RNA–Protein interactions for RNA: ENST00000540210.5

CCAR1-212, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 1 (best)

Gene CCAR1, Length 3,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-212ENST00000540210 NISCHQ9Y2I1 1504 aa9.79□□□□□ -0.84
CCAR1-212ENST00000540210 CCDC180Q9P1Z9 1646 aa8.9□□□□□ -0.98
CCAR1-212ENST00000540210 ABCC9O60706 1549 aa8.43□□□□□ -1.06
CCAR1-212ENST00000540210 MYO15BQ96JP2 1530 aa8.36□□□□□ -1.07
CCAR1-212ENST00000540210 NACADO15069 1562 aa8.31□□□□□ -1.08
CCAR1-212ENST00000540210 RB1CC1Q8TDY2 1594 aa8.3□□□□□ -1.08
CCAR1-212ENST00000540210 DCAF1Q9Y4B6 1507 aa8.27□□□□□ -1.09
CCAR1-212ENST00000540210 POTEDQ86YR6 584 aa8.19□□□□□ -1.1
CCAR1-212ENST00000540210 ZCCHC6Q5VYS8 1495 aaKnown RBP8.18□□□□□ -1.1
CCAR1-212ENST00000540210 SHROOM4Q9ULL8 1493 aa8.14□□□□□ -1.11
CCAR1-212ENST00000540210 UNC13AQ9UPW8 1703 aa8.1□□□□□ -1.11
CCAR1-212ENST00000540210 BICRAQ9NZM4 1560 aa8.02□□□□□ -1.13
CCAR1-212ENST00000540210 AEBP2Q6ZN18 517 aaPredicted RBP7.95□□□□□ -1.14
CCAR1-212ENST00000540210 SCRIBQ14160 1630 aa7.87□□□□□ -1.15
CCAR1-212ENST00000540210 EIF4G1Q04637 1599 aaKnown RBP7.79□□□□□ -1.16
CCAR1-212ENST00000540210 DCAF8L2P0C7V8 631 aa7.78□□□□□ -1.16
CCAR1-212ENST00000540210 CC2D2AQ9P2K1 1620 aa7.75□□□□□ -1.17
CCAR1-212ENST00000540210 PABPN1Q86U42 306 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCAR1-212ENST00000540210 DNAJC5BQ9UF47 199 aa7.71□□□□□ -1.18
CCAR1-212ENST00000540210 PEG3Q9GZU2 1588 aa7.66□□□□□ -1.18
CCAR1-212ENST00000540210 CECR2Q9BXF3 1484 aa7.66□□□□□ -1.18
CCAR1-212ENST00000540210 HMGXB3Q12766 1538 aa7.64□□□□□ -1.19
CCAR1-212ENST00000540210 SMARCA4P51532 1647 aa7.63□□□□□ -1.19
CCAR1-212ENST00000540210 SMARCA2P51531 1590 aa7.62□□□□□ -1.19
CCAR1-212ENST00000540210 BAZ1AQ9NRL2 1556 aaPredicted RBP7.62□□□□□ -1.19
CCAR1-212ENST00000540210 NCAPD3P42695 1498 aa7.62□□□□□ -1.19
CCAR1-212ENST00000540210 ATAD2BQ9ULI0 1458 aa7.56□□□□□ -1.2
CCAR1-212ENST00000540210 BAZ1BQ9UIG0 1483 aaKnown RBP7.48□□□□□ -1.21
CCAR1-212ENST00000540210 MROH2BQ7Z745 1585 aa7.47□□□□□ -1.21
CCAR1-212ENST00000540210 LAMC3Q9Y6N6 1575 aa7.46□□□□□ -1.21
CCAR1-212ENST00000540210 CUX2O14529 1486 aa7.44□□□□□ -1.22
CCAR1-212ENST00000540210 CHIC1Q5VXU3 224 aa7.42□□□□□ -1.22
CCAR1-212ENST00000540210 TOP2AP11388 1531 aaKnown RBP7.41□□□□□ -1.22
CCAR1-212ENST00000540210 PRDM2Q13029 1718 aa7.4□□□□□ -1.23
CCAR1-212ENST00000540210 WIZO95785 1651 aa7.38□□□□□ -1.23
CCAR1-212ENST00000540210 THOC2Q8NI27 1593 aaKnown RBP7.37□□□□□ -1.23
CCAR1-212ENST00000540210 RSF1Q96T23 1441 aaPredicted RBP7.37□□□□□ -1.23
CCAR1-212ENST00000540210 PDS5BQ9NTI5 1447 aa7.33□□□□□ -1.24
CCAR1-212ENST00000540210 KIF21AQ7Z4S6 1674 aa7.32□□□□□ -1.24
CCAR1-212ENST00000540210 CADPSQ9ULU8 1353 aa7.32□□□□□ -1.24
CCAR1-212ENST00000540210 CFTRP13569 1480 aa7.31□□□□□ -1.24
CCAR1-212ENST00000540210 WDR62O43379 1518 aa7.31□□□□□ -1.24
CCAR1-212ENST00000540210 ERCC6Q03468 1493 aa7.31□□□□□ -1.24
CCAR1-212ENST00000540210 MRC2Q9UBG0 1479 aa7.29□□□□□ -1.24
CCAR1-212ENST00000540210 NESP48681 1621 aa7.28□□□□□ -1.24
CCAR1-212ENST00000540210 CEP164Q9UPV0 1460 aa7.25□□□□□ -1.25
CCAR1-212ENST00000540210 FANCD2Q9BXW9 1451 aa7.23□□□□□ -1.25
CCAR1-212ENST00000540210 ABCC8Q09428 1581 aa7.23□□□□□ -1.25
CCAR1-212ENST00000540210 WDR97A6NE52 1622 aa7.23□□□□□ -1.25
CCAR1-212ENST00000540210 CCDC88BA6NC98 1476 aa7.22□□□□□ -1.25
CCAR1-212ENST00000540210 DNMBPQ6XZF7 1577 aa7.18□□□□□ -1.26
CCAR1-212ENST00000540210 URB2Q14146 1524 aaKnown RBP7.17□□□□□ -1.26
CCAR1-212ENST00000540210 IFT140Q96RY7 1462 aa7.14□□□□□ -1.27
CCAR1-212ENST00000540210 TOPBP1Q92547 1522 aa7.13□□□□□ -1.27
CCAR1-212ENST00000540210 TARBP1Q13395 1621 aaKnown RBP7.11□□□□□ -1.27
CCAR1-212ENST00000540210 DNAJC5Q9H3Z4 198 aa7.1□□□□□ -1.27
CCAR1-212ENST00000540210 BIVM-ERCC5R4GMW8 1640 aa7.08□□□□□ -1.28
CCAR1-212ENST00000540210 EIF4G3O43432 1585 aaKnown RBP7.06□□□□□ -1.28
CCAR1-212ENST00000540210 POLA1P09884 1462 aaPredicted RBP7.05□□□□□ -1.28
CCAR1-212ENST00000540210 CUX1P39880 1505 aa7.04□□□□□ -1.28
CCAR1-212ENST00000540210 TOP2BQ02880 1626 aa7.03□□□□□ -1.28
CCAR1-212ENST00000540210 ABCA5Q8WWZ7 1642 aa7.02□□□□□ -1.29
CCAR1-212ENST00000540210 ABCA10Q8WWZ4 1543 aa7.02□□□□□ -1.29
CCAR1-212ENST00000540210 MAGI1Q96QZ7 1491 aaPredicted RBP7.01□□□□□ -1.29
CCAR1-212ENST00000540210 PBRM1Q86U86 1689 aa7□□□□□ -1.29
CCAR1-212ENST00000540210 FGD5Q6ZNL6 1462 aa7□□□□□ -1.29
CCAR1-212ENST00000540210 ZNF608Q9ULD9 1512 aaPredicted RBP6.98□□□□□ -1.29
CCAR1-212ENST00000540210 CHD1O14646 1710 aa6.98□□□□□ -1.29
CCAR1-212ENST00000540210 SLC24A1O60721 1099 aa6.98□□□□□ -1.29
CCAR1-212ENST00000540210 GRIN2BQ13224 1484 aa6.97□□□□□ -1.29
CCAR1-212ENST00000540210 SOGA1O94964 1423 aa6.97□□□□□ -1.29
CCAR1-212ENST00000540210 CLASP1Q7Z460 1538 aa6.97□□□□□ -1.29
CCAR1-212ENST00000540210 ERICH3Q5RHP9 1530 aa6.96□□□□□ -1.3
CCAR1-212ENST00000540210 SYNJ1O43426 1573 aa6.95□□□□□ -1.3
CCAR1-212ENST00000540210 WRNQ14191 1432 aaPredicted RBP eCLIP6.94□□□□□ -1.3
CCAR1-212ENST00000540210 ADAMTS12P58397 1594 aa6.94□□□□□ -1.3
CCAR1-212ENST00000540210 SYNJ2O15056 1496 aa6.94□□□□□ -1.3
CCAR1-212ENST00000540210 GAPVD1Q14C86 1478 aa6.92□□□□□ -1.3
CCAR1-212ENST00000540210 RAD54L2Q9Y4B4 1467 aa6.92□□□□□ -1.3
CCAR1-212ENST00000540210 SNAPC4Q5SXM2 1469 aa6.92□□□□□ -1.3
CCAR1-212ENST00000540210 RIMBP3CA6NJZ7 1639 aa6.92□□□□□ -1.3
CCAR1-212ENST00000540210 RIMBP3BA6NNM3 1639 aa6.92□□□□□ -1.3
CCAR1-212ENST00000540210 RIMBP3Q9UFD9 1639 aa6.92□□□□□ -1.3
CCAR1-212ENST00000540210 OSCARQ8IYS5 282 aa6.91□□□□□ -1.3
CCAR1-212ENST00000540210 CUL7Q14999 1698 aa6.91□□□□□ -1.3
CCAR1-212ENST00000540210 SHROOM2Q13796 1616 aa6.91□□□□□ -1.3
CCAR1-212ENST00000540210 AQRO60306 1485 aaKnown RBP eCLIP6.91□□□□□ -1.37e-7■■■■□ 24.7
CCAR1-212ENST00000540210 NUP160Q12769 1436 aa6.89□□□□□ -1.31
CCAR1-212ENST00000540210 ARHGEF11O15085 1522 aa6.89□□□□□ -1.31
CCAR1-212ENST00000540210 FHAD1B1AJZ9 1412 aa6.88□□□□□ -1.31
CCAR1-212ENST00000540210 GRIN2AQ12879 1464 aa6.87□□□□□ -1.31
CCAR1-212ENST00000540210 TDRD9Q8NDG6 1382 aaKnown RBP6.85□□□□□ -1.31
CCAR1-212ENST00000540210 SUPT5HO00267 1087 aaKnown RBP6.84□□□□□ -1.31
CCAR1-212ENST00000540210 CEP170Q5SW79 1584 aa6.84□□□□□ -1.31
CCAR1-212ENST00000540210 RUSC2Q8N2Y8 1516 aa6.84□□□□□ -1.31
CCAR1-212ENST00000540210 ARAP1Q96P48 1450 aa6.83□□□□□ -1.32
CCAR1-212ENST00000540210 KIF27Q86VH2 1401 aa6.82□□□□□ -1.32
CCAR1-212ENST00000540210 KIAA0586Q9BVV6 1533 aa6.78□□□□□ -1.32
CCAR1-212ENST00000540210 CHMP7Q8WUX9 453 aaPredicted RBP6.78□□□□□ -1.32
CCAR1-212ENST00000540210 IGF1RP08069 1367 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms