RNA–Protein interactions for RNA: ENST00000619916.4

ACBD4-216, Transcript of acyl-CoA binding domain containing 4, humanhuman

TSL 5 BASIC

Gene ACBD4, Length 1,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACBD4-216ENST00000619916 NISCHQ9Y2I1 1504 aa55.33■■■■■ 6.45
ACBD4-216ENST00000619916 ABCC9O60706 1549 aa49.83■■■■■ 5.57
ACBD4-216ENST00000619916 CCDC180Q9P1Z9 1646 aa49.7■■■■■ 5.55
ACBD4-216ENST00000619916 RB1CC1Q8TDY2 1594 aa47.37■■■■■ 5.17
ACBD4-216ENST00000619916 NACADO15069 1562 aa47.03■■■■■ 5.12
ACBD4-216ENST00000619916 DNAJC5BQ9UF47 199 aa46.98■■■■■ 5.11
ACBD4-216ENST00000619916 DCAF8L2P0C7V8 631 aa46.64■■■■■ 5.06
ACBD4-216ENST00000619916 MYO15BQ96JP2 1530 aa46.38■■■■■ 5.02
ACBD4-216ENST00000619916 PABPN1Q86U42 306 aaKnown RBP eCLIP46.37■■■■■ 5.01
ACBD4-216ENST00000619916 UNC13AQ9UPW8 1703 aa46.34■■■■■ 5.01
ACBD4-216ENST00000619916 BICRAQ9NZM4 1560 aa46.07■■■■■ 4.97
ACBD4-216ENST00000619916 ZCCHC6Q5VYS8 1495 aaKnown RBP45.83■■■■■ 4.93
ACBD4-216ENST00000619916 DCAF1Q9Y4B6 1507 aa45.72■■■■■ 4.91
ACBD4-216ENST00000619916 SHROOM4Q9ULL8 1493 aa45.4■■■■■ 4.86
ACBD4-216ENST00000619916 SCRIBQ14160 1630 aa45.24■■■■■ 4.83
ACBD4-216ENST00000619916 CC2D2AQ9P2K1 1620 aa45.04■■■■■ 4.8
ACBD4-216ENST00000619916 CECR2Q9BXF3 1484 aa44.92■■■■■ 4.78
ACBD4-216ENST00000619916 EIF4G1Q04637 1599 aaKnown RBP44.91■■■■■ 4.78
ACBD4-216ENST00000619916 NCAPD3P42695 1498 aa43.45■■■■■ 4.55
ACBD4-216ENST00000619916 ATAD2BQ9ULI0 1458 aa43.28■■■■■ 4.52
ACBD4-216ENST00000619916 DNAJC5Q9H3Z4 198 aa43.23■■■■■ 4.51
ACBD4-216ENST00000619916 SMARCA4P51532 1647 aa43.18■■■■■ 4.5
ACBD4-216ENST00000619916 SMARCA2P51531 1590 aa43.12■■■■■ 4.49
ACBD4-216ENST00000619916 HMGXB3Q12766 1538 aa43.09■■■■■ 4.49
ACBD4-216ENST00000619916 CUX2O14529 1486 aa43.04■■■■■ 4.48
ACBD4-216ENST00000619916 ERCC6Q03468 1493 aa42.99■■■■■ 4.47
ACBD4-216ENST00000619916 BAZ1AQ9NRL2 1556 aaPredicted RBP42.93■■■■■ 4.46
ACBD4-216ENST00000619916 PEG3Q9GZU2 1588 aa42.81■■■■■ 4.44
ACBD4-216ENST00000619916 BAZ1BQ9UIG0 1483 aaKnown RBP42.81■■■■■ 4.44
ACBD4-216ENST00000619916 NESP48681 1621 aa42.79■■■■■ 4.44
ACBD4-216ENST00000619916 MROH2BQ7Z745 1585 aa42.63■■■■■ 4.41
ACBD4-216ENST00000619916 LAMC3Q9Y6N6 1575 aa42.46■■■■■ 4.39
ACBD4-216ENST00000619916 THOC2Q8NI27 1593 aaKnown RBP42.4■■■■■ 4.38
ACBD4-216ENST00000619916 KIF21AQ7Z4S6 1674 aa42.22■■■■■ 4.35
ACBD4-216ENST00000619916 PDS5BQ9NTI5 1447 aa42.2■■■■■ 4.35
ACBD4-216ENST00000619916 CADPSQ9ULU8 1353 aa42.1■■■■■ 4.33
ACBD4-216ENST00000619916 WIZO95785 1651 aa42.09■■■■■ 4.33
ACBD4-216ENST00000619916 MRC2Q9UBG0 1479 aa41.85■■■■■ 4.29
ACBD4-216ENST00000619916 WDR62O43379 1518 aa41.79■■■■■ 4.28
ACBD4-216ENST00000619916 RSF1Q96T23 1441 aaPredicted RBP41.69■■■■■ 4.27
ACBD4-216ENST00000619916 CEP164Q9UPV0 1460 aa41.64■■■■■ 4.26
ACBD4-216ENST00000619916 CFTRP13569 1480 aa41.6■■■■■ 4.25
ACBD4-216ENST00000619916 FANCD2Q9BXW9 1451 aa41.6■■■■■ 4.25
ACBD4-216ENST00000619916 TOP2AP11388 1531 aaKnown RBP41.54■■■■■ 4.24
ACBD4-216ENST00000619916 URB2Q14146 1524 aaKnown RBP41.3■■■■■ 4.2
ACBD4-216ENST00000619916 TRIM41Q8WV44 630 aa41.16■■■■■ 4.18
ACBD4-216ENST00000619916 PRDM2Q13029 1718 aa41.13■■■■■ 4.17
ACBD4-216ENST00000619916 CCDC88BA6NC98 1476 aa41.09■■■■■ 4.17
ACBD4-216ENST00000619916 OSCARQ8IYS5 282 aa41.03■■■■■ 4.16
ACBD4-216ENST00000619916 IFT140Q96RY7 1462 aa40.83■■■■■ 4.13
ACBD4-216ENST00000619916 ZNF608Q9ULD9 1512 aaPredicted RBP40.82■■■■■ 4.12
ACBD4-216ENST00000619916 TOPBP1Q92547 1522 aa40.81■■■■■ 4.12
ACBD4-216ENST00000619916 ABCC8Q09428 1581 aa40.69■■■■■ 4.1
ACBD4-216ENST00000619916 DNMBPQ6XZF7 1577 aa40.63■■■■■ 4.09
ACBD4-216ENST00000619916 EIF4G3O43432 1585 aaKnown RBP40.55■■■■■ 4.08
ACBD4-216ENST00000619916 RIMBP3CA6NJZ7 1639 aa40.53■■■■■ 4.08
ACBD4-216ENST00000619916 RIMBP3BA6NNM3 1639 aa40.53■■■■■ 4.08
ACBD4-216ENST00000619916 RIMBP3Q9UFD9 1639 aa40.53■■■■■ 4.08
ACBD4-216ENST00000619916 TARBP1Q13395 1621 aaKnown RBP40.49■■■■■ 4.07
ACBD4-216ENST00000619916 AQRO60306 1485 aaKnown RBP eCLIP40.41■■■■■ 4.061e-6■■■■■ 38.5
ACBD4-216ENST00000619916 ARHGEF11O15085 1522 aa40.39■■■■■ 4.06
ACBD4-216ENST00000619916 POLA1P09884 1462 aaPredicted RBP40.39■■■■■ 4.06
ACBD4-216ENST00000619916 CHD1O14646 1710 aa40.28■■■■■ 4.04
ACBD4-216ENST00000619916 RAD54L2Q9Y4B4 1467 aa40.24■■■■■ 4.03
ACBD4-216ENST00000619916 SOGA1O94964 1423 aa40.17■■■■■ 4.02
ACBD4-216ENST00000619916 TDRD9Q8NDG6 1382 aaKnown RBP40.12■■■■■ 4.01
ACBD4-216ENST00000619916 FGD5Q6ZNL6 1462 aa40.09■■■■■ 4.01
ACBD4-216ENST00000619916 FBLN2P98095 1184 aa40.09■■■■■ 4.01
ACBD4-216ENST00000619916 CYB5RLQ6IPT4 315 aa40.06■■■■■ 4
ACBD4-216ENST00000619916 CUX1P39880 1505 aa40.06■■■■■ 4
ACBD4-216ENST00000619916 WDR97A6NE52 1622 aa40.04■■■■■ 4
ACBD4-216ENST00000619916 ARAP1Q96P48 1450 aa40■■■■□ 3.99
ACBD4-216ENST00000619916 SNAPC4Q5SXM2 1469 aa39.98■■■■□ 3.99
ACBD4-216ENST00000619916 MAGI1Q96QZ7 1491 aaPredicted RBP39.88■■■■□ 3.97
ACBD4-216ENST00000619916 CLASP1Q7Z460 1538 aa39.86■■■■□ 3.97
ACBD4-216ENST00000619916 GRIN2BQ13224 1484 aa39.85■■■■□ 3.97
ACBD4-216ENST00000619916 CHMP7Q8WUX9 453 aaPredicted RBP39.8■■■■□ 3.96
ACBD4-216ENST00000619916 SYNJ1O43426 1573 aa39.76■■■■□ 3.95
ACBD4-216ENST00000619916 SYNJ2O15056 1496 aa39.75■■■■□ 3.95
ACBD4-216ENST00000619916 GAPVD1Q14C86 1478 aa39.68■■■■□ 3.94
ACBD4-216ENST00000619916 PBRM1Q86U86 1689 aa39.67■■■■□ 3.94
ACBD4-216ENST00000619916 ABCA10Q8WWZ4 1543 aa39.65■■■■□ 3.94
ACBD4-216ENST00000619916 SUPT5HO00267 1087 aaKnown RBP39.62■■■■□ 3.93
ACBD4-216ENST00000619916 TRHP20396 242 aaPredicted RBP39.61■■■■□ 3.93
ACBD4-216ENST00000619916 ABCA5Q8WWZ7 1642 aa39.61■■■■□ 3.93
ACBD4-216ENST00000619916 WRNQ14191 1432 aaPredicted RBP eCLIP39.42■■■■□ 3.9
ACBD4-216ENST00000619916 TOP2BQ02880 1626 aa39.36■■■■□ 3.89
ACBD4-216ENST00000619916 BIVM-ERCC5R4GMW8 1640 aa39.36■■■■□ 3.89
ACBD4-216ENST00000619916 GRIN2AQ12879 1464 aa39.35■■■■□ 3.89
ACBD4-216ENST00000619916 ADAMTS12P58397 1594 aa39.31■■■■□ 3.88
ACBD4-216ENST00000619916 NUP160Q12769 1436 aa39.26■■■■□ 3.88
ACBD4-216ENST00000619916 CEP170Q5SW79 1584 aa39.23■■■■□ 3.87
ACBD4-216ENST00000619916 ERCC6L2Q5T890 1561 aa39.22■■■■□ 3.87
ACBD4-216ENST00000619916 FHAD1B1AJZ9 1412 aa39.18■■■■□ 3.86
ACBD4-216ENST00000619916 ERICH3Q5RHP9 1530 aa39.14■■■■□ 3.86
ACBD4-216ENST00000619916 SHROOM2Q13796 1616 aa39.1■■■■□ 3.85
ACBD4-216ENST00000619916 PRG4Q92954 1404 aaPredicted RBP38.84■■■■□ 3.81
ACBD4-216ENST00000619916 JPH4Q96JJ6 628 aa38.81■■■■□ 3.8
ACBD4-216ENST00000619916 RUSC2Q8N2Y8 1516 aa38.76■■■■□ 3.8
ACBD4-216ENST00000619916 KIF13AQ9H1H9 1805 aa38.63■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms