RNA–Protein interactions for RNA: ENST00000513013.5

SUB1-212, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 5

Gene SUB1, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-212ENST00000513013 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
SUB1-212ENST00000513013 CHIC1Q5VXU3 224 aa17.72■□□□□ 0.43
SUB1-212ENST00000513013 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
SUB1-212ENST00000513013 PHF23Q9BUL5 403 aaPredicted RBP15.67■□□□□ 0.1
SUB1-212ENST00000513013 FOXD1Q16676 465 aa14.74□□□□□ -0.05
SUB1-212ENST00000513013 PLPPR3Q6T4P5 718 aa14.25□□□□□ -0.13
SUB1-212ENST00000513013 MSH5O43196 834 aa13.92□□□□□ -0.18
SUB1-212ENST00000513013 PIAS4Q8N2W9 510 aaPredicted RBP13.84□□□□□ -0.19
SUB1-212ENST00000513013 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
SUB1-212ENST00000513013 ADRA2BP18089 450 aa13.75□□□□□ -0.21
SUB1-212ENST00000513013 POTEDQ86YR6 584 aa13.38□□□□□ -0.27
SUB1-212ENST00000513013 SCAF1Q9H7N4 1312 aaKnown RBP12.8□□□□□ -0.36
SUB1-212ENST00000513013 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
SUB1-212ENST00000513013 MAPK8IP2Q13387 824 aaPredicted RBP12.59□□□□□ -0.39
SUB1-212ENST00000513013 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
SUB1-212ENST00000513013 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
SUB1-212ENST00000513013 HOXD11P31277 338 aaPredicted RBP12.16□□□□□ -0.46
SUB1-212ENST00000513013 DCAF8L1A6NGE4 600 aa12.11□□□□□ -0.47
SUB1-212ENST00000513013 RNF216Q9NWF9 866 aaPredicted RBP12.11□□□□□ -0.47
SUB1-212ENST00000513013 NCBP3Q53F19 620 aaKnown RBP12.1□□□□□ -0.47
SUB1-212ENST00000513013 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
SUB1-212ENST00000513013 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
SUB1-212ENST00000513013 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
SUB1-212ENST00000513013 NPM3O75607 178 aaKnown RBP11.77□□□□□ -0.53
SUB1-212ENST00000513013 C1QBPQ07021 282 aaKnown RBP11.71□□□□□ -0.53
SUB1-212ENST00000513013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.64□□□□□ -0.55
SUB1-212ENST00000513013 KCNA4P22459 653 aa11.55□□□□□ -0.56
SUB1-212ENST00000513013 U3KPZ7 1027 aaPredicted RBP11.3□□□□□ -0.6
SUB1-212ENST00000513013 APLP2Q06481 763 aa11.23□□□□□ -0.61
SUB1-212ENST00000513013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.19□□□□□ -0.62
SUB1-212ENST00000513013 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
SUB1-212ENST00000513013 HNRNPUL2Q1KMD3 747 aaKnown RBP11.19□□□□□ -0.62
SUB1-212ENST00000513013 CAPN15O75808 1086 aa11.17□□□□□ -0.62
SUB1-212ENST00000513013 SPINK5Q9NQ38 1064 aaPredicted RBP11.1□□□□□ -0.63
SUB1-212ENST00000513013 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
SUB1-212ENST00000513013 DSG3P32926 999 aa11.05□□□□□ -0.64
SUB1-212ENST00000513013 ZNF219Q9P2Y4 722 aaPredicted RBP11.05□□□□□ -0.64
SUB1-212ENST00000513013 SLC4A1APQ9BWU0 796 aaKnown RBP11□□□□□ -0.65
SUB1-212ENST00000513013 TRHP20396 242 aaPredicted RBP10.98□□□□□ -0.65
SUB1-212ENST00000513013 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
SUB1-212ENST00000513013 FOXD4L1Q9NU39 408 aa10.86□□□□□ -0.67
SUB1-212ENST00000513013 ABCB7O75027 752 aa10.84□□□□□ -0.67
SUB1-212ENST00000513013 POLA2Q14181 598 aa10.7□□□□□ -0.7
SUB1-212ENST00000513013 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
SUB1-212ENST00000513013 ZBTB12Q9Y330 459 aaPredicted RBP10.63□□□□□ -0.71
SUB1-212ENST00000513013 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
SUB1-212ENST00000513013 ZBTB22O15209 634 aa10.56□□□□□ -0.72
SUB1-212ENST00000513013 ATF5Q9Y2D1 282 aaPredicted RBP10.55□□□□□ -0.72
SUB1-212ENST00000513013 POTEHQ6S545 545 aa10.53□□□□□ -0.72
SUB1-212ENST00000513013 AKT1S1Q96B36 256 aa10.4□□□□□ -0.74
SUB1-212ENST00000513013 FBLN2P98095 1184 aa10.35□□□□□ -0.75
SUB1-212ENST00000513013 CHRDL2Q6WN34 429 aa10.33□□□□□ -0.76
SUB1-212ENST00000513013 OSCARQ8IYS5 282 aa10.32□□□□□ -0.76
SUB1-212ENST00000513013 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
SUB1-212ENST00000513013 SPDYE2BA6NHP3 402 aa10.23□□□□□ -0.77
SUB1-212ENST00000513013 SPDYE6P0CI01 402 aa10.23□□□□□ -0.77
SUB1-212ENST00000513013 SPDYE2Q495Y8 402 aa10.23□□□□□ -0.77
SUB1-212ENST00000513013 CSRNP3Q8WYN3 585 aa10.17□□□□□ -0.78
SUB1-212ENST00000513013 PITPNM1O00562 1244 aa10.1□□□□□ -0.79
SUB1-212ENST00000513013 ZNF692Q9BU19 519 aaPredicted RBP10.1□□□□□ -0.79
SUB1-212ENST00000513013 MKRN4PQ13434 485 aaPredicted RBP10.09□□□□□ -0.79
SUB1-212ENST00000513013 EHMT2Q96KQ7 1210 aa10.08□□□□□ -0.8
SUB1-212ENST00000513013 PIP4P2Q8N4L2 257 aa10.06□□□□□ -0.8
SUB1-212ENST00000513013 SPDYE1Q8NFV5 336 aaPredicted RBP10.05□□□□□ -0.8
SUB1-212ENST00000513013 SSUH2Q9Y2M2 353 aa10.04□□□□□ -0.8
SUB1-212ENST00000513013 FXR2P51116 673 aaKnown RBP eCLIP10.03□□□□□ -0.8
SUB1-212ENST00000513013 CLEC11AQ9Y240 323 aa9.98□□□□□ -0.81
SUB1-212ENST00000513013 HAX1O00165 279 aa9.92□□□□□ -0.82
SUB1-212ENST00000513013 PABPN1Q86U42 306 aaKnown RBP eCLIP9.91□□□□□ -0.82
SUB1-212ENST00000513013 SP7Q8TDD2 431 aaPredicted RBP9.9□□□□□ -0.82
SUB1-212ENST00000513013 PRKAR2AP13861 404 aaKnown RBP9.87□□□□□ -0.83
SUB1-212ENST00000513013 PRR29P0C7W0 189 aa9.86□□□□□ -0.83
SUB1-212ENST00000513013 STAG3Q9UJ98 1225 aa9.77□□□□□ -0.85
SUB1-212ENST00000513013 SPDYE4A6NLX3 237 aa9.74□□□□□ -0.85
SUB1-212ENST00000513013 C19orf67A6NJJ6 358 aa9.7□□□□□ -0.86
SUB1-212ENST00000513013 CHADLQ6NUI6 762 aa9.7□□□□□ -0.86
SUB1-212ENST00000513013 EVX2Q03828 476 aa9.65□□□□□ -0.86
SUB1-212ENST00000513013 FARP1Q9Y4F1 1045 aaPredicted RBP9.65□□□□□ -0.86
SUB1-212ENST00000513013 CLCN6P51797 869 aa9.6□□□□□ -0.87
SUB1-212ENST00000513013 CD44P16070 742 aaKnown RBP9.58□□□□□ -0.88
SUB1-212ENST00000513013 GABBR2O75899 941 aa9.54□□□□□ -0.88
SUB1-212ENST00000513013 CREBZFQ9NS37 354 aa9.54□□□□□ -0.88
SUB1-212ENST00000513013 NPM1P06748 294 aaKnown RBP eCLIP9.51□□□□□ -0.89
SUB1-212ENST00000513013 PAK3O75914 559 aaPredicted RBP9.49□□□□□ -0.89
SUB1-212ENST00000513013 PROM2Q8N271 834 aa9.48□□□□□ -0.89
SUB1-212ENST00000513013 ZRANB1Q9UGI0 708 aa9.45□□□□□ -0.9
SUB1-212ENST00000513013 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
SUB1-212ENST00000513013 ZNF579Q8NAF0 562 aaKnown RBP9.43□□□□□ -0.9
SUB1-212ENST00000513013 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
SUB1-212ENST00000513013 MNX1P50219 401 aaPredicted RBP9.35□□□□□ -0.91
SUB1-212ENST00000513013 MIER1Q8N108 512 aa9.32□□□□□ -0.92
SUB1-212ENST00000513013 LHX8Q68G74 356 aa9.3□□□□□ -0.92
SUB1-212ENST00000513013 ZBTB47Q9UFB7 747 aaPredicted RBP9.29□□□□□ -0.92
SUB1-212ENST00000513013 FKBP8Q14318 412 aa9.27□□□□□ -0.93
SUB1-212ENST00000513013 PLCD3Q8N3E9 789 aa9.27□□□□□ -0.93
SUB1-212ENST00000513013 POTEIP0CG38 1075 aa9.26□□□□□ -0.93
SUB1-212ENST00000513013 PHF12Q96QT6 1004 aa9.25□□□□□ -0.93
SUB1-212ENST00000513013 GALR2O43603 387 aaPredicted RBP9.24□□□□□ -0.93
SUB1-212ENST00000513013 TSPYL2Q9H2G4 693 aaPredicted RBP9.23□□□□□ -0.93
SUB1-212ENST00000513013 FBXO3Q9UK99 471 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms