RNA–Protein interactions for RNA: ENST00000506237.5

SUB1-206, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SUB1, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-206ENST00000506237 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
SUB1-206ENST00000506237 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
SUB1-206ENST00000506237 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
SUB1-206ENST00000506237 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
SUB1-206ENST00000506237 FOXD1Q16676 465 aa17.28■□□□□ 0.36
SUB1-206ENST00000506237 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
SUB1-206ENST00000506237 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
SUB1-206ENST00000506237 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
SUB1-206ENST00000506237 ADRA2BP18089 450 aa16.51■□□□□ 0.23
SUB1-206ENST00000506237 PIAS4Q8N2W9 510 aaPredicted RBP16.18■□□□□ 0.18
SUB1-206ENST00000506237 MSH5O43196 834 aa16.12■□□□□ 0.17
SUB1-206ENST00000506237 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0
SUB1-206ENST00000506237 PPP4R3CPQ6ZMV5 832 aa15.05■□□□□ -0
SUB1-206ENST00000506237 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
SUB1-206ENST00000506237 DMRT2Q9Y5R5 561 aa14.75□□□□□ -0.05
SUB1-206ENST00000506237 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
SUB1-206ENST00000506237 KCNA4P22459 653 aa14.54□□□□□ -0.08
SUB1-206ENST00000506237 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
SUB1-206ENST00000506237 NPM3O75607 178 aaKnown RBP14.4□□□□□ -0.1
SUB1-206ENST00000506237 HOXD11P31277 338 aaPredicted RBP14.39□□□□□ -0.11
SUB1-206ENST00000506237 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
SUB1-206ENST00000506237 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
SUB1-206ENST00000506237 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
SUB1-206ENST00000506237 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
SUB1-206ENST00000506237 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
SUB1-206ENST00000506237 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
SUB1-206ENST00000506237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.22
SUB1-206ENST00000506237 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
SUB1-206ENST00000506237 U3KPZ7 1027 aaPredicted RBP13.5□□□□□ -0.25
SUB1-206ENST00000506237 ZBTB22O15209 634 aa13.43□□□□□ -0.26
SUB1-206ENST00000506237 C1QBPQ07021 282 aaKnown RBP13.42□□□□□ -0.26
SUB1-206ENST00000506237 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
SUB1-206ENST00000506237 MYCNP04198 464 aaPredicted RBP13.22□□□□□ -0.29
SUB1-206ENST00000506237 SPINK5Q9NQ38 1064 aaPredicted RBP13.22□□□□□ -0.29
SUB1-206ENST00000506237 POTEHQ6S545 545 aa13.2□□□□□ -0.3
SUB1-206ENST00000506237 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
SUB1-206ENST00000506237 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
SUB1-206ENST00000506237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
SUB1-206ENST00000506237 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
SUB1-206ENST00000506237 CAPN15O75808 1086 aa13.09□□□□□ -0.31
SUB1-206ENST00000506237 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
SUB1-206ENST00000506237 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
SUB1-206ENST00000506237 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.33
SUB1-206ENST00000506237 APLP2Q06481 763 aa12.96□□□□□ -0.33
SUB1-206ENST00000506237 DSG3P32926 999 aa12.95□□□□□ -0.34
SUB1-206ENST00000506237 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
SUB1-206ENST00000506237 ABCB7O75027 752 aa12.88□□□□□ -0.35
SUB1-206ENST00000506237 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
SUB1-206ENST00000506237 POLA2Q14181 598 aa12.78□□□□□ -0.36
SUB1-206ENST00000506237 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
SUB1-206ENST00000506237 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
SUB1-206ENST00000506237 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
SUB1-206ENST00000506237 FBLN2P98095 1184 aa12.31□□□□□ -0.44
SUB1-206ENST00000506237 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
SUB1-206ENST00000506237 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
SUB1-206ENST00000506237 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
SUB1-206ENST00000506237 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
SUB1-206ENST00000506237 ZNF692Q9BU19 519 aaPredicted RBP12.09□□□□□ -0.47
SUB1-206ENST00000506237 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
SUB1-206ENST00000506237 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
SUB1-206ENST00000506237 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
SUB1-206ENST00000506237 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
SUB1-206ENST00000506237 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
SUB1-206ENST00000506237 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
SUB1-206ENST00000506237 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
SUB1-206ENST00000506237 PITPNM1O00562 1244 aa11.89□□□□□ -0.51
SUB1-206ENST00000506237 FKBP8Q14318 412 aa11.87□□□□□ -0.51
SUB1-206ENST00000506237 CLEC11AQ9Y240 323 aa11.81□□□□□ -0.52
SUB1-206ENST00000506237 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
SUB1-206ENST00000506237 PROM2Q8N271 834 aa11.78□□□□□ -0.52
SUB1-206ENST00000506237 PIP4P2Q8N4L2 257 aa11.71□□□□□ -0.53
SUB1-206ENST00000506237 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.54
SUB1-206ENST00000506237 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
SUB1-206ENST00000506237 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
SUB1-206ENST00000506237 STAG3Q9UJ98 1225 aa11.6□□□□□ -0.55
SUB1-206ENST00000506237 PRKAR2AP13861 404 aaKnown RBP11.58□□□□□ -0.56
SUB1-206ENST00000506237 CREBZFQ9NS37 354 aa11.53□□□□□ -0.56
SUB1-206ENST00000506237 HAX1O00165 279 aa11.5□□□□□ -0.57
SUB1-206ENST00000506237 FARP1Q9Y4F1 1045 aaPredicted RBP11.42□□□□□ -0.58
SUB1-206ENST00000506237 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
SUB1-206ENST00000506237 MIER1Q8N108 512 aa11.4□□□□□ -0.58
SUB1-206ENST00000506237 EVX2Q03828 476 aa11.39□□□□□ -0.59
SUB1-206ENST00000506237 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
SUB1-206ENST00000506237 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
SUB1-206ENST00000506237 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
SUB1-206ENST00000506237 VASPP50552 380 aaPredicted RBP11.3□□□□□ -0.6
SUB1-206ENST00000506237 CD44P16070 742 aaKnown RBP11.22□□□□□ -0.61
SUB1-206ENST00000506237 LHX8Q68G74 356 aa11.22□□□□□ -0.61
SUB1-206ENST00000506237 IFNLR1Q8IU57 520 aaPredicted RBP11.22□□□□□ -0.61
SUB1-206ENST00000506237 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
SUB1-206ENST00000506237 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
SUB1-206ENST00000506237 PLSCR2Q9NRY7 297 aa11.17□□□□□ -0.62
SUB1-206ENST00000506237 NUBP1P53384 320 aa11.16□□□□□ -0.62
SUB1-206ENST00000506237 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
SUB1-206ENST00000506237 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
SUB1-206ENST00000506237 ZRANB1Q9UGI0 708 aa11.14□□□□□ -0.63
SUB1-206ENST00000506237 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
SUB1-206ENST00000506237 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
SUB1-206ENST00000506237 GABBR2O75899 941 aa11.07□□□□□ -0.64
SUB1-206ENST00000506237 PHF12Q96QT6 1004 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms