Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.1■□□□□ 0.97
CSMD1Q96PZ7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSMD1Q96PZ7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.1■□□□□ 0.97
CSMD1Q96PZ7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.1■□□□□ 0.97
CSMD1Q96PZ7 AL136116.3-201ENST00000402907 1138 ntBASIC21.09■□□□□ 0.97
CSMD1Q96PZ7 AC019171.1-201ENST00000601251 1056 ntBASIC21.09■□□□□ 0.97
CSMD1Q96PZ7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.09■□□□□ 0.97
CSMD1Q96PZ7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.09■□□□□ 0.97
CSMD1Q96PZ7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSMD1Q96PZ7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSMD1Q96PZ7 AC100797.4-201ENST00000631653 1827 ntBASIC21.08■□□□□ 0.96
CSMD1Q96PZ7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSMD1Q96PZ7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
CSMD1Q96PZ7 AC135279.3-201ENST00000610945 1311 ntBASIC21.08■□□□□ 0.96
CSMD1Q96PZ7 AC096631.2-201ENST00000436136 790 ntBASIC21.07■□□□□ 0.96
CSMD1Q96PZ7 MIR5787-201ENST00000611784 55 ntBASIC21.07■□□□□ 0.96
CSMD1Q96PZ7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.07■□□□□ 0.96
CSMD1Q96PZ7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.07■□□□□ 0.96
CSMD1Q96PZ7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.07■□□□□ 0.96
CSMD1Q96PZ7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSMD1Q96PZ7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.07■□□□□ 0.96
CSMD1Q96PZ7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.07■□□□□ 0.96
CSMD1Q96PZ7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSMD1Q96PZ7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CSMD1Q96PZ7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.06■□□□□ 0.96
CSMD1Q96PZ7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.05■□□□□ 0.96
CSMD1Q96PZ7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.05■□□□□ 0.96
CSMD1Q96PZ7 KRT16P3-201ENST00000439127 1283 ntBASIC21.04■□□□□ 0.96
CSMD1Q96PZ7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.04■□□□□ 0.96
CSMD1Q96PZ7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSMD1Q96PZ7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSMD1Q96PZ7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSMD1Q96PZ7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSMD1Q96PZ7 MIR4466-201ENST00000606121 54 ntBASIC21.04■□□□□ 0.96
CSMD1Q96PZ7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSMD1Q96PZ7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSMD1Q96PZ7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSMD1Q96PZ7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.03■□□□□ 0.96
CSMD1Q96PZ7 AC133561.4-201ENST00000566112 224 ntBASIC21.03■□□□□ 0.96
CSMD1Q96PZ7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CSMD1Q96PZ7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSMD1Q96PZ7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.03■□□□□ 0.96
CSMD1Q96PZ7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.03■□□□□ 0.96
CSMD1Q96PZ7 MIR3960-201ENST00000583311 91 ntBASIC21.03■□□□□ 0.96
CSMD1Q96PZ7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSMD1Q96PZ7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSMD1Q96PZ7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSMD1Q96PZ7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSMD1Q96PZ7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSMD1Q96PZ7 AC087393.1-201ENST00000582896 145 ntBASIC21.02■□□□□ 0.96
CSMD1Q96PZ7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.01■□□□□ 0.95
CSMD1Q96PZ7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CSMD1Q96PZ7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSMD1Q96PZ7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSMD1Q96PZ7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CSMD1Q96PZ7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSMD1Q96PZ7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSMD1Q96PZ7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSMD1Q96PZ7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CSMD1Q96PZ7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSMD1Q96PZ7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21■□□□□ 0.95
CSMD1Q96PZ7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.99■□□□□ 0.95
CSMD1Q96PZ7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CSMD1Q96PZ7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSMD1Q96PZ7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSMD1Q96PZ7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSMD1Q96PZ7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.98■□□□□ 0.95
CSMD1Q96PZ7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CSMD1Q96PZ7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.98■□□□□ 0.95
CSMD1Q96PZ7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CSMD1Q96PZ7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CSMD1Q96PZ7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSMD1Q96PZ7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSMD1Q96PZ7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSMD1Q96PZ7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CSMD1Q96PZ7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSMD1Q96PZ7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSMD1Q96PZ7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CSMD1Q96PZ7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSMD1Q96PZ7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSMD1Q96PZ7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSMD1Q96PZ7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSMD1Q96PZ7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSMD1Q96PZ7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.96■□□□□ 0.95
CSMD1Q96PZ7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSMD1Q96PZ7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.95■□□□□ 0.94
CSMD1Q96PZ7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSMD1Q96PZ7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSMD1Q96PZ7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSMD1Q96PZ7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSMD1Q96PZ7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSMD1Q96PZ7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CSMD1Q96PZ7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.94■□□□□ 0.94
CSMD1Q96PZ7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSMD1Q96PZ7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSMD1Q96PZ7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSMD1Q96PZ7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.94■□□□□ 0.94
CSMD1Q96PZ7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSMD1Q96PZ7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSMD1Q96PZ7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms