CCAR1-211ENST00000539539 ZCCHC6Q5VYS8 1495 aaKnown RBP8.38□□□□□ -1.07
CCAR1-211ENST00000539539 NACADO15069 1562 aa8.27□□□□□ -1.09
CCAR1-211ENST00000539539 RB1CC1Q8TDY2 1594 aa8.18□□□□□ -1.1
CCAR1-211ENST00000539539 ABCC9O60706 1549 aa8.13□□□□□ -1.11
CCAR1-211ENST00000539539 SHROOM4Q9ULL8 1493 aa8.03□□□□□ -1.12
CCAR1-211ENST00000539539 UNC13AQ9UPW8 1703 aa7.99□□□□□ -1.13
CCAR1-211ENST00000539539 SCRIBQ14160 1630 aa7.9□□□□□ -1.14
CCAR1-211ENST00000539539 BICRAQ9NZM4 1560 aa7.87□□□□□ -1.15
CCAR1-211ENST00000539539 DCAF8L2P0C7V8 631 aa7.82□□□□□ -1.16
CCAR1-211ENST00000539539 BAZ1AQ9NRL2 1556 aaPredicted RBP7.74□□□□□ -1.17
CCAR1-211ENST00000539539 PEG3Q9GZU2 1588 aa7.73□□□□□ -1.17
CCAR1-211ENST00000539539 SMARCA4P51532 1647 aa7.7□□□□□ -1.18
CCAR1-211ENST00000539539 SMARCA2P51531 1590 aa7.65□□□□□ -1.19
CCAR1-211ENST00000539539 AEBP2Q6ZN18 517 aaPredicted RBP7.62□□□□□ -1.19
CCAR1-211ENST00000539539 EIF4G1Q04637 1599 aaKnown RBP7.62□□□□□ -1.19
CCAR1-211ENST00000539539 HMGXB3Q12766 1538 aa7.61□□□□□ -1.19
CCAR1-211ENST00000539539 RSF1Q96T23 1441 aaPredicted RBP7.61□□□□□ -1.19
CCAR1-211ENST00000539539 MROH2BQ7Z745 1585 aa7.6□□□□□ -1.19
CCAR1-211ENST00000539539 CECR2Q9BXF3 1484 aa7.59□□□□□ -1.19
CCAR1-211ENST00000539539 TOP2AP11388 1531 aaKnown RBP7.59□□□□□ -1.2
CCAR1-211ENST00000539539 NCAPD3P42695 1498 aa7.56□□□□□ -1.2
CCAR1-211ENST00000539539 WIZO95785 1651 aa7.54□□□□□ -1.2
CCAR1-211ENST00000539539 ATAD2BQ9ULI0 1458 aa7.54□□□□□ -1.2
CCAR1-211ENST00000539539 PABPN1Q86U42 306 aaKnown RBP eCLIP7.53□□□□□ -1.2
CCAR1-211ENST00000539539 CC2D2AQ9P2K1 1620 aa7.51□□□□□ -1.21
CCAR1-211ENST00000539539 PRDM2Q13029 1718 aa7.49□□□□□ -1.21
CCAR1-211ENST00000539539 BAZ1BQ9UIG0 1483 aaKnown RBP7.48□□□□□ -1.21
CCAR1-211ENST00000539539 CCDC88BA6NC98 1476 aa7.39□□□□□ -1.23
CCAR1-211ENST00000539539 LAMC3Q9Y6N6 1575 aa7.36□□□□□ -1.23
CCAR1-211ENST00000539539 CFTRP13569 1480 aa7.33□□□□□ -1.24
CCAR1-211ENST00000539539 SUPT5HO00267 1087 aaKnown RBP7.33□□□□□ -1.24
CCAR1-211ENST00000539539 CHIC1Q5VXU3 224 aa7.29□□□□□ -1.24
CCAR1-211ENST00000539539 BIVM-ERCC5R4GMW8 1640 aa7.28□□□□□ -1.24
CCAR1-211ENST00000539539 CADPSQ9ULU8 1353 aa7.28□□□□□ -1.24
CCAR1-211ENST00000539539 ABCC8Q09428 1581 aa7.27□□□□□ -1.25
CCAR1-211ENST00000539539 WDR97A6NE52 1622 aa7.23□□□□□ -1.25
CCAR1-211ENST00000539539 TOP2BQ02880 1626 aa7.23□□□□□ -1.25
CCAR1-211ENST00000539539 PDS5BQ9NTI5 1447 aa7.22□□□□□ -1.25
CCAR1-211ENST00000539539 DNMBPQ6XZF7 1577 aa7.21□□□□□ -1.26
CCAR1-211ENST00000539539 KIF21AQ7Z4S6 1674 aa7.19□□□□□ -1.26
CCAR1-211ENST00000539539 FANCD2Q9BXW9 1451 aa7.18□□□□□ -1.26
CCAR1-211ENST00000539539 CEP164Q9UPV0 1460 aa7.18□□□□□ -1.26
CCAR1-211ENST00000539539 PELP1Q8IZL8 1130 aaKnown RBP7.18□□□□□ -1.26
CCAR1-211ENST00000539539 EEA1Q15075 1411 aa7.17□□□□□ -1.26
CCAR1-211ENST00000539539 WRNQ14191 1432 aaPredicted RBP eCLIP7.17□□□□□ -1.26
CCAR1-211ENST00000539539 WDR62O43379 1518 aa7.16□□□□□ -1.26
CCAR1-211ENST00000539539 SYNJ1O43426 1573 aa7.15□□□□□ -1.26
CCAR1-211ENST00000539539 MRC2Q9UBG0 1479 aa7.15□□□□□ -1.26
CCAR1-211ENST00000539539 THOC2Q8NI27 1593 aaKnown RBP7.15□□□□□ -1.27
CCAR1-211ENST00000539539 CUX1P39880 1505 aa7.15□□□□□ -1.27
CCAR1-211ENST00000539539 DNAJC5BQ9UF47 199 aa7.14□□□□□ -1.27
CCAR1-211ENST00000539539 TOPBP1Q92547 1522 aa7.12□□□□□ -1.27
CCAR1-211ENST00000539539 NESP48681 1621 aa7.11□□□□□ -1.27
CCAR1-211ENST00000539539 URB2Q14146 1524 aaKnown RBP7.1□□□□□ -1.27
CCAR1-211ENST00000539539 ABCA10Q8WWZ4 1543 aa7.09□□□□□ -1.27
CCAR1-211ENST00000539539 TARBP1Q13395 1621 aaKnown RBP7.08□□□□□ -1.28
CCAR1-211ENST00000539539 KIF21BO75037 1637 aa7.07□□□□□ -1.28
CCAR1-211ENST00000539539 IFT140Q96RY7 1462 aa7.07□□□□□ -1.28
CCAR1-211ENST00000539539 ABCA5Q8WWZ7 1642 aa7.07□□□□□ -1.28
CCAR1-211ENST00000539539 CUL7Q14999 1698 aa7.07□□□□□ -1.28
CCAR1-211ENST00000539539 CUX2O14529 1486 aa7.06□□□□□ -1.28
CCAR1-211ENST00000539539 FGD5Q6ZNL6 1462 aa7.06□□□□□ -1.28
CCAR1-211ENST00000539539 ERICH3Q5RHP9 1530 aa7.05□□□□□ -1.28
CCAR1-211ENST00000539539 POLA1P09884 1462 aaPredicted RBP7.05□□□□□ -1.28
CCAR1-211ENST00000539539 HRCP23327 699 aa7.04□□□□□ -1.28
CCAR1-211ENST00000539539 TRIM41Q8WV44 630 aa7.04□□□□□ -1.28
CCAR1-211ENST00000539539 ERCC6Q03468 1493 aa7.04□□□□□ -1.28
CCAR1-211ENST00000539539 PBRM1Q86U86 1689 aa7.03□□□□□ -1.28
CCAR1-211ENST00000539539 KIF27Q86VH2 1401 aa7.03□□□□□ -1.28
CCAR1-211ENST00000539539 POTEDQ86YR6 584 aa7.02□□□□□ -1.29
CCAR1-211ENST00000539539 SOGA1O94964 1423 aa7□□□□□ -1.29
CCAR1-211ENST00000539539 PRXQ9BXM0 1461 aa6.98□□□□□ -1.29
CCAR1-211ENST00000539539 MYT1Q01538 1121 aa6.98□□□□□ -1.29
CCAR1-211ENST00000539539 ADAMTS12P58397 1594 aa6.97□□□□□ -1.29
CCAR1-211ENST00000539539 MAGI1Q96QZ7 1491 aaPredicted RBP6.96□□□□□ -1.29
CCAR1-211ENST00000539539 EIF4G3O43432 1585 aaKnown RBP6.96□□□□□ -1.29
CCAR1-211ENST00000539539 GOLGA3Q08378 1498 aa6.96□□□□□ -1.3
CCAR1-211ENST00000539539 GRIN2BQ13224 1484 aa6.96□□□□□ -1.3
CCAR1-211ENST00000539539 CTTNBP2Q8WZ74 1663 aa6.96□□□□□ -1.3
CCAR1-211ENST00000539539 GAPVD1Q14C86 1478 aa6.95□□□□□ -1.3
CCAR1-211ENST00000539539 RAD54L2Q9Y4B4 1467 aa6.93□□□□□ -1.3
CCAR1-211ENST00000539539 RAPGEF2Q9Y4G8 1499 aa6.93□□□□□ -1.3
CCAR1-211ENST00000539539 CSRNP3Q8WYN3 585 aa6.93□□□□□ -1.3
CCAR1-211ENST00000539539 FHAD1B1AJZ9 1412 aa6.93□□□□□ -1.3
CCAR1-211ENST00000539539 IGF1RP08069 1367 aa6.93□□□□□ -1.3
CCAR1-211ENST00000539539 TNIKQ9UKE5 1360 aa6.92□□□□□ -1.3
CCAR1-211ENST00000539539 RUSC2Q8N2Y8 1516 aa6.9□□□□□ -1.31
CCAR1-211ENST00000539539 EFCAB5A4FU69 1503 aa6.9□□□□□ -1.31
CCAR1-211ENST00000539539 SYNJ2O15056 1496 aa6.89□□□□□ -1.31
CCAR1-211ENST00000539539 CARMIL1Q5VZK9 1371 aa6.88□□□□□ -1.31
CCAR1-211ENST00000539539 ZNF608Q9ULD9 1512 aaPredicted RBP6.86□□□□□ -1.31
CCAR1-211ENST00000539539 SAMD9Q5K651 1589 aa6.86□□□□□ -1.31
CCAR1-211ENST00000539539 SNAPC4Q5SXM2 1469 aa6.86□□□□□ -1.31
CCAR1-211ENST00000539539 GRIN2AQ12879 1464 aa6.85□□□□□ -1.31
CCAR1-211ENST00000539539 NUP160Q12769 1436 aa6.85□□□□□ -1.31
CCAR1-211ENST00000539539 UGGT2Q9NYU1 1516 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms