Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 AD000864.1-201ENST00000624076 2295 ntBASIC15.28■□□□□ 0.04
SFTPBP07988 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
SFTPBP07988 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.28■□□□□ 0.04
SFTPBP07988 AC008687.5-201ENST00000593746 558 ntBASIC15.28■□□□□ 0.04
SFTPBP07988 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.28■□□□□ 0.04
SFTPBP07988 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.28■□□□□ 0.04
SFTPBP07988 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.28■□□□□ 0.04
SFTPBP07988 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.28■□□□□ 0.04
SFTPBP07988 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SFTPBP07988 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SFTPBP07988 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFTPBP07988 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.27■□□□□ 0.04
SFTPBP07988 FLJ16779-201ENST00000612722 7638 ntBASIC15.27■□□□□ 0.04
SFTPBP07988 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.27■□□□□ 0.04
SFTPBP07988 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SFTPBP07988 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFTPBP07988 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFTPBP07988 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFTPBP07988 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFTPBP07988 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SFTPBP07988 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SFTPBP07988 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SFTPBP07988 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SFTPBP07988 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFTPBP07988 RASA4DP-201ENST00000460726 1199 ntBASIC15.27■□□□□ 0.04
SFTPBP07988 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.27■□□□□ 0.04
SFTPBP07988 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
SFTPBP07988 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.27■□□□□ 0.03
SFTPBP07988 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.27■□□□□ 0.03
SFTPBP07988 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SFTPBP07988 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFTPBP07988 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.27■□□□□ 0.03
SFTPBP07988 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SFTPBP07988 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SFTPBP07988 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SFTPBP07988 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SFTPBP07988 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SFTPBP07988 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SFTPBP07988 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SFTPBP07988 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SFTPBP07988 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SFTPBP07988 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SFTPBP07988 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.26■□□□□ 0.03
SFTPBP07988 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.26■□□□□ 0.03
SFTPBP07988 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.26■□□□□ 0.03
SFTPBP07988 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SFTPBP07988 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 AC034232.1-201ENST00000506026 1064 ntBASIC15.26■□□□□ 0.03
SFTPBP07988 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SFTPBP07988 AC083849.1-201ENST00000615227 514 ntBASIC15.26■□□□□ 0.03
SFTPBP07988 AL121956.5-201ENST00000625261 221 ntBASIC15.26■□□□□ 0.03
SFTPBP07988 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.26■□□□□ 0.03
SFTPBP07988 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SFTPBP07988 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 AC141586.5-201ENST00000624546 2050 ntBASIC15.26■□□□□ 0.03
SFTPBP07988 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFTPBP07988 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms