RNA–Protein interactions for RNA: ENST00000369847.3

PCGF6-202, Transcript of polycomb group ring finger 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF6, Length 2,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF6-202ENST00000369847 NISCHQ9Y2I1 1504 aa38.65■■■■□ 3.78
PCGF6-202ENST00000369847 CCDC180Q9P1Z9 1646 aa33.46■■■□□ 2.95
PCGF6-202ENST00000369847 ZCCHC6Q5VYS8 1495 aaKnown RBP32.6■■■□□ 2.81
PCGF6-202ENST00000369847 ABCC9O60706 1549 aa32.31■■■□□ 2.76
PCGF6-202ENST00000369847 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
PCGF6-202ENST00000369847 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
PCGF6-202ENST00000369847 DCAF1Q9Y4B6 1507 aa31.86■■■□□ 2.69
PCGF6-202ENST00000369847 MYO15BQ96JP2 1530 aa31.33■■■□□ 2.61
PCGF6-202ENST00000369847 NACADO15069 1562 aa31.16■■■□□ 2.58
PCGF6-202ENST00000369847 SUPT5HO00267 1087 aaKnown RBP31.15■■■□□ 2.58
PCGF6-202ENST00000369847 SCRIBQ14160 1630 aa31.04■■■□□ 2.56
PCGF6-202ENST00000369847 RB1CC1Q8TDY2 1594 aa31■■■□□ 2.55
PCGF6-202ENST00000369847 UNC13AQ9UPW8 1703 aa30.43■■■□□ 2.46
PCGF6-202ENST00000369847 PABPN1Q86U42 306 aaKnown RBP eCLIP30.4■■■□□ 2.46
PCGF6-202ENST00000369847 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
PCGF6-202ENST00000369847 CECR2Q9BXF3 1484 aa30.19■■■□□ 2.42
PCGF6-202ENST00000369847 CHIC1Q5VXU3 224 aa30.19■■■□□ 2.42
PCGF6-202ENST00000369847 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
PCGF6-202ENST00000369847 MROH2BQ7Z745 1585 aa29.98■■■□□ 2.39
PCGF6-202ENST00000369847 WIZO95785 1651 aa29.76■■■□□ 2.35
PCGF6-202ENST00000369847 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
PCGF6-202ENST00000369847 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
PCGF6-202ENST00000369847 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
PCGF6-202ENST00000369847 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
PCGF6-202ENST00000369847 EIF4G1Q04637 1599 aaKnown RBP29.33■■■□□ 2.29
PCGF6-202ENST00000369847 PEG3Q9GZU2 1588 aa29.23■■■□□ 2.27
PCGF6-202ENST00000369847 ATAD2BQ9ULI0 1458 aa29.19■■■□□ 2.26
PCGF6-202ENST00000369847 SMARCA2P51531 1590 aa29.16■■■□□ 2.26
PCGF6-202ENST00000369847 TRIM41Q8WV44 630 aa29.15■■■□□ 2.26
PCGF6-202ENST00000369847 CC2D2AQ9P2K1 1620 aa29.13■■■□□ 2.25
PCGF6-202ENST00000369847 LOC105371045A0A1W2PR82 267 aa29.13■■■□□ 2.25
PCGF6-202ENST00000369847 CCDC88BA6NC98 1476 aa29.12■■■□□ 2.25
PCGF6-202ENST00000369847 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
PCGF6-202ENST00000369847 NCAPD3P42695 1498 aa28.84■■■□□ 2.21
PCGF6-202ENST00000369847 ABCC8Q09428 1581 aa28.8■■■□□ 2.2
PCGF6-202ENST00000369847 HMGXB3Q12766 1538 aa28.76■■■□□ 2.19
PCGF6-202ENST00000369847 FAM9AQ8IZU1 332 aaPredicted RBP28.74■■■□□ 2.19
PCGF6-202ENST00000369847 PCGF6Q9BYE7 350 aa28.45■■■□□ 2.15
PCGF6-202ENST00000369847 WRNQ14191 1432 aaPredicted RBP eCLIP28.41■■■□□ 2.14
PCGF6-202ENST00000369847 EHMT2Q96KQ7 1210 aa28.38■■■□□ 2.13
PCGF6-202ENST00000369847 SOGA1O94964 1423 aa28.37■■■□□ 2.13
PCGF6-202ENST00000369847 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
PCGF6-202ENST00000369847 RUSC2Q8N2Y8 1516 aa28.28■■■□□ 2.12
PCGF6-202ENST00000369847 CFTRP13569 1480 aa28.27■■■□□ 2.12
PCGF6-202ENST00000369847 EEA1Q15075 1411 aa28.25■■■□□ 2.11
PCGF6-202ENST00000369847 TRIM26Q12899 539 aaPredicted RBP28.18■■■□□ 2.1
PCGF6-202ENST00000369847 HRCP23327 699 aa28.17■■■□□ 2.1
PCGF6-202ENST00000369847 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
PCGF6-202ENST00000369847 NESP48681 1621 aa28.12■■■□□ 2.09
PCGF6-202ENST00000369847 TOP2BQ02880 1626 aa28.12■■■□□ 2.09
PCGF6-202ENST00000369847 CSRNP3Q8WYN3 585 aa28.11■■■□□ 2.09
PCGF6-202ENST00000369847 BIVM-ERCC5R4GMW8 1640 aa28.09■■■□□ 2.09
PCGF6-202ENST00000369847 TNIKQ9UKE5 1360 aa28.02■■■□□ 2.08
PCGF6-202ENST00000369847 PRDM2Q13029 1718 aa28■■■□□ 2.07
PCGF6-202ENST00000369847 CUX1P39880 1505 aa27.99■■■□□ 2.07
PCGF6-202ENST00000369847 CEP162Q5TB80 1403 aa27.98■■■□□ 2.07
PCGF6-202ENST00000369847 GOLGA3Q08378 1498 aa27.97■■■□□ 2.07
PCGF6-202ENST00000369847 KIF21BO75037 1637 aa27.97■■■□□ 2.07
PCGF6-202ENST00000369847 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.06
PCGF6-202ENST00000369847 FANCD2Q9BXW9 1451 aa27.86■■■□□ 2.05
PCGF6-202ENST00000369847 LAMC3Q9Y6N6 1575 aa27.83■■■□□ 2.05
PCGF6-202ENST00000369847 UBTFP17480 764 aaKnown RBP27.79■■■□□ 2.04
PCGF6-202ENST00000369847 RAPGEF2Q9Y4G8 1499 aa27.75■■■□□ 2.03
PCGF6-202ENST00000369847 ERCC6Q03468 1493 aa27.72■■■□□ 2.03
PCGF6-202ENST00000369847 PPARGC1BQ86YN6 1023 aaKnown RBP27.72■■■□□ 2.03
PCGF6-202ENST00000369847 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
PCGF6-202ENST00000369847 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
PCGF6-202ENST00000369847 PRXQ9BXM0 1461 aa27.65■■■□□ 2.02
PCGF6-202ENST00000369847 FGD5Q6ZNL6 1462 aa27.62■■■□□ 2.01
PCGF6-202ENST00000369847 ERICH3Q5RHP9 1530 aa27.62■■■□□ 2.01
PCGF6-202ENST00000369847 TOPBP1Q92547 1522 aa27.58■■■□□ 2.01
PCGF6-202ENST00000369847 KIF27Q86VH2 1401 aa27.57■■■□□ 2
PCGF6-202ENST00000369847 CLIP1P30622 1438 aa27.57■■■□□ 2
PCGF6-202ENST00000369847 URB2Q14146 1524 aaKnown RBP27.57■■■□□ 2
PCGF6-202ENST00000369847 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
PCGF6-202ENST00000369847 POLA1P09884 1462 aaPredicted RBP27.48■■□□□ 1.99
PCGF6-202ENST00000369847 RAD54L2Q9Y4B4 1467 aa27.48■■□□□ 1.99
PCGF6-202ENST00000369847 CUX2O14529 1486 aa27.47■■□□□ 1.99
PCGF6-202ENST00000369847 VPS8Q8N3P4 1428 aa27.43■■□□□ 1.98
PCGF6-202ENST00000369847 THOC2Q8NI27 1593 aaKnown RBP27.4■■□□□ 1.98
PCGF6-202ENST00000369847 MRC2Q9UBG0 1479 aa27.39■■□□□ 1.98
PCGF6-202ENST00000369847 IGF1RP08069 1367 aa27.35■■□□□ 1.97
PCGF6-202ENST00000369847 TTBK1Q5TCY1 1321 aaPredicted RBP27.33■■□□□ 1.97
PCGF6-202ENST00000369847 ABCA10Q8WWZ4 1543 aa27.32■■□□□ 1.96
PCGF6-202ENST00000369847 ARAP1Q96P48 1450 aa27.29■■□□□ 1.96
PCGF6-202ENST00000369847 ZEB1P37275 1124 aaPredicted RBP27.28■■□□□ 1.96
PCGF6-202ENST00000369847 WDR62O43379 1518 aa27.26■■□□□ 1.95
PCGF6-202ENST00000369847 RANGAP1P46060 587 aaPredicted RBP27.25■■□□□ 1.95
PCGF6-202ENST00000369847 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
PCGF6-202ENST00000369847 TDRD9Q8NDG6 1382 aaKnown RBP27.19■■□□□ 1.94
PCGF6-202ENST00000369847 CARMIL1Q5VZK9 1371 aa27.17■■□□□ 1.94
PCGF6-202ENST00000369847 TARBP1Q13395 1621 aaKnown RBP27.16■■□□□ 1.94
PCGF6-202ENST00000369847 ARHGAP35Q9NRY4 1499 aa27.15■■□□□ 1.94
PCGF6-202ENST00000369847 ABCA5Q8WWZ7 1642 aa27.1■■□□□ 1.93
PCGF6-202ENST00000369847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.09■■□□□ 1.93
PCGF6-202ENST00000369847 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
PCGF6-202ENST00000369847 CUL7Q14999 1698 aa27.01■■□□□ 1.91
PCGF6-202ENST00000369847 APLP2Q06481 763 aa27.01■■□□□ 1.91
PCGF6-202ENST00000369847 AQRO60306 1485 aaKnown RBP eCLIP27■■□□□ 1.91
PCGF6-202ENST00000369847 ZNF608Q9ULD9 1512 aaPredicted RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms