RNA–Protein interactions for RNA: ENST00000512913.5

SUB1-211, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SUB1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-211ENST00000512913 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
SUB1-211ENST00000512913 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
SUB1-211ENST00000512913 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
SUB1-211ENST00000512913 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
SUB1-211ENST00000512913 FOXD1Q16676 465 aa17.99■□□□□ 0.47
SUB1-211ENST00000512913 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
SUB1-211ENST00000512913 PPP6R1Q9UPN7 881 aa17.02■□□□□ 0.32
SUB1-211ENST00000512913 ADRA2BP18089 450 aa16.94■□□□□ 0.3
SUB1-211ENST00000512913 PIAS4Q8N2W9 510 aaPredicted RBP16.82■□□□□ 0.28
SUB1-211ENST00000512913 MSH5O43196 834 aa16.74■□□□□ 0.27
SUB1-211ENST00000512913 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
SUB1-211ENST00000512913 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
SUB1-211ENST00000512913 MAPK8IP2Q13387 824 aaPredicted RBP15.46■□□□□ 0.07
SUB1-211ENST00000512913 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
SUB1-211ENST00000512913 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
SUB1-211ENST00000512913 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
SUB1-211ENST00000512913 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
SUB1-211ENST00000512913 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
SUB1-211ENST00000512913 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
SUB1-211ENST00000512913 KCNA4P22459 653 aa14.86□□□□□ -0.03
SUB1-211ENST00000512913 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
SUB1-211ENST00000512913 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
SUB1-211ENST00000512913 DNAJC5BQ9UF47 199 aa14.53□□□□□ -0.08
SUB1-211ENST00000512913 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
SUB1-211ENST00000512913 SLC4A1APQ9BWU0 796 aaKnown RBP14.14□□□□□ -0.15
SUB1-211ENST00000512913 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
SUB1-211ENST00000512913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
SUB1-211ENST00000512913 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
SUB1-211ENST00000512913 SLC4A2P04920 1241 aa14□□□□□ -0.17
SUB1-211ENST00000512913 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
SUB1-211ENST00000512913 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
SUB1-211ENST00000512913 ZBTB22O15209 634 aa13.68□□□□□ -0.22
SUB1-211ENST00000512913 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
SUB1-211ENST00000512913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.63□□□□□ -0.23
SUB1-211ENST00000512913 HNRNPUL2Q1KMD3 747 aaKnown RBP13.63□□□□□ -0.23
SUB1-211ENST00000512913 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
SUB1-211ENST00000512913 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
SUB1-211ENST00000512913 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
SUB1-211ENST00000512913 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
SUB1-211ENST00000512913 APLP2Q06481 763 aa13.56□□□□□ -0.24
SUB1-211ENST00000512913 CAPN15O75808 1086 aa13.53□□□□□ -0.24
SUB1-211ENST00000512913 DSG3P32926 999 aa13.5□□□□□ -0.25
SUB1-211ENST00000512913 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
SUB1-211ENST00000512913 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
SUB1-211ENST00000512913 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
SUB1-211ENST00000512913 ABCB7O75027 752 aa13.23□□□□□ -0.29
SUB1-211ENST00000512913 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
SUB1-211ENST00000512913 POLA2Q14181 598 aa13.1□□□□□ -0.31
SUB1-211ENST00000512913 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
SUB1-211ENST00000512913 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
SUB1-211ENST00000512913 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
SUB1-211ENST00000512913 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
SUB1-211ENST00000512913 FBLN2P98095 1184 aa12.66□□□□□ -0.38
SUB1-211ENST00000512913 AKT1S1Q96B36 256 aa12.63□□□□□ -0.39
SUB1-211ENST00000512913 SPDYE2BA6NHP3 402 aa12.56□□□□□ -0.4
SUB1-211ENST00000512913 SPDYE6P0CI01 402 aa12.56□□□□□ -0.4
SUB1-211ENST00000512913 SPDYE2Q495Y8 402 aa12.56□□□□□ -0.4
SUB1-211ENST00000512913 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
SUB1-211ENST00000512913 POTEHQ6S545 545 aa12.47□□□□□ -0.41
SUB1-211ENST00000512913 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
SUB1-211ENST00000512913 CHRDL2Q6WN34 429 aa12.45□□□□□ -0.42
SUB1-211ENST00000512913 FKBP8Q14318 412 aa12.37□□□□□ -0.43
SUB1-211ENST00000512913 ZNF692Q9BU19 519 aaPredicted RBP12.36□□□□□ -0.43
SUB1-211ENST00000512913 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
SUB1-211ENST00000512913 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
SUB1-211ENST00000512913 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
SUB1-211ENST00000512913 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
SUB1-211ENST00000512913 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
SUB1-211ENST00000512913 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
SUB1-211ENST00000512913 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
SUB1-211ENST00000512913 PROM2Q8N271 834 aa12.07□□□□□ -0.48
SUB1-211ENST00000512913 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
SUB1-211ENST00000512913 PRR29P0C7W0 189 aa11.98□□□□□ -0.49
SUB1-211ENST00000512913 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.49
SUB1-211ENST00000512913 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
SUB1-211ENST00000512913 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
SUB1-211ENST00000512913 SP7Q8TDD2 431 aaPredicted RBP11.83□□□□□ -0.52
SUB1-211ENST00000512913 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
SUB1-211ENST00000512913 HAX1O00165 279 aa11.82□□□□□ -0.52
SUB1-211ENST00000512913 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
SUB1-211ENST00000512913 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
SUB1-211ENST00000512913 EVX2Q03828 476 aa11.78□□□□□ -0.52
SUB1-211ENST00000512913 MNX1P50219 401 aaPredicted RBP11.73□□□□□ -0.53
SUB1-211ENST00000512913 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
SUB1-211ENST00000512913 MIER1Q8N108 512 aa11.65□□□□□ -0.54
SUB1-211ENST00000512913 CD44P16070 742 aaKnown RBP11.63□□□□□ -0.55
SUB1-211ENST00000512913 PLCD3Q8N3E9 789 aa11.62□□□□□ -0.55
SUB1-211ENST00000512913 NPM1P06748 294 aaKnown RBP eCLIP11.56□□□□□ -0.56
SUB1-211ENST00000512913 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
SUB1-211ENST00000512913 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
SUB1-211ENST00000512913 ZNF579Q8NAF0 562 aaKnown RBP11.55□□□□□ -0.56
SUB1-211ENST00000512913 GABBR2O75899 941 aa11.53□□□□□ -0.56
SUB1-211ENST00000512913 CLCN6P51797 869 aa11.52□□□□□ -0.57
SUB1-211ENST00000512913 PLEKHG5O94827 1062 aa11.49□□□□□ -0.57
SUB1-211ENST00000512913 ZRANB1Q9UGI0 708 aa11.48□□□□□ -0.57
SUB1-211ENST00000512913 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
SUB1-211ENST00000512913 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
SUB1-211ENST00000512913 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
SUB1-211ENST00000512913 SPOCK2Q92563 424 aa11.38□□□□□ -0.59
SUB1-211ENST00000512913 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms