RNA–Protein interactions for RNA: ENST00000510442.1

SUB1-207, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-207ENST00000510442 NISCHQ9Y2I1 1504 aa49.24■■■■■ 5.47
SUB1-207ENST00000510442 CCDC180Q9P1Z9 1646 aa44.08■■■■■ 4.65
SUB1-207ENST00000510442 ABCC9O60706 1549 aa43.95■■■■■ 4.63
SUB1-207ENST00000510442 RB1CC1Q8TDY2 1594 aa41.91■■■■■ 4.3
SUB1-207ENST00000510442 NACADO15069 1562 aa41.67■■■■■ 4.26
SUB1-207ENST00000510442 DCAF8L2P0C7V8 631 aa41.56■■■■■ 4.24
SUB1-207ENST00000510442 MYO15BQ96JP2 1530 aa41.17■■■■■ 4.18
SUB1-207ENST00000510442 DNAJC5BQ9UF47 199 aa41.14■■■■■ 4.18
SUB1-207ENST00000510442 PABPN1Q86U42 306 aaKnown RBP eCLIP40.98■■■■■ 4.15
SUB1-207ENST00000510442 UNC13AQ9UPW8 1703 aa40.92■■■■■ 4.14
SUB1-207ENST00000510442 ZCCHC6Q5VYS8 1495 aaKnown RBP40.82■■■■■ 4.12
SUB1-207ENST00000510442 DCAF1Q9Y4B6 1507 aa40.7■■■■■ 4.11
SUB1-207ENST00000510442 BICRAQ9NZM4 1560 aa40.67■■■■■ 4.1
SUB1-207ENST00000510442 SCRIBQ14160 1630 aa40.16■■■■■ 4.02
SUB1-207ENST00000510442 SHROOM4Q9ULL8 1493 aa40.16■■■■■ 4.02
SUB1-207ENST00000510442 CC2D2AQ9P2K1 1620 aa39.7■■■■□ 3.95
SUB1-207ENST00000510442 EIF4G1Q04637 1599 aaKnown RBP39.66■■■■□ 3.94
SUB1-207ENST00000510442 CECR2Q9BXF3 1484 aa39.58■■■■□ 3.93
SUB1-207ENST00000510442 NCAPD3P42695 1498 aa38.5■■■■□ 3.75
SUB1-207ENST00000510442 ATAD2BQ9ULI0 1458 aa38.38■■■■□ 3.73
SUB1-207ENST00000510442 SMARCA4P51532 1647 aa38.35■■■■□ 3.73
SUB1-207ENST00000510442 SMARCA2P51531 1590 aa38.28■■■■□ 3.72
SUB1-207ENST00000510442 BAZ1AQ9NRL2 1556 aaPredicted RBP38.21■■■■□ 3.71
SUB1-207ENST00000510442 HMGXB3Q12766 1538 aa38.18■■■■□ 3.7
SUB1-207ENST00000510442 BAZ1BQ9UIG0 1483 aaKnown RBP38.01■■■■□ 3.67
SUB1-207ENST00000510442 PEG3Q9GZU2 1588 aa38■■■■□ 3.67
SUB1-207ENST00000510442 ERCC6Q03468 1493 aa37.94■■■■□ 3.66
SUB1-207ENST00000510442 MROH2BQ7Z745 1585 aa37.93■■■■□ 3.66
SUB1-207ENST00000510442 CUX2O14529 1486 aa37.83■■■■□ 3.65
SUB1-207ENST00000510442 NESP48681 1621 aa37.79■■■■□ 3.64
SUB1-207ENST00000510442 DNAJC5Q9H3Z4 198 aa37.69■■■■□ 3.62
SUB1-207ENST00000510442 LAMC3Q9Y6N6 1575 aa37.58■■■■□ 3.61
SUB1-207ENST00000510442 WIZO95785 1651 aa37.47■■■■□ 3.59
SUB1-207ENST00000510442 PDS5BQ9NTI5 1447 aa37.39■■■■□ 3.58
SUB1-207ENST00000510442 THOC2Q8NI27 1593 aaKnown RBP37.34■■■■□ 3.57
SUB1-207ENST00000510442 CADPSQ9ULU8 1353 aa37.34■■■■□ 3.57
SUB1-207ENST00000510442 KIF21AQ7Z4S6 1674 aa37.28■■■■□ 3.56
SUB1-207ENST00000510442 RSF1Q96T23 1441 aaPredicted RBP37.23■■■■□ 3.55
SUB1-207ENST00000510442 MRC2Q9UBG0 1479 aa37.01■■■■□ 3.52
SUB1-207ENST00000510442 TOP2AP11388 1531 aaKnown RBP37.01■■■■□ 3.52
SUB1-207ENST00000510442 CFTRP13569 1480 aa36.93■■■■□ 3.5
SUB1-207ENST00000510442 CEP164Q9UPV0 1460 aa36.9■■■■□ 3.5
SUB1-207ENST00000510442 WDR62O43379 1518 aa36.9■■■■□ 3.5
SUB1-207ENST00000510442 FANCD2Q9BXW9 1451 aa36.88■■■■□ 3.5
SUB1-207ENST00000510442 CCDC88BA6NC98 1476 aa36.62■■■■□ 3.45
SUB1-207ENST00000510442 URB2Q14146 1524 aaKnown RBP36.56■■■■□ 3.44
SUB1-207ENST00000510442 PRDM2Q13029 1718 aa36.51■■■■□ 3.44
SUB1-207ENST00000510442 TOPBP1Q92547 1522 aa36.2■■■■□ 3.39
SUB1-207ENST00000510442 OSCARQ8IYS5 282 aa36.2■■■■□ 3.39
SUB1-207ENST00000510442 ABCC8Q09428 1581 aa36.18■■■■□ 3.38
SUB1-207ENST00000510442 IFT140Q96RY7 1462 aa36.18■■■■□ 3.38
SUB1-207ENST00000510442 ZNF608Q9ULD9 1512 aaPredicted RBP36.08■■■■□ 3.37
SUB1-207ENST00000510442 DNMBPQ6XZF7 1577 aa36.06■■■■□ 3.36
SUB1-207ENST00000510442 TRIM41Q8WV44 630 aa36.06■■■■□ 3.36
SUB1-207ENST00000510442 TARBP1Q13395 1621 aaKnown RBP35.86■■■■□ 3.33
SUB1-207ENST00000510442 EIF4G3O43432 1585 aaKnown RBP35.85■■■■□ 3.33
SUB1-207ENST00000510442 POLA1P09884 1462 aaPredicted RBP35.84■■■■□ 3.33
SUB1-207ENST00000510442 AQRO60306 1485 aaKnown RBP eCLIP35.8■■■■□ 3.325e-10■■■■■ 39.2
SUB1-207ENST00000510442 SUPT5HO00267 1087 aaKnown RBP35.73■■■■□ 3.31
SUB1-207ENST00000510442 SOGA1O94964 1423 aa35.72■■■■□ 3.31
SUB1-207ENST00000510442 RAD54L2Q9Y4B4 1467 aa35.71■■■■□ 3.31
SUB1-207ENST00000510442 FGD5Q6ZNL6 1462 aa35.63■■■■□ 3.29
SUB1-207ENST00000510442 CUX1P39880 1505 aa35.62■■■■□ 3.29
SUB1-207ENST00000510442 TDRD9Q8NDG6 1382 aaKnown RBP35.62■■■■□ 3.29
SUB1-207ENST00000510442 RIMBP3CA6NJZ7 1639 aa35.61■■■■□ 3.29
SUB1-207ENST00000510442 RIMBP3BA6NNM3 1639 aa35.61■■■■□ 3.29
SUB1-207ENST00000510442 RIMBP3Q9UFD9 1639 aa35.61■■■■□ 3.29
SUB1-207ENST00000510442 FBLN2P98095 1184 aa35.56■■■■□ 3.28
SUB1-207ENST00000510442 CHD1O14646 1710 aa35.56■■■■□ 3.28
SUB1-207ENST00000510442 ARHGEF11O15085 1522 aa35.52■■■■□ 3.28
SUB1-207ENST00000510442 WDR97A6NE52 1622 aa35.51■■■■□ 3.28
SUB1-207ENST00000510442 SNAPC4Q5SXM2 1469 aa35.41■■■■□ 3.26
SUB1-207ENST00000510442 GRIN2BQ13224 1484 aa35.37■■■■□ 3.25
SUB1-207ENST00000510442 CHMP7Q8WUX9 453 aaPredicted RBP35.35■■■■□ 3.25
SUB1-207ENST00000510442 MAGI1Q96QZ7 1491 aaPredicted RBP35.35■■■■□ 3.25
SUB1-207ENST00000510442 CYB5RLQ6IPT4 315 aa35.33■■■■□ 3.25
SUB1-207ENST00000510442 GAPVD1Q14C86 1478 aa35.27■■■■□ 3.24
SUB1-207ENST00000510442 ABCA10Q8WWZ4 1543 aa35.26■■■■□ 3.23
SUB1-207ENST00000510442 SYNJ2O15056 1496 aa35.22■■■■□ 3.23
SUB1-207ENST00000510442 ARAP1Q96P48 1450 aa35.19■■■■□ 3.22
SUB1-207ENST00000510442 PBRM1Q86U86 1689 aa35.18■■■■□ 3.22
SUB1-207ENST00000510442 SYNJ1O43426 1573 aa35.18■■■■□ 3.22
SUB1-207ENST00000510442 CLASP1Q7Z460 1538 aa35.18■■■■□ 3.22
SUB1-207ENST00000510442 WRNQ14191 1432 aaPredicted RBP eCLIP35.17■■■■□ 3.22
SUB1-207ENST00000510442 ABCA5Q8WWZ7 1642 aa35.14■■■■□ 3.22
SUB1-207ENST00000510442 TOP2BQ02880 1626 aa35.1■■■■□ 3.21
SUB1-207ENST00000510442 BIVM-ERCC5R4GMW8 1640 aa35.09■■■■□ 3.21
SUB1-207ENST00000510442 GRIN2AQ12879 1464 aa34.9■■■■□ 3.18
SUB1-207ENST00000510442 TRHP20396 242 aaPredicted RBP34.88■■■■□ 3.17
SUB1-207ENST00000510442 ADAMTS12P58397 1594 aa34.86■■■■□ 3.17
SUB1-207ENST00000510442 FHAD1B1AJZ9 1412 aa34.83■■■■□ 3.17
SUB1-207ENST00000510442 ERICH3Q5RHP9 1530 aa34.81■■■■□ 3.16
SUB1-207ENST00000510442 NUP160Q12769 1436 aa34.78■■■■□ 3.16
SUB1-207ENST00000510442 CEP170Q5SW79 1584 aa34.74■■■■□ 3.15
SUB1-207ENST00000510442 ERCC6L2Q5T890 1561 aa34.63■■■■□ 3.13
SUB1-207ENST00000510442 SHROOM2Q13796 1616 aa34.59■■■■□ 3.13
SUB1-207ENST00000510442 JPH4Q96JJ6 628 aa34.5■■■■□ 3.11
SUB1-207ENST00000510442 IGF1RP08069 1367 aa34.46■■■■□ 3.11
SUB1-207ENST00000510442 KIF27Q86VH2 1401 aa34.46■■■■□ 3.11
SUB1-207ENST00000510442 PRG4Q92954 1404 aaPredicted RBP34.46■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms