RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 NISCHQ9Y2I1 1504 aa35.21■■■■□ 3.23
SIPA1-209ENST00000534313 SHROOM4Q9ULL8 1493 aa30.67■■■□□ 2.5
SIPA1-209ENST00000534313 SUPT5HO00267 1087 aaKnown RBP30.13■■■□□ 2.41
SIPA1-209ENST00000534313 DCAF8L2P0C7V8 631 aa29.82■■■□□ 2.36
SIPA1-209ENST00000534313 ZCCHC6Q5VYS8 1495 aaKnown RBP29.76■■■□□ 2.35
SIPA1-209ENST00000534313 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
SIPA1-209ENST00000534313 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
SIPA1-209ENST00000534313 MYO15BQ96JP2 1530 aa29.03■■■□□ 2.24
SIPA1-209ENST00000534313 DCAF1Q9Y4B6 1507 aa28.62■■■□□ 2.17
SIPA1-209ENST00000534313 PCGF6Q9BYE7 350 aa28.53■■■□□ 2.16
SIPA1-209ENST00000534313 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
SIPA1-209ENST00000534313 HRCP23327 699 aa28.39■■■□□ 2.13
SIPA1-209ENST00000534313 SCRIBQ14160 1630 aa28.2■■■□□ 2.11
SIPA1-209ENST00000534313 PPARGC1BQ86YN6 1023 aaKnown RBP28.09■■■□□ 2.09
SIPA1-209ENST00000534313 ABCC9O60706 1549 aa28.08■■■□□ 2.08
SIPA1-209ENST00000534313 RSF1Q96T23 1441 aaPredicted RBP28.02■■■□□ 2.08
SIPA1-209ENST00000534313 FAM9AQ8IZU1 332 aaPredicted RBP27.93■■■□□ 2.06
SIPA1-209ENST00000534313 EHMT2Q96KQ7 1210 aa27.91■■■□□ 2.06
SIPA1-209ENST00000534313 TRIM41Q8WV44 630 aa27.88■■■□□ 2.05
SIPA1-209ENST00000534313 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
SIPA1-209ENST00000534313 TRIM26Q12899 539 aaPredicted RBP27.71■■■□□ 2.03
SIPA1-209ENST00000534313 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
SIPA1-209ENST00000534313 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
SIPA1-209ENST00000534313 NACADO15069 1562 aa27.46■■□□□ 1.99
SIPA1-209ENST00000534313 WIZO95785 1651 aa27.35■■□□□ 1.97
SIPA1-209ENST00000534313 ZEB1P37275 1124 aaPredicted RBP27.02■■□□□ 1.92
SIPA1-209ENST00000534313 BAZ1AQ9NRL2 1556 aaPredicted RBP27■■□□□ 1.91
SIPA1-209ENST00000534313 TTBK1Q5TCY1 1321 aaPredicted RBP26.99■■□□□ 1.91
SIPA1-209ENST00000534313 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
SIPA1-209ENST00000534313 PABPN1Q86U42 306 aaKnown RBP eCLIP26.88■■□□□ 1.89
SIPA1-209ENST00000534313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.84■■□□□ 1.89
SIPA1-209ENST00000534313 CCDC88BA6NC98 1476 aa26.83■■□□□ 1.88
SIPA1-209ENST00000534313 EIF4G1Q04637 1599 aaKnown RBP26.81■■□□□ 1.88
SIPA1-209ENST00000534313 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
SIPA1-209ENST00000534313 SMARCA4P51532 1647 aa26.76■■□□□ 1.88
SIPA1-209ENST00000534313 SOGA1O94964 1423 aa26.7■■□□□ 1.87
SIPA1-209ENST00000534313 CCER1Q8TC90 406 aaPredicted RBP26.69■■□□□ 1.86
SIPA1-209ENST00000534313 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
SIPA1-209ENST00000534313 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
SIPA1-209ENST00000534313 UBTFP17480 764 aaKnown RBP26.62■■□□□ 1.85
SIPA1-209ENST00000534313 PELP1Q8IZL8 1130 aaKnown RBP26.59■■□□□ 1.85
SIPA1-209ENST00000534313 RUSC2Q8N2Y8 1516 aa26.59■■□□□ 1.85
SIPA1-209ENST00000534313 CEP162Q5TB80 1403 aa26.55■■□□□ 1.84
SIPA1-209ENST00000534313 CSRNP3Q8WYN3 585 aa26.53■■□□□ 1.84
SIPA1-209ENST00000534313 TNIKQ9UKE5 1360 aa26.4■■□□□ 1.82
SIPA1-209ENST00000534313 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
SIPA1-209ENST00000534313 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
SIPA1-209ENST00000534313 WRNQ14191 1432 aaPredicted RBP eCLIP26.35■■□□□ 1.81
SIPA1-209ENST00000534313 SCAF1Q9H7N4 1312 aaKnown RBP26.34■■□□□ 1.81
SIPA1-209ENST00000534313 EEA1Q15075 1411 aa26.25■■□□□ 1.79
SIPA1-209ENST00000534313 GOLGA3Q08378 1498 aa26.23■■□□□ 1.79
SIPA1-209ENST00000534313 HNRNPUL2Q1KMD3 747 aaKnown RBP26.18■■□□□ 1.78
SIPA1-209ENST00000534313 DIEXFQ68CQ4 756 aaKnown RBP26.17■■□□□ 1.78
SIPA1-209ENST00000534313 SYNJ1O43426 1573 aa26.17■■□□□ 1.78
SIPA1-209ENST00000534313 ATAD2BQ9ULI0 1458 aa26.13■■□□□ 1.77
SIPA1-209ENST00000534313 BAZ1BQ9UIG0 1483 aaKnown RBP26.1■■□□□ 1.77
SIPA1-209ENST00000534313 PEG3Q9GZU2 1588 aa26.06■■□□□ 1.76
SIPA1-209ENST00000534313 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
SIPA1-209ENST00000534313 NEUROD1Q13562 356 aa26.04■■□□□ 1.76
SIPA1-209ENST00000534313 CLIP1P30622 1438 aa26.04■■□□□ 1.76
SIPA1-209ENST00000534313 RAPGEF2Q9Y4G8 1499 aa25.99■■□□□ 1.75
SIPA1-209ENST00000534313 APLP2Q06481 763 aa25.97■■□□□ 1.75
SIPA1-209ENST00000534313 ACIN1Q9UKV3 1341 aaKnown RBP25.97■■□□□ 1.75
SIPA1-209ENST00000534313 KIF21BO75037 1637 aa25.89■■□□□ 1.73
SIPA1-209ENST00000534313 ZNF316A6NFI3 1004 aaPredicted RBP25.87■■□□□ 1.73
SIPA1-209ENST00000534313 CENPBP07199 599 aaPredicted RBP25.87■■□□□ 1.73
SIPA1-209ENST00000534313 VPS8Q8N3P4 1428 aa25.86■■□□□ 1.73
SIPA1-209ENST00000534313 GTF3C3Q9Y5Q9 886 aa25.85■■□□□ 1.73
SIPA1-209ENST00000534313 YTHDC1Q96MU7 727 aaKnown RBP25.81■■□□□ 1.72
SIPA1-209ENST00000534313 TOP2BQ02880 1626 aa25.7■■□□□ 1.71
SIPA1-209ENST00000534313 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
SIPA1-209ENST00000534313 MIER1Q8N108 512 aa25.65■■□□□ 1.7
SIPA1-209ENST00000534313 CUX1P39880 1505 aa25.56■■□□□ 1.68
SIPA1-209ENST00000534313 PRXQ9BXM0 1461 aa25.55■■□□□ 1.68
SIPA1-209ENST00000534313 ARAP1Q96P48 1450 aa25.54■■□□□ 1.68
SIPA1-209ENST00000534313 ITGAEP38570 1179 aa25.54■■□□□ 1.68
SIPA1-209ENST00000534313 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
SIPA1-209ENST00000534313 NCAPD3P42695 1498 aa25.5■■□□□ 1.67
SIPA1-209ENST00000534313 KIF27Q86VH2 1401 aa25.48■■□□□ 1.67
SIPA1-209ENST00000534313 MYT1Q01538 1121 aa25.45■■□□□ 1.66
SIPA1-209ENST00000534313 ERICH3Q5RHP9 1530 aa25.44■■□□□ 1.66
SIPA1-209ENST00000534313 HMGXB3Q12766 1538 aa25.41■■□□□ 1.66
SIPA1-209ENST00000534313 DHX57Q6P158 1386 aaKnown RBP25.4■■□□□ 1.66
SIPA1-209ENST00000534313 CFTRP13569 1480 aa25.38■■□□□ 1.65
SIPA1-209ENST00000534313 ARHGAP35Q9NRY4 1499 aa25.32■■□□□ 1.64
SIPA1-209ENST00000534313 CUX2O14529 1486 aa25.31■■□□□ 1.64
SIPA1-209ENST00000534313 P3H3Q8IVL6 736 aa25.29■■□□□ 1.64
SIPA1-209ENST00000534313 ATP1B4Q9UN42 357 aaPredicted RBP25.27■■□□□ 1.64
SIPA1-209ENST00000534313 IGF1RP08069 1367 aa25.25■■□□□ 1.63
SIPA1-209ENST00000534313 CCNB3Q8WWL7 1395 aa25.24■■□□□ 1.63
SIPA1-209ENST00000534313 RRBP1Q9P2E9 1410 aaKnown RBP25.21■■□□□ 1.63
SIPA1-209ENST00000534313 CLSPNQ9HAW4 1339 aa25.17■■□□□ 1.62
SIPA1-209ENST00000534313 CARMIL1Q5VZK9 1371 aa25.17■■□□□ 1.62
SIPA1-209ENST00000534313 CADPSQ9ULU8 1353 aa25.15■■□□□ 1.62
SIPA1-209ENST00000534313 FGD5Q6ZNL6 1462 aa25.13■■□□□ 1.61
SIPA1-209ENST00000534313 FAM50AQ14320 339 aaKnown RBP25.13■■□□□ 1.61
SIPA1-209ENST00000534313 RAB3GAP2Q9H2M9 1393 aa25.08■■□□□ 1.61
SIPA1-209ENST00000534313 PHLDB1Q86UU1 1377 aa25.01■■□□□ 1.59
SIPA1-209ENST00000534313 SIN3AQ96ST3 1273 aa25■■□□□ 1.59
SIPA1-209ENST00000534313 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms